Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 AL162373.1-201ENST00000620433 407 ntBASIC2.08□□□□□ -2.08
USP44Q9H0E7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.08□□□□□ -2.08
USP44Q9H0E7 Y_RNA.28-201ENST00000362554 111 ntBASIC2.07□□□□□ -2.08
USP44Q9H0E7 Y_RNA.39-201ENST00000362620 98 ntBASIC2.07□□□□□ -2.08
USP44Q9H0E7 Y_RNA.148-201ENST00000363557 117 ntBASIC2.07□□□□□ -2.08
USP44Q9H0E7 SNORA72.2-201ENST00000365028 127 ntBASIC2.07□□□□□ -2.08
USP44Q9H0E7 SNORA8-201ENST00000384574 139 ntBASIC2.07□□□□□ -2.08
USP44Q9H0E7 MIR597-201ENST00000384968 97 ntBASIC2.07□□□□□ -2.08
USP44Q9H0E7 MIR1185-2-201ENST00000408687 86 ntBASIC2.07□□□□□ -2.08
USP44Q9H0E7 AC244636.1-201ENST00000421152 228 ntBASIC2.07□□□□□ -2.08
USP44Q9H0E7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.07□□□□□ -2.08
USP44Q9H0E7 AC069257.2-201ENST00000441819 155 ntBASIC2.07□□□□□ -2.08
USP44Q9H0E7 RPL23AP6-201ENST00000446637 472 ntBASIC2.07□□□□□ -2.08
USP44Q9H0E7 PCNPP5-201ENST00000452246 481 ntBASIC2.07□□□□□ -2.08
USP44Q9H0E7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.07□□□□□ -2.08
USP44Q9H0E7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.07□□□□□ -2.08
USP44Q9H0E7 AL442163.3-201ENST00000554110 156 ntBASIC2.07□□□□□ -2.08
USP44Q9H0E7 MIR5188-201ENST00000583467 113 ntBASIC2.07□□□□□ -2.08
USP44Q9H0E7 AL627230.6-201ENST00000611129 280 ntBASIC2.07□□□□□ -2.08
USP44Q9H0E7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
USP44Q9H0E7 RNU6-1266P-201ENST00000362794 105 ntBASIC2.06□□□□□ -2.08
USP44Q9H0E7 RNU6-1227P-201ENST00000383981 107 ntBASIC2.06□□□□□ -2.08
USP44Q9H0E7 MIR628-201ENST00000385229 95 ntBASIC2.06□□□□□ -2.08
USP44Q9H0E7 RNA5SP501-201ENST00000410990 112 ntBASIC2.06□□□□□ -2.08
USP44Q9H0E7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
USP44Q9H0E7 CST2P1-201ENST00000425770 87 ntBASIC2.06□□□□□ -2.08
USP44Q9H0E7 AL160004.2-201ENST00000432935 350 ntBASIC2.06□□□□□ -2.08
USP44Q9H0E7 AC016717.1-201ENST00000448918 286 ntBASIC2.06□□□□□ -2.08
USP44Q9H0E7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.06□□□□□ -2.08
USP44Q9H0E7 AC011406.1-201ENST00000512440 370 ntBASIC2.06□□□□□ -2.08
USP44Q9H0E7 Y_RNA.711-201ENST00000516993 102 ntBASIC2.06□□□□□ -2.08
USP44Q9H0E7 AC023442.1-201ENST00000531247 422 ntBASIC2.06□□□□□ -2.08
USP44Q9H0E7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.06□□□□□ -2.08
USP44Q9H0E7 AC008749.1-201ENST00000597650 306 ntBASIC2.06□□□□□ -2.08
USP44Q9H0E7 MIR502-201ENST00000606349 86 ntBASIC2.06□□□□□ -2.08
USP44Q9H0E7 AL353997.5-201ENST00000618886 171 ntBASIC2.06□□□□□ -2.08
USP44Q9H0E7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.06□□□□□ -2.08
USP44Q9H0E7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
USP44Q9H0E7 AC091812.1-201ENST00000432235 1948 ntBASIC2.05□□□□□ -2.08
USP44Q9H0E7 MIR410-201ENST00000362222 80 ntBASIC2.05□□□□□ -2.08
USP44Q9H0E7 RNU6-1240P-201ENST00000365155 104 ntBASIC2.05□□□□□ -2.08
USP44Q9H0E7 SNORA22B-201ENST00000383876 138 ntBASIC2.05□□□□□ -2.08
USP44Q9H0E7 RNU6-1264P-201ENST00000383891 107 ntBASIC2.05□□□□□ -2.08
USP44Q9H0E7 RNY3P4-201ENST00000384428 101 ntBASIC2.05□□□□□ -2.08
USP44Q9H0E7 MIR548B-201ENST00000385247 97 ntBASIC2.05□□□□□ -2.08
USP44Q9H0E7 SNORD12B-201ENST00000410433 91 ntBASIC2.05□□□□□ -2.08
USP44Q9H0E7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.05□□□□□ -2.08
USP44Q9H0E7 AL163540.1-201ENST00000485382 386 ntBASIC2.05□□□□□ -2.08
USP44Q9H0E7 MRPS17P9-201ENST00000511924 393 ntBASIC2.05□□□□□ -2.08
USP44Q9H0E7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
USP44Q9H0E7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.05□□□□□ -2.08
USP44Q9H0E7 AC024614.2-201ENST00000577584 372 ntBASIC2.05□□□□□ -2.08
USP44Q9H0E7 AC006435.5-201ENST00000624486 112 ntBASIC2.05□□□□□ -2.08
USP44Q9H0E7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
USP44Q9H0E7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
USP44Q9H0E7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
USP44Q9H0E7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
USP44Q9H0E7 RNU6-1310P-201ENST00000384153 107 ntBASIC2.04□□□□□ -2.08
USP44Q9H0E7 RNU6-57P-201ENST00000411348 103 ntBASIC2.04□□□□□ -2.08
USP44Q9H0E7 ELOCP21-201ENST00000412558 336 ntBASIC2.04□□□□□ -2.08
USP44Q9H0E7 AC009310.1-201ENST00000414414 451 ntBASIC2.04□□□□□ -2.08
USP44Q9H0E7 MTCO3P19-201ENST00000415864 321 ntBASIC2.04□□□□□ -2.08
USP44Q9H0E7 AC060773.1-201ENST00000421698 310 ntBASIC2.04□□□□□ -2.08
USP44Q9H0E7 AC005534.2-201ENST00000431047 433 ntBASIC2.04□□□□□ -2.08
USP44Q9H0E7 UQCRBP2-201ENST00000447827 297 ntBASIC2.04□□□□□ -2.08
USP44Q9H0E7 SUMO1P2-201ENST00000452524 304 ntBASIC2.04□□□□□ -2.08
USP44Q9H0E7 AC010469.2-201ENST00000496412 480 ntBASIC2.04□□□□□ -2.08
USP44Q9H0E7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.04□□□□□ -2.08
USP44Q9H0E7 SNORA25.10-201ENST00000515926 124 ntBASIC2.04□□□□□ -2.08
USP44Q9H0E7 SNORA40.14-201ENST00000516543 86 ntBASIC2.04□□□□□ -2.08
USP44Q9H0E7 AC025647.1-201ENST00000517879 253 ntBASIC2.04□□□□□ -2.08
USP44Q9H0E7 AC024995.1-201ENST00000523014 93 ntBASIC2.04□□□□□ -2.08
USP44Q9H0E7 SUB1P4-201ENST00000566062 339 ntBASIC2.04□□□□□ -2.08
USP44Q9H0E7 AL356055.1-201ENST00000602528 446 ntBASIC2.04□□□□□ -2.08
USP44Q9H0E7 AC010900.2-201ENST00000604508 210 ntBASIC2.04□□□□□ -2.08
USP44Q9H0E7 AC069114.2-201ENST00000604699 304 ntBASIC2.04□□□□□ -2.08
USP44Q9H0E7 uc_338.20-201ENST00000621563 178 ntBASIC2.04□□□□□ -2.08
USP44Q9H0E7 Y_RNA.27-201ENST00000362540 103 ntBASIC2.03□□□□□ -2.08
USP44Q9H0E7 RNU6-1019P-201ENST00000364424 107 ntBASIC2.03□□□□□ -2.08
USP44Q9H0E7 MIR1302-11-201ENST00000408051 138 ntBASIC2.03□□□□□ -2.08
USP44Q9H0E7 MIR1253-201ENST00000408273 105 ntBASIC2.03□□□□□ -2.08
USP44Q9H0E7 MIR1302-9-201ENST00000408365 138 ntBASIC2.03□□□□□ -2.08
USP44Q9H0E7 MIR1302-10-201ENST00000408734 138 ntBASIC2.03□□□□□ -2.08
USP44Q9H0E7 RNU2-40P-201ENST00000410833 196 ntBASIC2.03□□□□□ -2.08
USP44Q9H0E7 EBAG9P1-201ENST00000418955 543 ntBASIC2.03□□□□□ -2.08
USP44Q9H0E7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.03□□□□□ -2.08
USP44Q9H0E7 RNU6-475P-201ENST00000516073 104 ntBASIC2.03□□□□□ -2.08
USP44Q9H0E7 HSBP1P1-201ENST00000555205 166 ntBASIC2.03□□□□□ -2.08
USP44Q9H0E7 AL096840.1-201ENST00000603287 93 ntBASIC2.03□□□□□ -2.08
USP44Q9H0E7 MIR1302-2-201ENST00000607096 138 ntBASIC2.03□□□□□ -2.08
USP44Q9H0E7 CENPCP1-201ENST00000533085 2578 ntBASIC2.03□□□□□ -2.09
USP44Q9H0E7 AC005592.1-201ENST00000566527 1640 ntBASIC2.02□□□□□ -2.09
USP44Q9H0E7 snoU2-30.2-201ENST00000362805 70 ntBASIC2.02□□□□□ -2.09
USP44Q9H0E7 RNU6-457P-201ENST00000363999 107 ntBASIC2.02□□□□□ -2.09
USP44Q9H0E7 RNU6-926P-201ENST00000384075 107 ntBASIC2.02□□□□□ -2.09
USP44Q9H0E7 RNU11-5P-201ENST00000391216 129 ntBASIC2.02□□□□□ -2.09
USP44Q9H0E7 Y_RNA.645-201ENST00000391229 102 ntBASIC2.02□□□□□ -2.09
USP44Q9H0E7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.02□□□□□ -2.09
USP44Q9H0E7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.02□□□□□ -2.09
USP44Q9H0E7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 180.7 ms