Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 Y_RNA.661-201ENST00000516003 99 ntBASIC1.14□□□□□ -2.23
TMX2-CTNND1H3BSU7 SNORA31.10-201ENST00000516482 106 ntBASIC1.14□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNU6-911P-201ENST00000516523 104 ntBASIC1.14□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.14□□□□□ -2.23
TMX2-CTNND1H3BSU7 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.14□□□□□ -2.23
TMX2-CTNND1H3BSU7 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.14□□□□□ -2.23
TMX2-CTNND1H3BSU7 uc_338.22-201ENST00000622722 187 ntBASIC1.14□□□□□ -2.23
TMX2-CTNND1H3BSU7 U6.115-201ENST00000636045 103 ntBASIC1.14□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 MIR302D-201ENST00000362275 68 ntBASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 Y_RNA.80-201ENST00000362996 102 ntBASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 Y_RNA.112-201ENST00000363250 102 ntBASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 Y_RNA.146-201ENST00000363549 102 ntBASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 Y_RNA.197-201ENST00000364004 102 ntBASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNU1-93P-201ENST00000364704 169 ntBASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNU5E-4P-201ENST00000364931 120 ntBASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 Y_RNA.485-201ENST00000384395 102 ntBASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 MIR520A-201ENST00000384862 85 ntBASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 MT-TD-201ENST00000387419 68 ntBASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNA5SP109-201ENST00000391010 116 ntBASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 Y_RNA.604-201ENST00000410574 102 ntBASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC099799.1-201ENST00000439809 192 ntBASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC073910.1-201ENST00000445047 438 ntBASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC074290.1-201ENST00000448883 135 ntBASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 Y_RNA.639-201ENST00000458981 102 ntBASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNA5SP57-201ENST00000459463 123 ntBASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC005908.1-201ENST00000468701 347 ntBASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC099513.1-201ENST00000490423 301 ntBASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC010598.1-201ENST00000510378 103 ntBASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNU7-4P-201ENST00000516961 62 ntBASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNU2-12P-201ENST00000517216 168 ntBASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 AL390123.1-201ENST00000603216 237 ntBASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 AL080274.1-201ENST00000605565 220 ntBASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 U2.1-201ENST00000618978 145 ntBASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
TMX2-CTNND1H3BSU7 Y_RNA.31-201ENST00000362574 102 ntBASIC1.12□□□□□ -2.23
TMX2-CTNND1H3BSU7 Y_RNA.101-201ENST00000363154 102 ntBASIC1.12□□□□□ -2.23
TMX2-CTNND1H3BSU7 Y_RNA.314-201ENST00000365114 102 ntBASIC1.12□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNU6-117P-201ENST00000365415 107 ntBASIC1.12□□□□□ -2.23
TMX2-CTNND1H3BSU7 Y_RNA.498-201ENST00000384460 102 ntBASIC1.12□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNU6-360P-201ENST00000390944 104 ntBASIC1.12□□□□□ -2.23
TMX2-CTNND1H3BSU7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.12□□□□□ -2.23
TMX2-CTNND1H3BSU7 EBAG9P1-201ENST00000418955 543 ntBASIC1.12□□□□□ -2.23
TMX2-CTNND1H3BSU7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.12□□□□□ -2.23
TMX2-CTNND1H3BSU7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.12□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNU6-625P-201ENST00000459412 107 ntBASIC1.12□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNU6-408P-201ENST00000515910 100 ntBASIC1.12□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNU6-1146P-201ENST00000516282 102 ntBASIC1.12□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC024995.1-201ENST00000523014 93 ntBASIC1.12□□□□□ -2.23
TMX2-CTNND1H3BSU7 MIR5188-201ENST00000583467 113 ntBASIC1.12□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC022432.1-201ENST00000595739 310 ntBASIC1.12□□□□□ -2.23
TMX2-CTNND1H3BSU7 RMST_2.1-201ENST00000617263 136 ntBASIC1.12□□□□□ -2.23
TMX2-CTNND1H3BSU7 U6.92-201ENST00000636464 89 ntBASIC1.12□□□□□ -2.23
TMX2-CTNND1H3BSU7 MIR3674-201ENST00000636576 68 ntBASIC1.12□□□□□ -2.23
TMX2-CTNND1H3BSU7 MIR424-201ENST00000362227 98 ntBASIC1.11□□□□□ -2.23
TMX2-CTNND1H3BSU7 MIR96-201ENST00000362288 78 ntBASIC1.11□□□□□ -2.23
TMX2-CTNND1H3BSU7 SNORA27.1-201ENST00000362604 124 ntBASIC1.11□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNU1-115P-201ENST00000365329 160 ntBASIC1.11□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNU6-1080P-201ENST00000383982 107 ntBASIC1.11□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNU6-474P-201ENST00000384243 107 ntBASIC1.11□□□□□ -2.23
TMX2-CTNND1H3BSU7 Y_RNA.466-201ENST00000384294 113 ntBASIC1.11□□□□□ -2.23
TMX2-CTNND1H3BSU7 MRPL35P1-201ENST00000404272 572 ntBASIC1.11□□□□□ -2.23
TMX2-CTNND1H3BSU7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.11□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC236972.2-201ENST00000434979 310 ntBASIC1.11□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC093852.1-201ENST00000503587 266 ntBASIC1.11□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.11□□□□□ -2.23
TMX2-CTNND1H3BSU7 RN7SKP179-201ENST00000516126 217 ntBASIC1.11□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNU7-99P-201ENST00000516271 62 ntBASIC1.11□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNU6-107P-201ENST00000516643 102 ntBASIC1.11□□□□□ -2.23
TMX2-CTNND1H3BSU7 SNORD116.3-201ENST00000517176 78 ntBASIC1.11□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC144568.1-201ENST00000520139 137 ntBASIC1.11□□□□□ -2.23
TMX2-CTNND1H3BSU7 VN1R91P-201ENST00000594377 169 ntBASIC1.11□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC092447.9-201ENST00000603395 144 ntBASIC1.11□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC133104.2-201ENST00000615272 193 ntBASIC1.11□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC011476.5-201ENST00000615594 130 ntBASIC1.11□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC240442.1-201ENST00000616055 283 ntBASIC1.11□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC006435.5-201ENST00000624486 112 ntBASIC1.11□□□□□ -2.23
TMX2-CTNND1H3BSU7 AL008636.1-201ENST00000625038 1018 ntBASIC1.11□□□□□ -2.23
TMX2-CTNND1H3BSU7 Y_RNA.27-201ENST00000362540 103 ntBASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 Y_RNA.61-201ENST00000362835 102 ntBASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 Y_RNA.124-201ENST00000363339 93 ntBASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 SNORD115-30-201ENST00000364117 82 ntBASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNU6-926P-201ENST00000384075 107 ntBASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 MIR515-2-201ENST00000384883 83 ntBASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 MIR515-1-201ENST00000384884 83 ntBASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 MIR618-201ENST00000385287 98 ntBASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 PMCHL1-202ENST00000423102 261 ntBASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 MRPS10P1-201ENST00000448483 130 ntBASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC010655.3-201ENST00000478818 450 ntBASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNU6-976P-201ENST00000516086 111 ntBASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC023157.2-201ENST00000540596 141 ntBASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 MIR4659A-201ENST00000580269 81 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 194.5 ms