Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AL023284.1-201ENST00000403956 276 ntBASIC1.54□□□□□ -2.16
CMTM3Q96MX0 MIR1252-201ENST00000408861 65 ntBASIC1.54□□□□□ -2.16
CMTM3Q96MX0 RNU2-2P-201ENST00000410396 191 ntBASIC1.54□□□□□ -2.16
CMTM3Q96MX0 RN7SKP223-201ENST00000410582 62 ntBASIC1.54□□□□□ -2.16
CMTM3Q96MX0 SNX2P2-201ENST00000424553 323 ntBASIC1.54□□□□□ -2.16
CMTM3Q96MX0 AC024067.1-201ENST00000426199 223 ntBASIC1.54□□□□□ -2.16
CMTM3Q96MX0 AC019176.1-201ENST00000518519 225 ntBASIC1.54□□□□□ -2.16
CMTM3Q96MX0 AC005972.2-201ENST00000604690 348 ntBASIC1.54□□□□□ -2.16
CMTM3Q96MX0 AC004832.4-201ENST00000608952 331 ntBASIC1.54□□□□□ -2.16
CMTM3Q96MX0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.54□□□□□ -2.16
CMTM3Q96MX0 AL161722.3-201ENST00000605789 2983 ntBASIC1.54□□□□□ -2.16
CMTM3Q96MX0 Y_RNA.389-201ENST00000383924 113 ntBASIC1.53□□□□□ -2.16
CMTM3Q96MX0 SNORA70B-201ENST00000384210 135 ntBASIC1.53□□□□□ -2.16
CMTM3Q96MX0 RNU6-424P-201ENST00000384367 105 ntBASIC1.53□□□□□ -2.16
CMTM3Q96MX0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.53□□□□□ -2.16
CMTM3Q96MX0 SNORA3.2-201ENST00000408221 125 ntBASIC1.53□□□□□ -2.16
CMTM3Q96MX0 RNU4-30P-201ENST00000410245 143 ntBASIC1.53□□□□□ -2.16
CMTM3Q96MX0 RPS27P16-201ENST00000425758 201 ntBASIC1.53□□□□□ -2.16
CMTM3Q96MX0 CALM2P4-201ENST00000430810 426 ntBASIC1.53□□□□□ -2.16
CMTM3Q96MX0 RPS20P10-201ENST00000451209 253 ntBASIC1.53□□□□□ -2.16
CMTM3Q96MX0 RPS29P23-201ENST00000458635 123 ntBASIC1.53□□□□□ -2.16
CMTM3Q96MX0 SEPT14P8-201ENST00000508026 178 ntBASIC1.53□□□□□ -2.16
CMTM3Q96MX0 MIR4648-201ENST00000580107 72 ntBASIC1.53□□□□□ -2.16
CMTM3Q96MX0 MIR3171-201ENST00000584270 74 ntBASIC1.53□□□□□ -2.16
CMTM3Q96MX0 SNORD113-5-201ENST00000607261 78 ntBASIC1.53□□□□□ -2.16
CMTM3Q96MX0 AL365434.2-201ENST00000607979 234 ntBASIC1.53□□□□□ -2.16
CMTM3Q96MX0 AL121890.5-201ENST00000620848 304 ntBASIC1.53□□□□□ -2.16
CMTM3Q96MX0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
CMTM3Q96MX0 Y_RNA.11-201ENST00000362375 109 ntBASIC1.52□□□□□ -2.17
CMTM3Q96MX0 Y_RNA.183-201ENST00000363882 113 ntBASIC1.52□□□□□ -2.17
CMTM3Q96MX0 RNU4-41P-201ENST00000364426 143 ntBASIC1.52□□□□□ -2.17
CMTM3Q96MX0 RNU6-450P-201ENST00000364654 107 ntBASIC1.52□□□□□ -2.17
CMTM3Q96MX0 AC117470.1-201ENST00000381974 330 ntBASIC1.52□□□□□ -2.17
CMTM3Q96MX0 SNORA64-201ENST00000384674 134 ntBASIC1.52□□□□□ -2.17
CMTM3Q96MX0 U8.16-201ENST00000391279 133 ntBASIC1.52□□□□□ -2.17
CMTM3Q96MX0 RNU6-855P-201ENST00000410395 104 ntBASIC1.52□□□□□ -2.17
CMTM3Q96MX0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CMTM3Q96MX0 Z98949.2-201ENST00000440996 144 ntBASIC1.52□□□□□ -2.17
CMTM3Q96MX0 RNU6-1046P-201ENST00000516538 107 ntBASIC1.52□□□□□ -2.17
CMTM3Q96MX0 AC020661.2-201ENST00000560114 134 ntBASIC1.52□□□□□ -2.17
CMTM3Q96MX0 AC136932.1-201ENST00000574771 208 ntBASIC1.52□□□□□ -2.17
CMTM3Q96MX0 DEFB117-201ENST00000602356 141 ntBASIC1.52□□□□□ -2.17
CMTM3Q96MX0 SNRPGP19-201ENST00000603826 189 ntBASIC1.52□□□□□ -2.17
CMTM3Q96MX0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.52□□□□□ -2.17
CMTM3Q96MX0 Y_RNA.158-201ENST00000363651 101 ntBASIC1.51□□□□□ -2.17
CMTM3Q96MX0 Y_RNA.368-201ENST00000365547 113 ntBASIC1.51□□□□□ -2.17
CMTM3Q96MX0 Y_RNA.380-201ENST00000365663 111 ntBASIC1.51□□□□□ -2.17
CMTM3Q96MX0 Y_RNA.621-201ENST00000411065 96 ntBASIC1.51□□□□□ -2.17
CMTM3Q96MX0 RNU1-98P-201ENST00000458992 160 ntBASIC1.51□□□□□ -2.17
CMTM3Q96MX0 RNU6-397P-201ENST00000516226 104 ntBASIC1.51□□□□□ -2.17
CMTM3Q96MX0 Y_RNA.701-201ENST00000516812 110 ntBASIC1.51□□□□□ -2.17
CMTM3Q96MX0 RNU6-897P-201ENST00000517135 105 ntBASIC1.51□□□□□ -2.17
CMTM3Q96MX0 AC011604.1-201ENST00000545978 196 ntBASIC1.51□□□□□ -2.17
CMTM3Q96MX0 AL078604.3-201ENST00000615580 211 ntBASIC1.51□□□□□ -2.17
CMTM3Q96MX0 MIRLET7C-201ENST00000362160 84 ntBASIC1.5□□□□□ -2.17
CMTM3Q96MX0 RNU4-76P-201ENST00000364509 141 ntBASIC1.5□□□□□ -2.17
CMTM3Q96MX0 Y_RNA.310-201ENST00000365063 113 ntBASIC1.5□□□□□ -2.17
CMTM3Q96MX0 RNA5SP363-201ENST00000365072 115 ntBASIC1.5□□□□□ -2.17
CMTM3Q96MX0 Y_RNA.341-201ENST00000365341 102 ntBASIC1.5□□□□□ -2.17
CMTM3Q96MX0 RNU6-1080P-201ENST00000383982 107 ntBASIC1.5□□□□□ -2.17
CMTM3Q96MX0 Y_RNA.456-201ENST00000384232 111 ntBASIC1.5□□□□□ -2.17
CMTM3Q96MX0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.5□□□□□ -2.17
CMTM3Q96MX0 AC010655.3-201ENST00000478818 450 ntBASIC1.5□□□□□ -2.17
CMTM3Q96MX0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.5□□□□□ -2.17
CMTM3Q96MX0 AP001485.1-201ENST00000604799 199 ntBASIC1.5□□□□□ -2.17
CMTM3Q96MX0 RAC1P9-201ENST00000604990 392 ntBASIC1.5□□□□□ -2.17
CMTM3Q96MX0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.5□□□□□ -2.17
CMTM3Q96MX0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.5□□□□□ -2.17
CMTM3Q96MX0 Y_RNA.202-201ENST00000364083 110 ntBASIC1.49□□□□□ -2.17
CMTM3Q96MX0 Y_RNA.216-201ENST00000364205 93 ntBASIC1.49□□□□□ -2.17
CMTM3Q96MX0 Y_RNA.383-201ENST00000383855 97 ntBASIC1.49□□□□□ -2.17
CMTM3Q96MX0 SNORA72-201ENST00000384339 132 ntBASIC1.49□□□□□ -2.17
CMTM3Q96MX0 RNU6-1105P-201ENST00000384774 107 ntBASIC1.49□□□□□ -2.17
CMTM3Q96MX0 SNORD115-46-201ENST00000390982 71 ntBASIC1.49□□□□□ -2.17
CMTM3Q96MX0 RPL39P38-201ENST00000467018 153 ntBASIC1.49□□□□□ -2.17
CMTM3Q96MX0 HMGN1P10-201ENST00000474557 553 ntBASIC1.49□□□□□ -2.17
CMTM3Q96MX0 RNU7-12P-201ENST00000516030 62 ntBASIC1.49□□□□□ -2.17
CMTM3Q96MX0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.49□□□□□ -2.17
CMTM3Q96MX0 MIR4778-201ENST00000577635 80 ntBASIC1.49□□□□□ -2.17
CMTM3Q96MX0 MIR4300-201ENST00000581016 96 ntBASIC1.49□□□□□ -2.17
CMTM3Q96MX0 MIR376A1-201ENST00000616574 68 ntBASIC1.49□□□□□ -2.17
CMTM3Q96MX0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CMTM3Q96MX0 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
CMTM3Q96MX0 RNU6-199P-201ENST00000362954 107 ntBASIC1.48□□□□□ -2.17
CMTM3Q96MX0 Y_RNA.286-201ENST00000364813 102 ntBASIC1.48□□□□□ -2.17
CMTM3Q96MX0 RNU6-1323P-201ENST00000384025 107 ntBASIC1.48□□□□□ -2.17
CMTM3Q96MX0 AL135790.2-201ENST00000437701 267 ntBASIC1.48□□□□□ -2.17
CMTM3Q96MX0 POLR2KP2-201ENST00000438155 177 ntBASIC1.48□□□□□ -2.17
CMTM3Q96MX0 MTCYBP6-201ENST00000441810 138 ntBASIC1.48□□□□□ -2.17
CMTM3Q96MX0 U8.19-201ENST00000459095 133 ntBASIC1.48□□□□□ -2.17
CMTM3Q96MX0 RPL23AP94-201ENST00000512518 302 ntBASIC1.48□□□□□ -2.17
CMTM3Q96MX0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.48□□□□□ -2.17
CMTM3Q96MX0 AL513534.2-201ENST00000603836 250 ntBASIC1.48□□□□□ -2.17
CMTM3Q96MX0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.48□□□□□ -2.17
CMTM3Q96MX0 AC106754.2-201ENST00000623006 233 ntBASIC1.48□□□□□ -2.17
CMTM3Q96MX0 SNORD113-8-201ENST00000363497 74 ntBASIC1.47□□□□□ -2.17
CMTM3Q96MX0 Y_RNA.222-201ENST00000364264 102 ntBASIC1.47□□□□□ -2.17
CMTM3Q96MX0 Y_RNA.455-201ENST00000384230 98 ntBASIC1.47□□□□□ -2.17
CMTM3Q96MX0 AC092991.1-201ENST00000477176 376 ntBASIC1.47□□□□□ -2.17
CMTM3Q96MX0 RNU7-116P-201ENST00000516940 62 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 233.4 ms