Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AP000553.5-201ENST00000641933 54 ntBASIC2.07□□□□□ -2.08
ZNF549Q6P9A3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
ZNF549Q6P9A3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
ZNF549Q6P9A3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
ZNF549Q6P9A3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
ZNF549Q6P9A3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.06□□□□□ -2.08
ZNF549Q6P9A3 Y_RNA.357-201ENST00000365487 109 ntBASIC2.06□□□□□ -2.08
ZNF549Q6P9A3 MIR569-201ENST00000385228 96 ntBASIC2.06□□□□□ -2.08
ZNF549Q6P9A3 SNORA11.4-201ENST00000408823 129 ntBASIC2.06□□□□□ -2.08
ZNF549Q6P9A3 RNA5SP338-201ENST00000410495 85 ntBASIC2.06□□□□□ -2.08
ZNF549Q6P9A3 AC003685.2-201ENST00000422795 395 ntBASIC2.06□□□□□ -2.08
ZNF549Q6P9A3 AL162725.1-201ENST00000435405 301 ntBASIC2.06□□□□□ -2.08
ZNF549Q6P9A3 HSPE1P21-201ENST00000438283 308 ntBASIC2.06□□□□□ -2.08
ZNF549Q6P9A3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.06□□□□□ -2.08
ZNF549Q6P9A3 AL357134.1-201ENST00000445848 426 ntBASIC2.06□□□□□ -2.08
ZNF549Q6P9A3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.06□□□□□ -2.08
ZNF549Q6P9A3 RNU2-34P-201ENST00000516534 121 ntBASIC2.06□□□□□ -2.08
ZNF549Q6P9A3 RNU6-1007P-201ENST00000516586 107 ntBASIC2.06□□□□□ -2.08
ZNF549Q6P9A3 RNU1-104P-201ENST00000517280 175 ntBASIC2.06□□□□□ -2.08
ZNF549Q6P9A3 IGLV3-17-201ENST00000519099 244 ntBASIC2.06□□□□□ -2.08
ZNF549Q6P9A3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.06□□□□□ -2.08
ZNF549Q6P9A3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.06□□□□□ -2.08
ZNF549Q6P9A3 MIR4724-201ENST00000579485 89 ntBASIC2.06□□□□□ -2.08
ZNF549Q6P9A3 AC005972.2-201ENST00000604690 348 ntBASIC2.06□□□□□ -2.08
ZNF549Q6P9A3 AP001485.1-201ENST00000604799 199 ntBASIC2.06□□□□□ -2.08
ZNF549Q6P9A3 AL021707.8-201ENST00000609428 183 ntBASIC2.06□□□□□ -2.08
ZNF549Q6P9A3 MIR6895-201ENST00000613497 78 ntBASIC2.06□□□□□ -2.08
ZNF549Q6P9A3 Y_RNA.778-201ENST00000620203 90 ntBASIC2.06□□□□□ -2.08
ZNF549Q6P9A3 MIR3658-201ENST00000636291 56 ntBASIC2.06□□□□□ -2.08
ZNF549Q6P9A3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
ZNF549Q6P9A3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 SNORA38-201ENST00000363946 132 ntBASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 RNU6-151P-201ENST00000364158 107 ntBASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 SNORA67.1-201ENST00000364749 141 ntBASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 Y_RNA.291-201ENST00000364886 113 ntBASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 RNU6-1240P-201ENST00000365155 104 ntBASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 RNU6-438P-201ENST00000365561 103 ntBASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 SNORA70B-201ENST00000384210 135 ntBASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 SNORA67.3-201ENST00000384366 140 ntBASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 SNORA64-201ENST00000384674 134 ntBASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 AL606845.1-201ENST00000404881 255 ntBASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 RNA5SP511-201ENST00000410487 115 ntBASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 Z98742.3-201ENST00000418637 326 ntBASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 AC123900.1-201ENST00000420390 96 ntBASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 AL137159.1-201ENST00000452808 512 ntBASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 AC025033.1-201ENST00000463883 194 ntBASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 RNU6-991P-201ENST00000516168 107 ntBASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 RNU6-426P-201ENST00000516464 97 ntBASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 RNU1-40P-201ENST00000516816 164 ntBASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 RNU1-97P-201ENST00000516872 164 ntBASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 RNU6-856P-201ENST00000516959 98 ntBASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 IGKV3-31-201ENST00000523109 329 ntBASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 POLR3GP1-201ENST00000594073 261 ntBASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 U2.20-201ENST00000613956 192 ntBASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
ZNF549Q6P9A3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
ZNF549Q6P9A3 ZNF658B-202ENST00000615961 3375 ntBASIC2.04□□□□□ -2.08
ZNF549Q6P9A3 RNU1-22P-201ENST00000363334 158 ntBASIC2.04□□□□□ -2.08
ZNF549Q6P9A3 RNU6-674P-201ENST00000363831 107 ntBASIC2.04□□□□□ -2.08
ZNF549Q6P9A3 RNU6-743P-201ENST00000364151 106 ntBASIC2.04□□□□□ -2.08
ZNF549Q6P9A3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.04□□□□□ -2.08
ZNF549Q6P9A3 Y_RNA.488-201ENST00000384403 102 ntBASIC2.04□□□□□ -2.08
ZNF549Q6P9A3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
ZNF549Q6P9A3 RNU6-1228P-201ENST00000391014 107 ntBASIC2.04□□□□□ -2.08
ZNF549Q6P9A3 Y_RNA.586-201ENST00000391146 98 ntBASIC2.04□□□□□ -2.08
ZNF549Q6P9A3 SNORA3.2-201ENST00000408221 125 ntBASIC2.04□□□□□ -2.08
ZNF549Q6P9A3 RNA5SP425-201ENST00000410336 112 ntBASIC2.04□□□□□ -2.08
ZNF549Q6P9A3 AC008134.1-201ENST00000420943 193 ntBASIC2.04□□□□□ -2.08
ZNF549Q6P9A3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.04□□□□□ -2.08
ZNF549Q6P9A3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.04□□□□□ -2.08
ZNF549Q6P9A3 AC010409.1-201ENST00000487382 476 ntBASIC2.04□□□□□ -2.08
ZNF549Q6P9A3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.04□□□□□ -2.08
ZNF549Q6P9A3 RNA5SP272-201ENST00000516095 111 ntBASIC2.04□□□□□ -2.08
ZNF549Q6P9A3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.04□□□□□ -2.08
ZNF549Q6P9A3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.04□□□□□ -2.08
ZNF549Q6P9A3 MIR6873-201ENST00000622788 63 ntBASIC2.04□□□□□ -2.08
ZNF549Q6P9A3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
ZNF549Q6P9A3 CENPCP1-201ENST00000533085 2578 ntBASIC2.04□□□□□ -2.08
ZNF549Q6P9A3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
ZNF549Q6P9A3 MIR367-201ENST00000362299 68 ntBASIC2.03□□□□□ -2.08
ZNF549Q6P9A3 U8.2-201ENST00000363156 134 ntBASIC2.03□□□□□ -2.08
ZNF549Q6P9A3 Y_RNA.497-201ENST00000384447 98 ntBASIC2.03□□□□□ -2.08
ZNF549Q6P9A3 RNU6-257P-201ENST00000410238 98 ntBASIC2.03□□□□□ -2.08
ZNF549Q6P9A3 RNU4-43P-201ENST00000410628 137 ntBASIC2.03□□□□□ -2.08
ZNF549Q6P9A3 RN7SKP101-201ENST00000411376 320 ntBASIC2.03□□□□□ -2.08
ZNF549Q6P9A3 AC060773.1-201ENST00000421698 310 ntBASIC2.03□□□□□ -2.08
ZNF549Q6P9A3 AL356320.1-201ENST00000429616 163 ntBASIC2.03□□□□□ -2.08
ZNF549Q6P9A3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.03□□□□□ -2.08
ZNF549Q6P9A3 CYP2C59P-201ENST00000457790 269 ntBASIC2.03□□□□□ -2.08
ZNF549Q6P9A3 AC107027.2-201ENST00000512197 115 ntBASIC2.03□□□□□ -2.08
ZNF549Q6P9A3 AC097462.1-201ENST00000514125 324 ntBASIC2.03□□□□□ -2.08
ZNF549Q6P9A3 RNU7-116P-201ENST00000516940 62 ntBASIC2.03□□□□□ -2.08
ZNF549Q6P9A3 AC121758.2-201ENST00000553271 193 ntBASIC2.03□□□□□ -2.08
ZNF549Q6P9A3 MIR1273D-201ENST00000577266 86 ntBASIC2.03□□□□□ -2.08
ZNF549Q6P9A3 MIR4658-201ENST00000584344 65 ntBASIC2.03□□□□□ -2.08
ZNF549Q6P9A3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms