Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 AC114811.1-201ENST00000507207 168 ntBASIC0.13□□□□□ -2.39
LRRC39Q96DD0 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.13□□□□□ -2.39
LRRC39Q96DD0 RNU7-175P-201ENST00000515915 61 ntBASIC0.13□□□□□ -2.39
LRRC39Q96DD0 MTND2P38-201ENST00000522536 667 ntBASIC0.13□□□□□ -2.39
LRRC39Q96DD0 MIR4431-201ENST00000579990 94 ntBASIC0.13□□□□□ -2.39
LRRC39Q96DD0 AL050303.3-201ENST00000613704 284 ntBASIC0.13□□□□□ -2.39
LRRC39Q96DD0 Z69908.1-201ENST00000622603 247 ntBASIC0.13□□□□□ -2.39
LRRC39Q96DD0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
LRRC39Q96DD0 MIR103A1-201ENST00000362165 78 ntBASIC0.12□□□□□ -2.39
LRRC39Q96DD0 RNU6-369P-201ENST00000362515 102 ntBASIC0.12□□□□□ -2.39
LRRC39Q96DD0 RNU6-654P-201ENST00000364373 107 ntBASIC0.12□□□□□ -2.39
LRRC39Q96DD0 Y_RNA.381-201ENST00000365666 102 ntBASIC0.12□□□□□ -2.39
LRRC39Q96DD0 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.12□□□□□ -2.39
LRRC39Q96DD0 SNORA62.5-201ENST00000516634 120 ntBASIC0.12□□□□□ -2.39
LRRC39Q96DD0 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.12□□□□□ -2.39
LRRC39Q96DD0 AC093027.1-201ENST00000546698 429 ntBASIC0.12□□□□□ -2.39
LRRC39Q96DD0 MIR4528-201ENST00000577763 90 ntBASIC0.12□□□□□ -2.39
LRRC39Q96DD0 MIR5696-201ENST00000578474 85 ntBASIC0.12□□□□□ -2.39
LRRC39Q96DD0 MIR4514-201ENST00000581410 57 ntBASIC0.12□□□□□ -2.39
LRRC39Q96DD0 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.12□□□□□ -2.39
LRRC39Q96DD0 MIR410-201ENST00000362222 80 ntBASIC0.11□□□□□ -2.39
LRRC39Q96DD0 RNU6-1322P-201ENST00000364309 107 ntBASIC0.11□□□□□ -2.39
LRRC39Q96DD0 RNU4-20P-201ENST00000365601 151 ntBASIC0.11□□□□□ -2.39
LRRC39Q96DD0 Y_RNA.481-201ENST00000384373 102 ntBASIC0.11□□□□□ -2.39
LRRC39Q96DD0 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.11□□□□□ -2.39
LRRC39Q96DD0 RNU6-1114P-201ENST00000516022 107 ntBASIC0.11□□□□□ -2.39
LRRC39Q96DD0 AC005828.6-201ENST00000606610 232 ntBASIC0.11□□□□□ -2.39
LRRC39Q96DD0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
LRRC39Q96DD0 RNU6-281P-201ENST00000384212 103 ntBASIC0.1□□□□□ -2.39
LRRC39Q96DD0 Y_RNA.490-201ENST00000384413 102 ntBASIC0.1□□□□□ -2.39
LRRC39Q96DD0 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
LRRC39Q96DD0 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
LRRC39Q96DD0 RNU6-1304P-201ENST00000411374 106 ntBASIC0.1□□□□□ -2.39
LRRC39Q96DD0 AL590632.1-201ENST00000424289 371 ntBASIC0.1□□□□□ -2.39
LRRC39Q96DD0 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.1□□□□□ -2.39
LRRC39Q96DD0 USMG5P1-201ENST00000425964 177 ntBASIC0.1□□□□□ -2.39
LRRC39Q96DD0 MTCO3P10-201ENST00000455912 772 ntBASIC0.1□□□□□ -2.39
LRRC39Q96DD0 MIR1273G-201ENST00000577677 100 ntBASIC0.1□□□□□ -2.39
LRRC39Q96DD0 AC073648.5-201ENST00000603502 305 ntBASIC0.1□□□□□ -2.39
LRRC39Q96DD0 AC100812.1-201ENST00000607622 580 ntBASIC0.1□□□□□ -2.39
LRRC39Q96DD0 SNORD68-201ENST00000363214 84 ntBASIC0.09□□□□□ -2.4
LRRC39Q96DD0 RNU6-254P-201ENST00000363377 107 ntBASIC0.09□□□□□ -2.4
LRRC39Q96DD0 Y_RNA.168-201ENST00000363740 102 ntBASIC0.09□□□□□ -2.4
LRRC39Q96DD0 RNU4-67P-201ENST00000364569 141 ntBASIC0.09□□□□□ -2.4
LRRC39Q96DD0 MIR516B2-201ENST00000385190 85 ntBASIC0.09□□□□□ -2.4
LRRC39Q96DD0 RNA5SP95-201ENST00000410319 137 ntBASIC0.09□□□□□ -2.4
LRRC39Q96DD0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.09□□□□□ -2.4
LRRC39Q96DD0 AL445567.1-201ENST00000439121 144 ntBASIC0.09□□□□□ -2.4
LRRC39Q96DD0 MTND3P16-201ENST00000452205 344 ntBASIC0.09□□□□□ -2.4
LRRC39Q96DD0 MIR2115-201ENST00000516657 100 ntBASIC0.09□□□□□ -2.4
LRRC39Q96DD0 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.09□□□□□ -2.4
LRRC39Q96DD0 AC023932.2-201ENST00000603176 175 ntBASIC0.09□□□□□ -2.4
LRRC39Q96DD0 AL355073.2-201ENST00000612106 557 ntBASIC0.09□□□□□ -2.4
LRRC39Q96DD0 AC091931.1-201ENST00000623488 728 ntBASIC0.09□□□□□ -2.4
LRRC39Q96DD0 Y_RNA.151-201ENST00000363566 112 ntBASIC0.08□□□□□ -2.4
LRRC39Q96DD0 Y_RNA.296-201ENST00000364930 108 ntBASIC0.08□□□□□ -2.4
LRRC39Q96DD0 SNORA72.3-201ENST00000365074 132 ntBASIC0.08□□□□□ -2.4
LRRC39Q96DD0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
LRRC39Q96DD0 SNORA2B-201ENST00000384583 137 ntBASIC0.08□□□□□ -2.4
LRRC39Q96DD0 AC005534.2-201ENST00000431047 433 ntBASIC0.08□□□□□ -2.4
LRRC39Q96DD0 AC105313.1-201ENST00000509121 353 ntBASIC0.08□□□□□ -2.4
LRRC39Q96DD0 RNA5SP480-201ENST00000516840 109 ntBASIC0.08□□□□□ -2.4
LRRC39Q96DD0 AC087752.4-201ENST00000605911 462 ntBASIC0.08□□□□□ -2.4
LRRC39Q96DD0 AF250324.2-201ENST00000608299 610 ntBASIC0.08□□□□□ -2.4
LRRC39Q96DD0 AC092954.2-201ENST00000609103 430 ntBASIC0.08□□□□□ -2.4
LRRC39Q96DD0 AC091925.1-201ENST00000623204 462 ntBASIC0.08□□□□□ -2.4
LRRC39Q96DD0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.08□□□□□ -2.4
LRRC39Q96DD0 AC099654.12-201ENST00000639868 649 ntBASIC0.08□□□□□ -2.4
LRRC39Q96DD0 SNORA69-201ENST00000383895 132 ntBASIC0.07□□□□□ -2.4
LRRC39Q96DD0 HMGN2P32-201ENST00000444648 269 ntBASIC0.07□□□□□ -2.4
LRRC39Q96DD0 RN7SKP287-201ENST00000516546 266 ntBASIC0.07□□□□□ -2.4
LRRC39Q96DD0 AC090617.3-201ENST00000573670 475 ntBASIC0.07□□□□□ -2.4
LRRC39Q96DD0 AC005730.3-201ENST00000583067 366 ntBASIC0.07□□□□□ -2.4
LRRC39Q96DD0 AC093424.1-201ENST00000604999 338 ntBASIC0.07□□□□□ -2.4
LRRC39Q96DD0 AC092634.7-201ENST00000621022 103 ntBASIC0.07□□□□□ -2.4
LRRC39Q96DD0 U6.115-201ENST00000636045 103 ntBASIC0.07□□□□□ -2.4
LRRC39Q96DD0 MIR18A-201ENST00000362310 71 ntBASIC0.06□□□□□ -2.4
LRRC39Q96DD0 SNORD114-26-201ENST00000363543 72 ntBASIC0.06□□□□□ -2.4
LRRC39Q96DD0 Y_RNA.231-201ENST00000364358 102 ntBASIC0.06□□□□□ -2.4
LRRC39Q96DD0 RNU6-522P-201ENST00000364497 107 ntBASIC0.06□□□□□ -2.4
LRRC39Q96DD0 Y_RNA.376-201ENST00000365638 108 ntBASIC0.06□□□□□ -2.4
LRRC39Q96DD0 ELOCP24-201ENST00000456370 334 ntBASIC0.06□□□□□ -2.4
LRRC39Q96DD0 U8.19-201ENST00000459095 133 ntBASIC0.06□□□□□ -2.4
LRRC39Q96DD0 U8.22-201ENST00000459141 133 ntBASIC0.06□□□□□ -2.4
LRRC39Q96DD0 AC116353.2-201ENST00000505332 712 ntBASIC0.06□□□□□ -2.4
LRRC39Q96DD0 RNU6-863P-201ENST00000515989 104 ntBASIC0.06□□□□□ -2.4
LRRC39Q96DD0 Y_RNA.670-201ENST00000516255 105 ntBASIC0.06□□□□□ -2.4
LRRC39Q96DD0 SNORA18.7-201ENST00000516910 131 ntBASIC0.06□□□□□ -2.4
LRRC39Q96DD0 AL162730.1-201ENST00000605734 292 ntBASIC0.06□□□□□ -2.4
LRRC39Q96DD0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.06□□□□□ -2.4
LRRC39Q96DD0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.05□□□□□ -2.4
LRRC39Q96DD0 MIR330-201ENST00000362196 94 ntBASIC0.05□□□□□ -2.4
LRRC39Q96DD0 RNU6-222P-201ENST00000362438 107 ntBASIC0.05□□□□□ -2.4
LRRC39Q96DD0 SNORD44.1-201ENST00000363202 61 ntBASIC0.05□□□□□ -2.4
LRRC39Q96DD0 RNU6-596P-201ENST00000365395 98 ntBASIC0.05□□□□□ -2.4
LRRC39Q96DD0 Y_RNA.476-201ENST00000384347 108 ntBASIC0.05□□□□□ -2.4
LRRC39Q96DD0 RNU6-95P-201ENST00000384697 107 ntBASIC0.05□□□□□ -2.4
LRRC39Q96DD0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.05□□□□□ -2.4
LRRC39Q96DD0 UQCRBP2-201ENST00000447827 297 ntBASIC0.05□□□□□ -2.4
LRRC39Q96DD0 SNRPGP12-201ENST00000449481 213 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms