Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 SNORA33-201ENST00000363664 130 ntBASIC1.91□□□□□ -2.1
ABCD3P28288 Y_RNA.419-201ENST00000384041 102 ntBASIC1.91□□□□□ -2.1
ABCD3P28288 RNU6-926P-201ENST00000384075 107 ntBASIC1.91□□□□□ -2.1
ABCD3P28288 RPS20P15-201ENST00000412792 311 ntBASIC1.91□□□□□ -2.1
ABCD3P28288 AC010154.1-201ENST00000425857 269 ntBASIC1.91□□□□□ -2.1
ABCD3P28288 RPS26P45-201ENST00000471748 340 ntBASIC1.91□□□□□ -2.1
ABCD3P28288 RPS27P22-201ENST00000478056 241 ntBASIC1.91□□□□□ -2.1
ABCD3P28288 RNU7-99P-201ENST00000516271 62 ntBASIC1.91□□□□□ -2.1
ABCD3P28288 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.91□□□□□ -2.1
ABCD3P28288 MIR4659A-201ENST00000580269 81 ntBASIC1.91□□□□□ -2.1
ABCD3P28288 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.91□□□□□ -2.1
ABCD3P28288 MIR5188-201ENST00000583467 113 ntBASIC1.91□□□□□ -2.1
ABCD3P28288 MIR4438-201ENST00000585271 93 ntBASIC1.91□□□□□ -2.1
ABCD3P28288 RPS29P30-201ENST00000600975 111 ntBASIC1.91□□□□□ -2.1
ABCD3P28288 U6.92-201ENST00000636464 89 ntBASIC1.91□□□□□ -2.1
ABCD3P28288 SNORD114-7-201ENST00000362520 77 ntBASIC1.9□□□□□ -2.11
ABCD3P28288 RNA5SP138-201ENST00000365098 114 ntBASIC1.9□□□□□ -2.11
ABCD3P28288 SNORA20B-201ENST00000384220 132 ntBASIC1.9□□□□□ -2.11
ABCD3P28288 RNY1P14-201ENST00000384426 108 ntBASIC1.9□□□□□ -2.11
ABCD3P28288 RNU6-950P-201ENST00000384651 107 ntBASIC1.9□□□□□ -2.11
ABCD3P28288 RNU6-360P-201ENST00000390944 104 ntBASIC1.9□□□□□ -2.11
ABCD3P28288 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.9□□□□□ -2.11
ABCD3P28288 HSPE1P9-201ENST00000440046 311 ntBASIC1.9□□□□□ -2.11
ABCD3P28288 RNU6-717P-201ENST00000459076 104 ntBASIC1.9□□□□□ -2.11
ABCD3P28288 snoU13.26-201ENST00000459452 105 ntBASIC1.9□□□□□ -2.11
ABCD3P28288 AC010469.2-201ENST00000496412 480 ntBASIC1.9□□□□□ -2.11
ABCD3P28288 RPL23AP63-201ENST00000498752 471 ntBASIC1.9□□□□□ -2.11
ABCD3P28288 AC093852.1-201ENST00000503587 266 ntBASIC1.9□□□□□ -2.11
ABCD3P28288 AC025465.3-201ENST00000510570 311 ntBASIC1.9□□□□□ -2.11
ABCD3P28288 RNA5SP437-201ENST00000517249 129 ntBASIC1.9□□□□□ -2.11
ABCD3P28288 AP002001.1-203ENST00000534002 267 ntBASIC1.9□□□□□ -2.11
ABCD3P28288 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.9□□□□□ -2.11
ABCD3P28288 MIR3198-2-201ENST00000577868 80 ntBASIC1.9□□□□□ -2.11
ABCD3P28288 AC005828.6-201ENST00000606610 232 ntBASIC1.9□□□□□ -2.11
ABCD3P28288 AC006157.1-201ENST00000611750 366 ntBASIC1.9□□□□□ -2.11
ABCD3P28288 U6.115-201ENST00000636045 103 ntBASIC1.9□□□□□ -2.11
ABCD3P28288 MIR369-201ENST00000362155 70 ntBASIC1.89□□□□□ -2.11
ABCD3P28288 RNU6-961P-201ENST00000363893 105 ntBASIC1.89□□□□□ -2.11
ABCD3P28288 Y_RNA.230-201ENST00000364348 109 ntBASIC1.89□□□□□ -2.11
ABCD3P28288 Y_RNA.445-201ENST00000384168 102 ntBASIC1.89□□□□□ -2.11
ABCD3P28288 MIR504-201ENST00000385065 83 ntBASIC1.89□□□□□ -2.11
ABCD3P28288 AL355796.1-201ENST00000406706 323 ntBASIC1.89□□□□□ -2.11
ABCD3P28288 RNU6-1186P-201ENST00000410429 97 ntBASIC1.89□□□□□ -2.11
ABCD3P28288 AL139156.1-201ENST00000412785 841 ntBASIC1.89□□□□□ -2.11
ABCD3P28288 AL445646.1-201ENST00000431784 216 ntBASIC1.89□□□□□ -2.11
ABCD3P28288 RNU7-94P-201ENST00000459576 63 ntBASIC1.89□□□□□ -2.11
ABCD3P28288 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.89□□□□□ -2.11
ABCD3P28288 AL163195.1-201ENST00000496941 348 ntBASIC1.89□□□□□ -2.11
ABCD3P28288 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
ABCD3P28288 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.89□□□□□ -2.11
ABCD3P28288 IGKV3-31-201ENST00000523109 329 ntBASIC1.89□□□□□ -2.11
ABCD3P28288 HSBP1P1-201ENST00000555205 166 ntBASIC1.89□□□□□ -2.11
ABCD3P28288 AC005176.2-201ENST00000596933 147 ntBASIC1.89□□□□□ -2.11
ABCD3P28288 AC006380.1-201ENST00000603598 186 ntBASIC1.89□□□□□ -2.11
ABCD3P28288 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.89□□□□□ -2.11
ABCD3P28288 AC004467.1-201ENST00000615678 330 ntBASIC1.89□□□□□ -2.11
ABCD3P28288 AC240442.1-201ENST00000616055 283 ntBASIC1.89□□□□□ -2.11
ABCD3P28288 AC010205.1-201ENST00000616668 449 ntBASIC1.89□□□□□ -2.11
ABCD3P28288 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
ABCD3P28288 AL356292.1-201ENST00000283110 373 ntBASIC1.88□□□□□ -2.11
ABCD3P28288 SNORA27.1-201ENST00000362604 124 ntBASIC1.88□□□□□ -2.11
ABCD3P28288 RNU6-414P-201ENST00000363705 104 ntBASIC1.88□□□□□ -2.11
ABCD3P28288 RNU6-454P-201ENST00000364292 107 ntBASIC1.88□□□□□ -2.11
ABCD3P28288 Y_RNA.243-201ENST00000364481 109 ntBASIC1.88□□□□□ -2.11
ABCD3P28288 MIR30A-201ENST00000385092 71 ntBASIC1.88□□□□□ -2.11
ABCD3P28288 MIR873-201ENST00000401120 77 ntBASIC1.88□□□□□ -2.11
ABCD3P28288 RNA5SP338-201ENST00000410495 85 ntBASIC1.88□□□□□ -2.11
ABCD3P28288 RNA5SP489-201ENST00000410986 109 ntBASIC1.88□□□□□ -2.11
ABCD3P28288 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.88□□□□□ -2.11
ABCD3P28288 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.88□□□□□ -2.11
ABCD3P28288 RNA5SP364-201ENST00000516938 78 ntBASIC1.88□□□□□ -2.11
ABCD3P28288 AC027419.1-201ENST00000522976 328 ntBASIC1.88□□□□□ -2.11
ABCD3P28288 AL121655.1-201ENST00000605811 308 ntBASIC1.88□□□□□ -2.11
ABCD3P28288 SNORD58B-201ENST00000607313 66 ntBASIC1.88□□□□□ -2.11
ABCD3P28288 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.88□□□□□ -2.11
ABCD3P28288 MIR8074-201ENST00000615081 81 ntBASIC1.88□□□□□ -2.11
ABCD3P28288 uc_338.20-201ENST00000621563 178 ntBASIC1.88□□□□□ -2.11
ABCD3P28288 U6.108-201ENST00000637764 58 ntBASIC1.88□□□□□ -2.11
ABCD3P28288 MTND4P29-201ENST00000503122 1372 ntBASIC1.87□□□□□ -2.11
ABCD3P28288 RNU6-708P-201ENST00000384217 107 ntBASIC1.87□□□□□ -2.11
ABCD3P28288 AL079342.1-201ENST00000401460 267 ntBASIC1.87□□□□□ -2.11
ABCD3P28288 RNU2-40P-201ENST00000410833 196 ntBASIC1.87□□□□□ -2.11
ABCD3P28288 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.87□□□□□ -2.11
ABCD3P28288 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
ABCD3P28288 AC073910.1-201ENST00000445047 438 ntBASIC1.87□□□□□ -2.11
ABCD3P28288 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.87□□□□□ -2.11
ABCD3P28288 snoU13.27-201ENST00000459278 104 ntBASIC1.87□□□□□ -2.11
ABCD3P28288 AC097462.1-201ENST00000514125 324 ntBASIC1.87□□□□□ -2.11
ABCD3P28288 RNA5SP20-201ENST00000515976 84 ntBASIC1.87□□□□□ -2.11
ABCD3P28288 Y_RNA.713-201ENST00000517013 96 ntBASIC1.87□□□□□ -2.11
ABCD3P28288 RNU2-12P-201ENST00000517216 168 ntBASIC1.87□□□□□ -2.11
ABCD3P28288 RNU7-128P-201ENST00000517247 62 ntBASIC1.87□□□□□ -2.11
ABCD3P28288 AC023157.2-201ENST00000540596 141 ntBASIC1.87□□□□□ -2.11
ABCD3P28288 Y_RNA.772-201ENST00000606692 102 ntBASIC1.87□□□□□ -2.11
ABCD3P28288 Y_RNA.783-201ENST00000613546 102 ntBASIC1.87□□□□□ -2.11
ABCD3P28288 MIR7843-201ENST00000622274 79 ntBASIC1.87□□□□□ -2.11
ABCD3P28288 ZNF72P-201ENST00000425869 1908 ntBASIC1.86□□□□□ -2.11
ABCD3P28288 RNU4-50P-201ENST00000364361 141 ntBASIC1.86□□□□□ -2.11
ABCD3P28288 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
ABCD3P28288 MIR1302-11-201ENST00000408051 138 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms