Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 RNU4-13P-201ENST00000364019 141 ntBASIC3.04□□□□□ -1.92
CTSKP43235 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CTSKP43235 FO393413.1-201ENST00000402892 195 ntBASIC3.04□□□□□ -1.92
CTSKP43235 SNORA79-201ENST00000408376 140 ntBASIC3.04□□□□□ -1.92
CTSKP43235 RNU2-32P-201ENST00000411193 191 ntBASIC3.04□□□□□ -1.92
CTSKP43235 EEF1A1P41-201ENST00000414667 207 ntBASIC3.04□□□□□ -1.92
CTSKP43235 AL139132.1-201ENST00000431587 344 ntBASIC3.04□□□□□ -1.92
CTSKP43235 AC244505.4-201ENST00000434905 287 ntBASIC3.04□□□□□ -1.92
CTSKP43235 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.04□□□□□ -1.92
CTSKP43235 AL161788.1-201ENST00000441805 169 ntBASIC3.04□□□□□ -1.92
CTSKP43235 SSXP5-201ENST00000443473 287 ntBASIC3.04□□□□□ -1.92
CTSKP43235 RPS27P1-201ENST00000450552 247 ntBASIC3.04□□□□□ -1.92
CTSKP43235 HMGN2P18-201ENST00000450680 270 ntBASIC3.04□□□□□ -1.92
CTSKP43235 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.04□□□□□ -1.92
CTSKP43235 RN7SL75P-201ENST00000461926 281 ntBASIC3.04□□□□□ -1.92
CTSKP43235 RNU6-965P-201ENST00000516721 96 ntBASIC3.04□□□□□ -1.92
CTSKP43235 MIR1248-201ENST00000629190 106 ntBASIC3.04□□□□□ -1.92
CTSKP43235 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CTSKP43235 AC093831.2-201ENST00000624393 3427 ntBASIC3.04□□□□□ -1.92
CTSKP43235 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
CTSKP43235 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CTSKP43235 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CTSKP43235 MIR22-201ENST00000362190 85 ntBASIC3.03□□□□□ -1.92
CTSKP43235 MIR181A2-201ENST00000384863 110 ntBASIC3.03□□□□□ -1.92
CTSKP43235 MIR95-201ENST00000385072 81 ntBASIC3.03□□□□□ -1.92
CTSKP43235 RN7SKP101-201ENST00000411376 320 ntBASIC3.03□□□□□ -1.92
CTSKP43235 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.03□□□□□ -1.92
CTSKP43235 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.03□□□□□ -1.92
CTSKP43235 RPL23AP58-201ENST00000440453 469 ntBASIC3.03□□□□□ -1.92
CTSKP43235 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.03□□□□□ -1.92
CTSKP43235 AL357134.1-201ENST00000445848 426 ntBASIC3.03□□□□□ -1.92
CTSKP43235 RPS27P22-201ENST00000478056 241 ntBASIC3.03□□□□□ -1.92
CTSKP43235 RNA5SP272-201ENST00000516095 111 ntBASIC3.03□□□□□ -1.92
CTSKP43235 AC100821.1-201ENST00000523153 2479 ntBASIC3.03□□□□□ -1.92
CTSKP43235 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CTSKP43235 RNU6-117P-201ENST00000365415 107 ntBASIC3.02□□□□□ -1.93
CTSKP43235 MIR539-201ENST00000365690 78 ntBASIC3.02□□□□□ -1.93
CTSKP43235 Y_RNA.521-201ENST00000384560 114 ntBASIC3.02□□□□□ -1.93
CTSKP43235 SNORD67-201ENST00000390833 111 ntBASIC3.02□□□□□ -1.93
CTSKP43235 AC022018.1-201ENST00000430685 241 ntBASIC3.02□□□□□ -1.93
CTSKP43235 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.02□□□□□ -1.93
CTSKP43235 RPS29P12-201ENST00000460178 152 ntBASIC3.02□□□□□ -1.93
CTSKP43235 AC090515.1-201ENST00000465295 476 ntBASIC3.02□□□□□ -1.93
CTSKP43235 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.02□□□□□ -1.93
CTSKP43235 AC091826.1-201ENST00000514065 313 ntBASIC3.02□□□□□ -1.93
CTSKP43235 RNA5SP356-201ENST00000515972 94 ntBASIC3.02□□□□□ -1.93
CTSKP43235 RNU6-561P-201ENST00000516222 102 ntBASIC3.02□□□□□ -1.93
CTSKP43235 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.02□□□□□ -1.93
CTSKP43235 AC090115.4-201ENST00000609970 188 ntBASIC3.02□□□□□ -1.93
CTSKP43235 AC012640.5-201ENST00000623897 319 ntBASIC3.02□□□□□ -1.93
CTSKP43235 MIR6844-201ENST00000637122 62 ntBASIC3.02□□□□□ -1.93
CTSKP43235 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CTSKP43235 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CTSKP43235 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CTSKP43235 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CTSKP43235 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.02□□□□□ -1.93
CTSKP43235 RNU4-41P-201ENST00000364426 143 ntBASIC3.01□□□□□ -1.93
CTSKP43235 DYNLT3P1-201ENST00000378574 347 ntBASIC3.01□□□□□ -1.93
CTSKP43235 Y_RNA.393-201ENST00000383936 102 ntBASIC3.01□□□□□ -1.93
CTSKP43235 SNORA72-201ENST00000384339 132 ntBASIC3.01□□□□□ -1.93
CTSKP43235 MIR1278-201ENST00000408753 81 ntBASIC3.01□□□□□ -1.93
CTSKP43235 AC016909.1-201ENST00000415916 166 ntBASIC3.01□□□□□ -1.93
CTSKP43235 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CTSKP43235 MTND4LP9-201ENST00000427694 174 ntBASIC3.01□□□□□ -1.93
CTSKP43235 UQCRHP3-201ENST00000451503 251 ntBASIC3.01□□□□□ -1.93
CTSKP43235 SNORA4.4-201ENST00000515921 135 ntBASIC3.01□□□□□ -1.93
CTSKP43235 RNU6-63P-201ENST00000516690 95 ntBASIC3.01□□□□□ -1.93
CTSKP43235 SNORA48.11-201ENST00000517015 89 ntBASIC3.01□□□□□ -1.93
CTSKP43235 GTF3AP2-201ENST00000557014 266 ntBASIC3.01□□□□□ -1.93
CTSKP43235 AC015720.1-201ENST00000565251 277 ntBASIC3.01□□□□□ -1.93
CTSKP43235 MIR4506-201ENST00000584693 77 ntBASIC3.01□□□□□ -1.93
CTSKP43235 AL356280.1-201ENST00000603614 379 ntBASIC3.01□□□□□ -1.93
CTSKP43235 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.01□□□□□ -1.93
CTSKP43235 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.01□□□□□ -1.93
CTSKP43235 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3□□□□□ -1.93
CTSKP43235 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CTSKP43235 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3□□□□□ -1.93
CTSKP43235 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
CTSKP43235 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
CTSKP43235 RNU6-1290P-201ENST00000362957 109 ntBASIC3□□□□□ -1.93
CTSKP43235 SNORA22C-201ENST00000384614 134 ntBASIC3□□□□□ -1.93
CTSKP43235 SNORA46-201ENST00000384762 135 ntBASIC3□□□□□ -1.93
CTSKP43235 RNA5SP511-201ENST00000410487 115 ntBASIC3□□□□□ -1.93
CTSKP43235 RNU2-63P-201ENST00000410792 194 ntBASIC3□□□□□ -1.93
CTSKP43235 RNU2-55P-201ENST00000411146 174 ntBASIC3□□□□□ -1.93
CTSKP43235 AL135938.1-201ENST00000443141 297 ntBASIC3□□□□□ -1.93
CTSKP43235 AC023141.11-201ENST00000508864 202 ntBASIC3□□□□□ -1.93
CTSKP43235 MIR3162-201ENST00000581818 82 ntBASIC3□□□□□ -1.93
CTSKP43235 ELOCP29-201ENST00000588193 334 ntBASIC3□□□□□ -1.93
CTSKP43235 AL365222.1-201ENST00000614661 98 ntBASIC3□□□□□ -1.93
CTSKP43235 TUG1_4.1-201ENST00000619464 181 ntBASIC3□□□□□ -1.93
CTSKP43235 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3□□□□□ -1.93
CTSKP43235 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3□□□□□ -1.93
CTSKP43235 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
CTSKP43235 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CTSKP43235 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CTSKP43235 SNORD45.3-201ENST00000363836 72 ntBASIC2.99□□□□□ -1.93
CTSKP43235 Y_RNA.420-201ENST00000384043 110 ntBASIC2.99□□□□□ -1.93
CTSKP43235 AC123900.1-201ENST00000420390 96 ntBASIC2.99□□□□□ -1.93
CTSKP43235 MTCO1P44-201ENST00000441935 243 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 333.8 ms