Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.15□□□□□ -2.23
CDC42EP4Q9H3Q1 MTND3P10-201ENST00000450967 341 ntBASIC1.15□□□□□ -2.23
CDC42EP4Q9H3Q1 RPL7P42-201ENST00000481005 679 ntBASIC1.15□□□□□ -2.23
CDC42EP4Q9H3Q1 RPL36AP21-201ENST00000490372 323 ntBASIC1.15□□□□□ -2.23
CDC42EP4Q9H3Q1 AC116353.2-201ENST00000505332 712 ntBASIC1.15□□□□□ -2.23
CDC42EP4Q9H3Q1 RNA5SP481-201ENST00000516814 122 ntBASIC1.15□□□□□ -2.23
CDC42EP4Q9H3Q1 Y_RNA.706-201ENST00000516933 99 ntBASIC1.15□□□□□ -2.23
CDC42EP4Q9H3Q1 AL121579.1-201ENST00000555129 305 ntBASIC1.15□□□□□ -2.23
CDC42EP4Q9H3Q1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.15□□□□□ -2.23
CDC42EP4Q9H3Q1 MIR5695-201ENST00000579717 85 ntBASIC1.15□□□□□ -2.23
CDC42EP4Q9H3Q1 AC125232.2-201ENST00000592457 143 ntBASIC1.15□□□□□ -2.23
CDC42EP4Q9H3Q1 AC010999.1-201ENST00000611856 324 ntBASIC1.15□□□□□ -2.23
CDC42EP4Q9H3Q1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.15□□□□□ -2.23
CDC42EP4Q9H3Q1 MIR26B-201ENST00000362251 77 ntBASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 MIR302D-201ENST00000362275 68 ntBASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 Y_RNA.2-201ENST00000362330 96 ntBASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 Y_RNA.160-201ENST00000363677 92 ntBASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 RNU6-414P-201ENST00000363705 104 ntBASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 RNU6-1240P-201ENST00000365155 104 ntBASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 MIR513A1-201ENST00000385138 129 ntBASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 RNA5SP467-201ENST00000391274 118 ntBASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 MIR190B-201ENST00000401119 79 ntBASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 EIF1P2-201ENST00000428233 350 ntBASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 USP9YP16-201ENST00000430287 407 ntBASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 AC073910.1-201ENST00000445047 438 ntBASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 USP9YP23-201ENST00000455085 407 ntBASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 HMGN1P13-201ENST00000505795 138 ntBASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 AC103851.1-201ENST00000506833 274 ntBASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 RNA5SP445-201ENST00000515889 115 ntBASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 RNA5SP102-201ENST00000516865 106 ntBASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 AC024995.1-201ENST00000523014 93 ntBASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 FRG2DP-202ENST00000566967 323 ntBASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 MIR4452-201ENST00000583004 71 ntBASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 AC022306.2-201ENST00000617563 647 ntBASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 AC095038.3-201ENST00000634439 195 ntBASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 MTND5P16-201ENST00000460269 1703 ntBASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 MTND5P35-201ENST00000557537 1720 ntBASIC1.14□□□□□ -2.23
CDC42EP4Q9H3Q1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.13□□□□□ -2.23
CDC42EP4Q9H3Q1 RNY1P16-201ENST00000363063 111 ntBASIC1.13□□□□□ -2.23
CDC42EP4Q9H3Q1 SNORA4.2-201ENST00000365313 147 ntBASIC1.13□□□□□ -2.23
CDC42EP4Q9H3Q1 Y_RNA.364-201ENST00000365532 101 ntBASIC1.13□□□□□ -2.23
CDC42EP4Q9H3Q1 RNU6-331P-201ENST00000384724 107 ntBASIC1.13□□□□□ -2.23
CDC42EP4Q9H3Q1 MIR1253-201ENST00000408273 105 ntBASIC1.13□□□□□ -2.23
CDC42EP4Q9H3Q1 RNU2-7P-201ENST00000410794 178 ntBASIC1.13□□□□□ -2.23
CDC42EP4Q9H3Q1 RNU4-14P-201ENST00000410858 122 ntBASIC1.13□□□□□ -2.23
CDC42EP4Q9H3Q1 RPL30P13-201ENST00000418873 348 ntBASIC1.13□□□□□ -2.23
CDC42EP4Q9H3Q1 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.13□□□□□ -2.23
CDC42EP4Q9H3Q1 RBMX2P4-201ENST00000441256 376 ntBASIC1.13□□□□□ -2.23
CDC42EP4Q9H3Q1 MTND4P18-201ENST00000447010 465 ntBASIC1.13□□□□□ -2.23
CDC42EP4Q9H3Q1 RPS27P1-201ENST00000450552 247 ntBASIC1.13□□□□□ -2.23
CDC42EP4Q9H3Q1 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.13□□□□□ -2.23
CDC42EP4Q9H3Q1 RNU7-128P-201ENST00000517247 62 ntBASIC1.13□□□□□ -2.23
CDC42EP4Q9H3Q1 AC091144.1-201ENST00000519573 138 ntBASIC1.13□□□□□ -2.23
CDC42EP4Q9H3Q1 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.13□□□□□ -2.23
CDC42EP4Q9H3Q1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.13□□□□□ -2.23
CDC42EP4Q9H3Q1 AC093023.1-201ENST00000547375 507 ntBASIC1.13□□□□□ -2.23
CDC42EP4Q9H3Q1 AL078603.1-201ENST00000603824 313 ntBASIC1.13□□□□□ -2.23
CDC42EP4Q9H3Q1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.13□□□□□ -2.23
CDC42EP4Q9H3Q1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CDC42EP4Q9H3Q1 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.12□□□□□ -2.23
CDC42EP4Q9H3Q1 MIR194-1-201ENST00000384892 85 ntBASIC1.12□□□□□ -2.23
CDC42EP4Q9H3Q1 MIR489-201ENST00000384923 84 ntBASIC1.12□□□□□ -2.23
CDC42EP4Q9H3Q1 MIR329-1-201ENST00000385028 80 ntBASIC1.12□□□□□ -2.23
CDC42EP4Q9H3Q1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
CDC42EP4Q9H3Q1 SNORA75.4-201ENST00000391278 119 ntBASIC1.12□□□□□ -2.23
CDC42EP4Q9H3Q1 RNU6-876P-201ENST00000391295 104 ntBASIC1.12□□□□□ -2.23
CDC42EP4Q9H3Q1 MIR1267-201ENST00000408723 78 ntBASIC1.12□□□□□ -2.23
CDC42EP4Q9H3Q1 RNU6-1001P-201ENST00000411265 100 ntBASIC1.12□□□□□ -2.23
CDC42EP4Q9H3Q1 FTH1P12-201ENST00000432137 551 ntBASIC1.12□□□□□ -2.23
CDC42EP4Q9H3Q1 AL353997.1-201ENST00000432936 108 ntBASIC1.12□□□□□ -2.23
CDC42EP4Q9H3Q1 AL606517.2-201ENST00000442855 241 ntBASIC1.12□□□□□ -2.23
CDC42EP4Q9H3Q1 snoU13.9-201ENST00000458927 103 ntBASIC1.12□□□□□ -2.23
CDC42EP4Q9H3Q1 snoU13.27-201ENST00000459278 104 ntBASIC1.12□□□□□ -2.23
CDC42EP4Q9H3Q1 RPS26P45-201ENST00000471748 340 ntBASIC1.12□□□□□ -2.23
CDC42EP4Q9H3Q1 AL163195.1-201ENST00000496941 348 ntBASIC1.12□□□□□ -2.23
CDC42EP4Q9H3Q1 Y_RNA.683-201ENST00000516508 93 ntBASIC1.12□□□□□ -2.23
CDC42EP4Q9H3Q1 AC090617.3-201ENST00000573670 475 ntBASIC1.12□□□□□ -2.23
CDC42EP4Q9H3Q1 SNORA4-201ENST00000584302 138 ntBASIC1.12□□□□□ -2.23
CDC42EP4Q9H3Q1 AC022432.1-201ENST00000595739 310 ntBASIC1.12□□□□□ -2.23
CDC42EP4Q9H3Q1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
CDC42EP4Q9H3Q1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.12□□□□□ -2.23
CDC42EP4Q9H3Q1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.11□□□□□ -2.23
CDC42EP4Q9H3Q1 SNORD81.2-201ENST00000365153 76 ntBASIC1.11□□□□□ -2.23
CDC42EP4Q9H3Q1 SNORD26-201ENST00000384147 75 ntBASIC1.11□□□□□ -2.23
CDC42EP4Q9H3Q1 RNU6-42P-201ENST00000384165 107 ntBASIC1.11□□□□□ -2.23
CDC42EP4Q9H3Q1 RNU6-1145P-201ENST00000384246 107 ntBASIC1.11□□□□□ -2.23
CDC42EP4Q9H3Q1 Y_RNA.557-201ENST00000384680 107 ntBASIC1.11□□□□□ -2.23
CDC42EP4Q9H3Q1 RNU6-700P-201ENST00000391043 107 ntBASIC1.11□□□□□ -2.23
CDC42EP4Q9H3Q1 RNU1-78P-201ENST00000391248 165 ntBASIC1.11□□□□□ -2.23
CDC42EP4Q9H3Q1 RPL21P1-201ENST00000399532 476 ntBASIC1.11□□□□□ -2.23
CDC42EP4Q9H3Q1 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.11□□□□□ -2.23
CDC42EP4Q9H3Q1 MTCYBP10-201ENST00000424905 650 ntBASIC1.11□□□□□ -2.23
CDC42EP4Q9H3Q1 U8.22-201ENST00000459141 133 ntBASIC1.11□□□□□ -2.23
CDC42EP4Q9H3Q1 MTND4P17-201ENST00000470444 350 ntBASIC1.11□□□□□ -2.23
CDC42EP4Q9H3Q1 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.11□□□□□ -2.23
CDC42EP4Q9H3Q1 SCARNA16.2-201ENST00000516520 172 ntBASIC1.11□□□□□ -2.23
CDC42EP4Q9H3Q1 AC005668.1-201ENST00000571142 476 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 262.6 ms