Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.98□□□□□ -1.61
CCDC61Q9Y6R9 AC103810.7-201ENST00000607821 91 ntBASIC4.98□□□□□ -1.61
CCDC61Q9Y6R9 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC61Q9Y6R9 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC61Q9Y6R9 AP003122.5-201ENST00000527668 3766 ntBASIC4.98□□□□□ -1.61
CCDC61Q9Y6R9 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC61Q9Y6R9 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC61Q9Y6R9 RNU6-1313P-201ENST00000362622 102 ntBASIC4.97□□□□□ -1.61
CCDC61Q9Y6R9 RNA5SP167-201ENST00000365461 116 ntBASIC4.97□□□□□ -1.61
CCDC61Q9Y6R9 AC125388.1-201ENST00000459631 156 ntBASIC4.97□□□□□ -1.61
CCDC61Q9Y6R9 TRBV12-2-201ENST00000489763 344 ntBASIC4.97□□□□□ -1.61
CCDC61Q9Y6R9 AC002984.1-201ENST00000591692 448 ntBASIC4.97□□□□□ -1.61
CCDC61Q9Y6R9 MIR6079-201ENST00000635807 62 ntBASIC4.97□□□□□ -1.61
CCDC61Q9Y6R9 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.97□□□□□ -1.61
CCDC61Q9Y6R9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CCDC61Q9Y6R9 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC61Q9Y6R9 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CCDC61Q9Y6R9 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.96□□□□□ -1.62
CCDC61Q9Y6R9 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC61Q9Y6R9 AL049873.1-201ENST00000480540 376 ntBASIC4.96□□□□□ -1.62
CCDC61Q9Y6R9 AC093729.1-201ENST00000513074 128 ntBASIC4.96□□□□□ -1.62
CCDC61Q9Y6R9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC61Q9Y6R9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC61Q9Y6R9 AC005000.2-201ENST00000605468 310 ntBASIC4.96□□□□□ -1.62
CCDC61Q9Y6R9 U2.20-201ENST00000613956 192 ntBASIC4.96□□□□□ -1.62
CCDC61Q9Y6R9 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC61Q9Y6R9 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC61Q9Y6R9 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CCDC61Q9Y6R9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC61Q9Y6R9 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC61Q9Y6R9 RNU6-1084P-201ENST00000362498 107 ntBASIC4.95□□□□□ -1.62
CCDC61Q9Y6R9 RNU6-1274P-201ENST00000384557 107 ntBASIC4.95□□□□□ -1.62
CCDC61Q9Y6R9 MIR513A2-201ENST00000385249 127 ntBASIC4.95□□□□□ -1.62
CCDC61Q9Y6R9 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC61Q9Y6R9 AC107083.1-201ENST00000439643 279 ntBASIC4.95□□□□□ -1.62
CCDC61Q9Y6R9 AC115115.1-201ENST00000449927 248 ntBASIC4.95□□□□□ -1.62
CCDC61Q9Y6R9 U3.44-201ENST00000458938 192 ntBASIC4.95□□□□□ -1.62
CCDC61Q9Y6R9 RPL30P14-201ENST00000482744 348 ntBASIC4.95□□□□□ -1.62
CCDC61Q9Y6R9 RNU2-27P-201ENST00000516185 142 ntBASIC4.95□□□□□ -1.62
CCDC61Q9Y6R9 MIR8058-201ENST00000615737 89 ntBASIC4.95□□□□□ -1.62
CCDC61Q9Y6R9 AC021613.1-201ENST00000623880 111 ntBASIC4.95□□□□□ -1.62
CCDC61Q9Y6R9 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC61Q9Y6R9 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CCDC61Q9Y6R9 LINC02471-203ENST00000641941 4752 ntBASIC4.95□□□□□ -1.62
CCDC61Q9Y6R9 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC61Q9Y6R9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
CCDC61Q9Y6R9 RNU4-35P-201ENST00000362588 141 ntBASIC4.94□□□□□ -1.62
CCDC61Q9Y6R9 RNU6-524P-201ENST00000384270 107 ntBASIC4.94□□□□□ -1.62
CCDC61Q9Y6R9 SNORD17-201ENST00000390930 237 ntBASIC4.94□□□□□ -1.62
CCDC61Q9Y6R9 Z92545.1-201ENST00000411782 234 ntBASIC4.94□□□□□ -1.62
CCDC61Q9Y6R9 AL049830.1-201ENST00000468034 425 ntBASIC4.94□□□□□ -1.62
CCDC61Q9Y6R9 AC025518.1-201ENST00000479856 347 ntBASIC4.94□□□□□ -1.62
CCDC61Q9Y6R9 AC108729.3-201ENST00000513484 108 ntBASIC4.94□□□□□ -1.62
CCDC61Q9Y6R9 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.94□□□□□ -1.62
CCDC61Q9Y6R9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC61Q9Y6R9 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC61Q9Y6R9 SNORD115-37-201ENST00000363768 82 ntBASIC4.93□□□□□ -1.62
CCDC61Q9Y6R9 snoU2-30.1-201ENST00000365012 70 ntBASIC4.93□□□□□ -1.62
CCDC61Q9Y6R9 RNA5SP239-201ENST00000410218 129 ntBASIC4.93□□□□□ -1.62
CCDC61Q9Y6R9 Z98742.2-201ENST00000431564 187 ntBASIC4.93□□□□□ -1.62
CCDC61Q9Y6R9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC61Q9Y6R9 RNU7-113P-201ENST00000459273 62 ntBASIC4.93□□□□□ -1.62
CCDC61Q9Y6R9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC61Q9Y6R9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC61Q9Y6R9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC61Q9Y6R9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CCDC61Q9Y6R9 AC103810.1-201ENST00000579873 453 ntBASIC4.93□□□□□ -1.62
CCDC61Q9Y6R9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC61Q9Y6R9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CCDC61Q9Y6R9 MIR376B-201ENST00000614515 100 ntBASIC4.93□□□□□ -1.62
CCDC61Q9Y6R9 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC61Q9Y6R9 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
CCDC61Q9Y6R9 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC61Q9Y6R9 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC61Q9Y6R9 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC61Q9Y6R9 SNORA31-201ENST00000362607 130 ntBASIC4.92□□□□□ -1.62
CCDC61Q9Y6R9 RNU6-315P-201ENST00000362666 107 ntBASIC4.92□□□□□ -1.62
CCDC61Q9Y6R9 AL133412.1-201ENST00000380194 2992 ntBASIC4.92□□□□□ -1.62
CCDC61Q9Y6R9 RNU6-198P-201ENST00000384258 104 ntBASIC4.92□□□□□ -1.62
CCDC61Q9Y6R9 MIR519C-201ENST00000385053 87 ntBASIC4.92□□□□□ -1.62
CCDC61Q9Y6R9 RNA5SP306-201ENST00000411087 107 ntBASIC4.92□□□□□ -1.62
CCDC61Q9Y6R9 SNRPGP14-201ENST00000435400 219 ntBASIC4.92□□□□□ -1.62
CCDC61Q9Y6R9 HMGN2P18-201ENST00000450680 270 ntBASIC4.92□□□□□ -1.62
CCDC61Q9Y6R9 AP000873.1-201ENST00000463987 400 ntBASIC4.92□□□□□ -1.62
CCDC61Q9Y6R9 AC004223.1-201ENST00000479840 271 ntBASIC4.92□□□□□ -1.62
CCDC61Q9Y6R9 RNU6-539P-201ENST00000516665 103 ntBASIC4.92□□□□□ -1.62
CCDC61Q9Y6R9 MIR3690-201ENST00000580266 75 ntBASIC4.92□□□□□ -1.62
CCDC61Q9Y6R9 MIR6076-201ENST00000617521 113 ntBASIC4.92□□□□□ -1.62
CCDC61Q9Y6R9 AF117829.1-206ENST00000621883 3802 ntBASIC4.92□□□□□ -1.62
CCDC61Q9Y6R9 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC61Q9Y6R9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC61Q9Y6R9 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC61Q9Y6R9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC61Q9Y6R9 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC61Q9Y6R9 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CCDC61Q9Y6R9 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC61Q9Y6R9 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC61Q9Y6R9 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.91□□□□□ -1.62
CCDC61Q9Y6R9 AC017083.1-201ENST00000428093 483 ntBASIC4.91□□□□□ -1.62
CCDC61Q9Y6R9 AL161932.1-201ENST00000437408 146 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 257.1 ms