Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 Y_RNA.432-201ENST00000384087 111 ntBASIC3.02□□□□□ -1.93
EPHB3P54753 Y_RNA.587-201ENST00000391210 103 ntBASIC3.02□□□□□ -1.93
EPHB3P54753 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.02□□□□□ -1.93
EPHB3P54753 RPS29P12-201ENST00000460178 152 ntBASIC3.02□□□□□ -1.93
EPHB3P54753 AC112771.1-201ENST00000463581 102 ntBASIC3.02□□□□□ -1.93
EPHB3P54753 AC006483.1-201ENST00000487308 313 ntBASIC3.02□□□□□ -1.93
EPHB3P54753 RPL23AP54-201ENST00000495129 419 ntBASIC3.02□□□□□ -1.93
EPHB3P54753 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.02□□□□□ -1.93
EPHB3P54753 RNU6-1098P-201ENST00000516772 96 ntBASIC3.02□□□□□ -1.93
EPHB3P54753 MIR4319-201ENST00000577285 85 ntBASIC3.02□□□□□ -1.93
EPHB3P54753 MIR4672-201ENST00000583126 81 ntBASIC3.02□□□□□ -1.93
EPHB3P54753 AL670379.3-201ENST00000605040 251 ntBASIC3.02□□□□□ -1.93
EPHB3P54753 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
EPHB3P54753 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
EPHB3P54753 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.02□□□□□ -1.93
EPHB3P54753 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
EPHB3P54753 MIR767-201ENST00000390228 109 ntBASIC3.01□□□□□ -1.93
EPHB3P54753 NDUFA5P6-201ENST00000542110 379 ntBASIC3.01□□□□□ -1.93
EPHB3P54753 MIR3162-201ENST00000581818 82 ntBASIC3.01□□□□□ -1.93
EPHB3P54753 AC108081.1-201ENST00000604358 221 ntBASIC3.01□□□□□ -1.93
EPHB3P54753 uc_338.14-201ENST00000613162 166 ntBASIC3.01□□□□□ -1.93
EPHB3P54753 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.01□□□□□ -1.93
EPHB3P54753 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
EPHB3P54753 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
EPHB3P54753 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
EPHB3P54753 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
EPHB3P54753 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
EPHB3P54753 AC138915.1-201ENST00000565427 1685 ntBASIC3.01□□□□□ -1.93
EPHB3P54753 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3□□□□□ -1.93
EPHB3P54753 Y_RNA.114-201ENST00000363265 113 ntBASIC3□□□□□ -1.93
EPHB3P54753 RNA5SP354-201ENST00000391247 136 ntBASIC3□□□□□ -1.93
EPHB3P54753 MIR300-201ENST00000401138 83 ntBASIC3□□□□□ -1.93
EPHB3P54753 MIR1283-1-201ENST00000408494 87 ntBASIC3□□□□□ -1.93
EPHB3P54753 RNA5SP89-201ENST00000410300 108 ntBASIC3□□□□□ -1.93
EPHB3P54753 RPL39P40-201ENST00000445481 146 ntBASIC3□□□□□ -1.93
EPHB3P54753 AC010598.1-201ENST00000510378 103 ntBASIC3□□□□□ -1.93
EPHB3P54753 AC131055.1-201ENST00000584626 316 ntBASIC3□□□□□ -1.93
EPHB3P54753 RPL30P11-203ENST00000598995 310 ntBASIC3□□□□□ -1.93
EPHB3P54753 AC097639.2-201ENST00000603159 172 ntBASIC3□□□□□ -1.93
EPHB3P54753 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
EPHB3P54753 MAPK10-266ENST00000641066 6555 ntBASIC2.99□□□□□ -1.93
EPHB3P54753 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.99□□□□□ -1.93
EPHB3P54753 RNU4-41P-201ENST00000364426 143 ntBASIC2.99□□□□□ -1.93
EPHB3P54753 SNORA46-201ENST00000384762 135 ntBASIC2.99□□□□□ -1.93
EPHB3P54753 Y_RNA.630-201ENST00000411370 108 ntBASIC2.99□□□□□ -1.93
EPHB3P54753 AC063976.3-201ENST00000426849 329 ntBASIC2.99□□□□□ -1.93
EPHB3P54753 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.99□□□□□ -1.93
EPHB3P54753 SNORD65B-201ENST00000459126 73 ntBASIC2.99□□□□□ -1.93
EPHB3P54753 RNU7-57P-201ENST00000459540 60 ntBASIC2.99□□□□□ -1.93
EPHB3P54753 RNU6-221P-201ENST00000459541 99 ntBASIC2.99□□□□□ -1.93
EPHB3P54753 AC090515.1-201ENST00000465295 476 ntBASIC2.99□□□□□ -1.93
EPHB3P54753 RNU6-168P-201ENST00000516189 101 ntBASIC2.99□□□□□ -1.93
EPHB3P54753 RNA5SP153-201ENST00000516498 76 ntBASIC2.99□□□□□ -1.93
EPHB3P54753 RNU5F-4P-201ENST00000516581 114 ntBASIC2.99□□□□□ -1.93
EPHB3P54753 AC068657.1-201ENST00000520807 306 ntBASIC2.99□□□□□ -1.93
EPHB3P54753 AC133485.4-201ENST00000561835 220 ntBASIC2.99□□□□□ -1.93
EPHB3P54753 AC138907.4-201ENST00000570107 226 ntBASIC2.99□□□□□ -1.93
EPHB3P54753 AC002064.3-201ENST00000623448 346 ntBASIC2.99□□□□□ -1.93
EPHB3P54753 snoZ196.1-201ENST00000625269 89 ntBASIC2.99□□□□□ -1.93
EPHB3P54753 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
EPHB3P54753 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.98□□□□□ -1.93
EPHB3P54753 AL356292.1-201ENST00000283110 373 ntBASIC2.98□□□□□ -1.93
EPHB3P54753 AC062016.1-201ENST00000355719 319 ntBASIC2.98□□□□□ -1.93
EPHB3P54753 SNORD58C-201ENST00000365223 64 ntBASIC2.98□□□□□ -1.93
EPHB3P54753 RNU6-136P-201ENST00000384663 107 ntBASIC2.98□□□□□ -1.93
EPHB3P54753 MIR29B2-201ENST00000385055 81 ntBASIC2.98□□□□□ -1.93
EPHB3P54753 AL603914.1-201ENST00000401964 204 ntBASIC2.98□□□□□ -1.93
EPHB3P54753 Y_RNA.617-201ENST00000410920 90 ntBASIC2.98□□□□□ -1.93
EPHB3P54753 MLLT10P1-201ENST00000418346 262 ntBASIC2.98□□□□□ -1.93
EPHB3P54753 AC009414.1-201ENST00000427200 443 ntBASIC2.98□□□□□ -1.93
EPHB3P54753 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.98□□□□□ -1.93
EPHB3P54753 UQCRHP3-201ENST00000451503 251 ntBASIC2.98□□□□□ -1.93
EPHB3P54753 AC010531.2-201ENST00000465012 153 ntBASIC2.98□□□□□ -1.93
EPHB3P54753 RPL36AP48-201ENST00000485521 314 ntBASIC2.98□□□□□ -1.93
EPHB3P54753 RNU6-1299P-201ENST00000516316 100 ntBASIC2.98□□□□□ -1.93
EPHB3P54753 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.98□□□□□ -1.93
EPHB3P54753 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.98□□□□□ -1.93
EPHB3P54753 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
EPHB3P54753 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
EPHB3P54753 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
EPHB3P54753 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
EPHB3P54753 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
EPHB3P54753 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
EPHB3P54753 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
EPHB3P54753 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.97□□□□□ -1.93
EPHB3P54753 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.97□□□□□ -1.93
EPHB3P54753 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
EPHB3P54753 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
EPHB3P54753 RNU6-1080P-201ENST00000383982 107 ntBASIC2.97□□□□□ -1.93
EPHB3P54753 SNORD116-21-201ENST00000384507 92 ntBASIC2.97□□□□□ -1.93
EPHB3P54753 AL031121.1-201ENST00000406553 254 ntBASIC2.97□□□□□ -1.93
EPHB3P54753 Z82209.1-201ENST00000422141 2135 ntBASIC2.97□□□□□ -1.93
EPHB3P54753 EIF4EP4-201ENST00000424916 578 ntBASIC2.97□□□□□ -1.93
EPHB3P54753 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.97□□□□□ -1.93
EPHB3P54753 Y_RNA.651-201ENST00000459380 103 ntBASIC2.97□□□□□ -1.93
EPHB3P54753 RNA5SP20-201ENST00000515976 84 ntBASIC2.97□□□□□ -1.93
EPHB3P54753 RNU2-60P-201ENST00000517290 128 ntBASIC2.97□□□□□ -1.93
EPHB3P54753 AC091178.2-201ENST00000584401 117 ntBASIC2.97□□□□□ -1.93
EPHB3P54753 MIR4506-201ENST00000584693 77 ntBASIC2.97□□□□□ -1.93
EPHB3P54753 AC008739.2-201ENST00000597006 317 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms