Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC114982.1-201ENST00000469402 321 ntBASIC2.04□□□□□ -2.08
PKP4Q99569 MRPS17P9-201ENST00000511924 393 ntBASIC2.04□□□□□ -2.08
PKP4Q99569 SNORD116-28-201ENST00000516123 91 ntBASIC2.04□□□□□ -2.08
PKP4Q99569 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.04□□□□□ -2.08
PKP4Q99569 AC004792.1-201ENST00000614523 137 ntBASIC2.04□□□□□ -2.08
PKP4Q99569 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.04□□□□□ -2.08
PKP4Q99569 MIR411-201ENST00000362239 96 ntBASIC2.03□□□□□ -2.08
PKP4Q99569 AL031003.1-201ENST00000404229 172 ntBASIC2.03□□□□□ -2.08
PKP4Q99569 MIR1262-201ENST00000408276 93 ntBASIC2.03□□□□□ -2.08
PKP4Q99569 MIR1283-2-201ENST00000408621 87 ntBASIC2.03□□□□□ -2.08
PKP4Q99569 MIR1185-2-201ENST00000408687 86 ntBASIC2.03□□□□□ -2.08
PKP4Q99569 RNU2-40P-201ENST00000410833 196 ntBASIC2.03□□□□□ -2.08
PKP4Q99569 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.03□□□□□ -2.08
PKP4Q99569 SUMO1P2-201ENST00000452524 304 ntBASIC2.03□□□□□ -2.08
PKP4Q99569 Y_RNA.644-201ENST00000459006 113 ntBASIC2.03□□□□□ -2.08
PKP4Q99569 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
PKP4Q99569 Y_RNA.674-201ENST00000516362 113 ntBASIC2.03□□□□□ -2.08
PKP4Q99569 MIR3684-201ENST00000579779 74 ntBASIC2.03□□□□□ -2.08
PKP4Q99569 MIR4448-201ENST00000584360 86 ntBASIC2.03□□□□□ -2.08
PKP4Q99569 MIR4753-201ENST00000585119 83 ntBASIC2.03□□□□□ -2.08
PKP4Q99569 AC104984.5-201ENST00000586878 94 ntBASIC2.03□□□□□ -2.08
PKP4Q99569 Z83818.1-201ENST00000603584 150 ntBASIC2.03□□□□□ -2.08
PKP4Q99569 AC011921.3-201ENST00000605540 361 ntBASIC2.03□□□□□ -2.08
PKP4Q99569 AC005828.6-201ENST00000606610 232 ntBASIC2.03□□□□□ -2.08
PKP4Q99569 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.03□□□□□ -2.08
PKP4Q99569 AC073349.3-201ENST00000617616 186 ntBASIC2.03□□□□□ -2.08
PKP4Q99569 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
PKP4Q99569 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
PKP4Q99569 Y_RNA.99-201ENST00000363138 105 ntBASIC2.02□□□□□ -2.09
PKP4Q99569 SNORD31B-201ENST00000364977 69 ntBASIC2.02□□□□□ -2.09
PKP4Q99569 RNU4-70P-201ENST00000384579 139 ntBASIC2.02□□□□□ -2.09
PKP4Q99569 Y_RNA.555-201ENST00000384673 110 ntBASIC2.02□□□□□ -2.09
PKP4Q99569 Y_RNA.793-201ENST00000411222 111 ntBASIC2.02□□□□□ -2.09
PKP4Q99569 AL121890.1-201ENST00000435457 205 ntBASIC2.02□□□□□ -2.09
PKP4Q99569 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.02□□□□□ -2.09
PKP4Q99569 CBX3P4-201ENST00000538909 354 ntBASIC2.02□□□□□ -2.09
PKP4Q99569 MIR4299-201ENST00000577899 72 ntBASIC2.02□□□□□ -2.09
PKP4Q99569 AL773524.1-201ENST00000614065 229 ntBASIC2.02□□□□□ -2.09
PKP4Q99569 FTX_2.1-201ENST00000618816 94 ntBASIC2.02□□□□□ -2.09
PKP4Q99569 U6.115-201ENST00000636045 103 ntBASIC2.02□□□□□ -2.09
PKP4Q99569 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.02□□□□□ -2.09
PKP4Q99569 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
PKP4Q99569 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.02□□□□□ -2.09
PKP4Q99569 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
PKP4Q99569 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
PKP4Q99569 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.01□□□□□ -2.09
PKP4Q99569 MIR1261-201ENST00000408659 82 ntBASIC2.01□□□□□ -2.09
PKP4Q99569 RNU6-710P-201ENST00000410424 105 ntBASIC2.01□□□□□ -2.09
PKP4Q99569 RNU7-57P-201ENST00000459540 60 ntBASIC2.01□□□□□ -2.09
PKP4Q99569 ATP5EP1-201ENST00000510257 156 ntBASIC2.01□□□□□ -2.09
PKP4Q99569 IGKV3-31-201ENST00000523109 329 ntBASIC2.01□□□□□ -2.09
PKP4Q99569 AC024405.2-202ENST00000532731 184 ntBASIC2.01□□□□□ -2.09
PKP4Q99569 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.01□□□□□ -2.09
PKP4Q99569 AC002984.1-201ENST00000591692 448 ntBASIC2.01□□□□□ -2.09
PKP4Q99569 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.01□□□□□ -2.09
PKP4Q99569 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
PKP4Q99569 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.01□□□□□ -2.09
PKP4Q99569 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
PKP4Q99569 RNA5SP276-201ENST00000362580 94 ntBASIC2□□□□□ -2.09
PKP4Q99569 RNU6-1272P-201ENST00000362776 107 ntBASIC2□□□□□ -2.09
PKP4Q99569 RNA5SP160-201ENST00000364866 120 ntBASIC2□□□□□ -2.09
PKP4Q99569 Y_RNA.361-201ENST00000365515 120 ntBASIC2□□□□□ -2.09
PKP4Q99569 RNU6-438P-201ENST00000365561 103 ntBASIC2□□□□□ -2.09
PKP4Q99569 RNU6-975P-201ENST00000384296 105 ntBASIC2□□□□□ -2.09
PKP4Q99569 SNORA8-201ENST00000384574 139 ntBASIC2□□□□□ -2.09
PKP4Q99569 AC244636.1-201ENST00000421152 228 ntBASIC2□□□□□ -2.09
PKP4Q99569 AL021397.1-201ENST00000451806 248 ntBASIC2□□□□□ -2.09
PKP4Q99569 AC016925.1-201ENST00000458303 298 ntBASIC2□□□□□ -2.09
PKP4Q99569 YWHAEP4-201ENST00000505390 198 ntBASIC2□□□□□ -2.09
PKP4Q99569 SNORA70.12-201ENST00000516084 153 ntBASIC2□□□□□ -2.09
PKP4Q99569 RNU6-965P-201ENST00000516721 96 ntBASIC2□□□□□ -2.09
PKP4Q99569 AP005660.1-201ENST00000522972 293 ntBASIC2□□□□□ -2.09
PKP4Q99569 Y_RNA.783-201ENST00000613546 102 ntBASIC2□□□□□ -2.09
PKP4Q99569 snoZ196.1-201ENST00000625269 89 ntBASIC2□□□□□ -2.09
PKP4Q99569 snoU18.1-201ENST00000629629 71 ntBASIC2□□□□□ -2.09
PKP4Q99569 MIR219B-201ENST00000637023 88 ntBASIC2□□□□□ -2.09
PKP4Q99569 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
PKP4Q99569 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
PKP4Q99569 RNU6-1020P-201ENST00000363684 107 ntBASIC1.99□□□□□ -2.09
PKP4Q99569 Y_RNA.270-201ENST00000364693 104 ntBASIC1.99□□□□□ -2.09
PKP4Q99569 Y_RNA.304-201ENST00000365011 112 ntBASIC1.99□□□□□ -2.09
PKP4Q99569 RNU6-211P-201ENST00000384047 107 ntBASIC1.99□□□□□ -2.09
PKP4Q99569 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
PKP4Q99569 RNA5SP212-201ENST00000391223 107 ntBASIC1.99□□□□□ -2.09
PKP4Q99569 AL357139.1-201ENST00000407792 426 ntBASIC1.99□□□□□ -2.09
PKP4Q99569 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
PKP4Q99569 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.99□□□□□ -2.09
PKP4Q99569 RPL23AP7-203ENST00000449021 469 ntBASIC1.99□□□□□ -2.09
PKP4Q99569 HMGN2P18-201ENST00000450680 270 ntBASIC1.99□□□□□ -2.09
PKP4Q99569 RNU7-120P-201ENST00000459334 63 ntBASIC1.99□□□□□ -2.09
PKP4Q99569 RNU6-221P-201ENST00000459541 99 ntBASIC1.99□□□□□ -2.09
PKP4Q99569 UBL5P3-201ENST00000475112 231 ntBASIC1.99□□□□□ -2.09
PKP4Q99569 AC136628.3-201ENST00000521868 290 ntBASIC1.99□□□□□ -2.09
PKP4Q99569 AP002392.1-201ENST00000537692 208 ntBASIC1.99□□□□□ -2.09
PKP4Q99569 MIR4648-201ENST00000580107 72 ntBASIC1.99□□□□□ -2.09
PKP4Q99569 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.99□□□□□ -2.09
PKP4Q99569 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.99□□□□□ -2.09
PKP4Q99569 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.99□□□□□ -2.09
PKP4Q99569 AL078604.3-201ENST00000615580 211 ntBASIC1.99□□□□□ -2.09
PKP4Q99569 U1.36-201ENST00000620684 176 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 199.1 ms