Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 SNORD41-201ENST00000386967 70 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 RNA5SP496-201ENST00000391240 109 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 AL590002.1-201ENST00000406554 418 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 MIR1253-201ENST00000408273 105 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 RNA5SP95-201ENST00000410319 137 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 AC004866.1-201ENST00000411748 78 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 AL355994.1-201ENST00000424379 260 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 MTND1P14-201ENST00000427400 950 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-0.05□□□□□ -2.42
TTC28Q96AY4 AC008628.2-201ENST00000502605 298 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 AC108019.1-201ENST00000512540 175 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 MIR5697-201ENST00000578045 78 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 BCRP9-201ENST00000605312 388 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.05□□□□□ -2.42
TTC28Q96AY4 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
TTC28Q96AY4 U8.7-201ENST00000364940 136 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 RNU6V-201ENST00000384105 107 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 SNORD116-12-201ENST00000384468 92 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 MIR196A1-201ENST00000388006 70 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 RNU6-284P-201ENST00000411105 106 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.06□□□□□ -2.42
TTC28Q96AY4 TIMM9P3-201ENST00000428659 274 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.06□□□□□ -2.42
TTC28Q96AY4 RNU7-94P-201ENST00000459576 63 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 AC016632.1-201ENST00000503994 196 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.06□□□□□ -2.42
TTC28Q96AY4 RPL23AP91-201ENST00000569211 455 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 NAMPTP3-201ENST00000569273 224 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 SNORA25.18-201ENST00000607153 114 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.06□□□□□ -2.42
TTC28Q96AY4 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 SNORD114-25-201ENST00000363742 72 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 MIR760-201ENST00000390220 80 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 SNORD111-201ENST00000408139 94 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.06□□□□□ -2.42
TTC28Q96AY4 AL133396.1-201ENST00000432048 687 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 AC093019.1-201ENST00000443135 252 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 PCNPP5-201ENST00000452246 481 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 AC010376.1-201ENST00000522101 334 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 AC023442.1-201ENST00000531247 422 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 AC013828.2-201ENST00000532487 235 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
TTC28Q96AY4 MTND1P15-201ENST00000579262 949 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 MIR4431-201ENST00000579990 94 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 AL136317.1-201ENST00000612653 226 ntBASIC-0.06□□□□□ -2.42
TTC28Q96AY4 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 SNORA42.1-201ENST00000363515 137 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 Y_RNA.192-201ENST00000363977 102 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 MIR573-201ENST00000384964 99 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 MIR1284-201ENST00000408337 120 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 MTND3P17-201ENST00000416968 344 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 AL117339.3-201ENST00000418733 162 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 MTCYBP10-201ENST00000424905 650 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.07□□□□□ -2.42
TTC28Q96AY4 AC005002.2-201ENST00000438228 269 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 RNU6-274P-201ENST00000459566 107 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 OR9P1P-201ENST00000496431 281 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 SNORA70.12-201ENST00000516084 153 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.07□□□□□ -2.42
TTC28Q96AY4 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.07□□□□□ -2.42
TTC28Q96AY4 AC027419.1-201ENST00000522976 328 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 AC011195.1-201ENST00000578177 177 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 snoZ196.1-201ENST00000625269 89 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 MIRLET7C-201ENST00000362160 84 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 SNORA1.1-201ENST00000364671 133 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 MIR891A-201ENST00000401237 79 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 MIR1827-201ENST00000408549 66 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 RNU6-387P-201ENST00000411331 105 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 AC106883.1-201ENST00000418805 562 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 AC090960.1-201ENST00000421072 306 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 SNRPGP7-201ENST00000469016 106 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 MTND4LP25-201ENST00000570218 163 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.07□□□□□ -2.42
TTC28Q96AY4 AC099786.3-201ENST00000565735 1410 ntBASIC-0.07□□□□□ -2.42
TTC28Q96AY4 MTND4P4-201ENST00000439033 1366 ntBASIC-0.08□□□□□ -2.42
TTC28Q96AY4 RNU6-440P-201ENST00000390882 105 ntBASIC-0.08□□□□□ -2.42
TTC28Q96AY4 MIR8485-201ENST00000401372 91 ntBASIC-0.08□□□□□ -2.42
TTC28Q96AY4 NFU1P2-201ENST00000448700 469 ntBASIC-0.08□□□□□ -2.42
TTC28Q96AY4 AC117522.1-201ENST00000509821 380 ntBASIC-0.08□□□□□ -2.42
TTC28Q96AY4 SNORA25.12-201ENST00000516202 82 ntBASIC-0.08□□□□□ -2.42
TTC28Q96AY4 SNORD111.1-201ENST00000516421 86 ntBASIC-0.08□□□□□ -2.42
TTC28Q96AY4 AC022784.5-201ENST00000522241 437 ntBASIC-0.08□□□□□ -2.42
TTC28Q96AY4 AC123904.2-201ENST00000548059 300 ntBASIC-0.08□□□□□ -2.42
TTC28Q96AY4 AK6P2-201ENST00000549020 471 ntBASIC-0.08□□□□□ -2.42
TTC28Q96AY4 AP001836.1-201ENST00000604675 523 ntBASIC-0.08□□□□□ -2.42
TTC28Q96AY4 RNU6-94P-201ENST00000607728 107 ntBASIC-0.08□□□□□ -2.42
TTC28Q96AY4 uc_338.11-201ENST00000619132 160 ntBASIC-0.08□□□□□ -2.42
TTC28Q96AY4 RNU6-975P-201ENST00000384296 105 ntBASIC-0.08□□□□□ -2.42
TTC28Q96AY4 RNU6-769P-201ENST00000384407 104 ntBASIC-0.08□□□□□ -2.42
TTC28Q96AY4 SNORA2B-201ENST00000384583 137 ntBASIC-0.08□□□□□ -2.42
TTC28Q96AY4 MIR487A-201ENST00000385009 80 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 242 ms