Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.27□□□□□ -2.45
CXCL1P09341 RNU6-679P-201ENST00000391003 106 ntBASIC-0.27□□□□□ -2.45
CXCL1P09341 MIR1287-201ENST00000408492 90 ntBASIC-0.27□□□□□ -2.45
CXCL1P09341 MIR1298-201ENST00000408783 112 ntBASIC-0.27□□□□□ -2.45
CXCL1P09341 AC005534.2-201ENST00000431047 433 ntBASIC-0.27□□□□□ -2.45
CXCL1P09341 RPS3AP17-201ENST00000472594 777 ntBASIC-0.27□□□□□ -2.45
CXCL1P09341 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.27□□□□□ -2.45
CXCL1P09341 MTND2P38-201ENST00000522536 667 ntBASIC-0.27□□□□□ -2.45
CXCL1P09341 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.27□□□□□ -2.45
CXCL1P09341 MIR3678-201ENST00000578455 94 ntBASIC-0.27□□□□□ -2.45
CXCL1P09341 AC090517.2-201ENST00000614966 680 ntBASIC-0.27□□□□□ -2.45
CXCL1P09341 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.27□□□□□ -2.45
CXCL1P09341 MIR330-201ENST00000362196 94 ntBASIC-0.28□□□□□ -2.45
CXCL1P09341 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.28□□□□□ -2.45
CXCL1P09341 MIR136-201ENST00000385207 82 ntBASIC-0.28□□□□□ -2.45
CXCL1P09341 SNORD73A-201ENST00000386062 65 ntBASIC-0.28□□□□□ -2.45
CXCL1P09341 MIR450B-201ENST00000401182 78 ntBASIC-0.28□□□□□ -2.45
CXCL1P09341 MTND4P18-201ENST00000447010 465 ntBASIC-0.28□□□□□ -2.45
CXCL1P09341 snoU13.18-201ENST00000459483 104 ntBASIC-0.28□□□□□ -2.45
CXCL1P09341 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.28□□□□□ -2.45
CXCL1P09341 Y_RNA.676-201ENST00000516393 96 ntBASIC-0.28□□□□□ -2.45
CXCL1P09341 MIR2115-201ENST00000516657 100 ntBASIC-0.28□□□□□ -2.45
CXCL1P09341 MTND1P35-201ENST00000526739 508 ntBASIC-0.28□□□□□ -2.45
CXCL1P09341 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.28□□□□□ -2.45
CXCL1P09341 AC023442.1-201ENST00000531247 422 ntBASIC-0.28□□□□□ -2.45
CXCL1P09341 MTND4P33-201ENST00000556706 766 ntBASIC-0.28□□□□□ -2.45
CXCL1P09341 RN7SL793P-201ENST00000583259 296 ntBASIC-0.28□□□□□ -2.45
CXCL1P09341 SNORA25.18-201ENST00000607153 114 ntBASIC-0.28□□□□□ -2.45
CXCL1P09341 U2.17-201ENST00000611454 95 ntBASIC-0.28□□□□□ -2.45
CXCL1P09341 MIR1295B-201ENST00000636144 60 ntBASIC-0.28□□□□□ -2.45
CXCL1P09341 RNU6-580P-201ENST00000365159 107 ntBASIC-0.29□□□□□ -2.46
CXCL1P09341 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.29□□□□□ -2.46
CXCL1P09341 AC117470.1-201ENST00000381974 330 ntBASIC-0.29□□□□□ -2.46
CXCL1P09341 MIR518E-201ENST00000385252 88 ntBASIC-0.29□□□□□ -2.46
CXCL1P09341 MIR644A-201ENST00000385262 94 ntBASIC-0.29□□□□□ -2.46
CXCL1P09341 AL049545.1-201ENST00000401856 572 ntBASIC-0.29□□□□□ -2.46
CXCL1P09341 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.29□□□□□ -2.46
CXCL1P09341 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.29□□□□□ -2.46
CXCL1P09341 MIR548AO-201ENST00000579992 96 ntBASIC-0.29□□□□□ -2.46
CXCL1P09341 AC006566.1-201ENST00000608943 513 ntBASIC-0.29□□□□□ -2.46
CXCL1P09341 RNU6-500P-201ENST00000362349 107 ntBASIC-0.3□□□□□ -2.46
CXCL1P09341 SNORD114-5-201ENST00000362928 70 ntBASIC-0.3□□□□□ -2.46
CXCL1P09341 U8.7-201ENST00000364940 136 ntBASIC-0.3□□□□□ -2.46
CXCL1P09341 RNU6V-201ENST00000384105 107 ntBASIC-0.3□□□□□ -2.46
CXCL1P09341 RNU6-784P-201ENST00000384330 106 ntBASIC-0.3□□□□□ -2.46
CXCL1P09341 SNORA8.2-201ENST00000384372 139 ntBASIC-0.3□□□□□ -2.46
CXCL1P09341 MIR487A-201ENST00000385009 80 ntBASIC-0.3□□□□□ -2.46
CXCL1P09341 SNORA75.6-201ENST00000391318 127 ntBASIC-0.3□□□□□ -2.46
CXCL1P09341 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.3□□□□□ -2.46
CXCL1P09341 RNU2-29P-201ENST00000410423 189 ntBASIC-0.3□□□□□ -2.46
CXCL1P09341 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.3□□□□□ -2.46
CXCL1P09341 AC243428.1-201ENST00000421099 264 ntBASIC-0.3□□□□□ -2.46
CXCL1P09341 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.3□□□□□ -2.46
CXCL1P09341 RPL23AP75-201ENST00000491601 451 ntBASIC-0.3□□□□□ -2.46
CXCL1P09341 AC114811.1-201ENST00000507207 168 ntBASIC-0.3□□□□□ -2.46
CXCL1P09341 RNU6-977P-201ENST00000516411 103 ntBASIC-0.3□□□□□ -2.46
CXCL1P09341 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.3□□□□□ -2.46
CXCL1P09341 AL137161.1-201ENST00000532231 390 ntBASIC-0.3□□□□□ -2.46
CXCL1P09341 SCOCP1-201ENST00000554676 349 ntBASIC-0.3□□□□□ -2.46
CXCL1P09341 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.3□□□□□ -2.46
CXCL1P09341 MIR4743-201ENST00000584576 69 ntBASIC-0.3□□□□□ -2.46
CXCL1P09341 MIR377-201ENST00000362145 69 ntBASIC-0.31□□□□□ -2.46
CXCL1P09341 SNORA9.1-201ENST00000362412 131 ntBASIC-0.31□□□□□ -2.46
CXCL1P09341 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.31□□□□□ -2.46
CXCL1P09341 RNU6-514P-201ENST00000384208 107 ntBASIC-0.31□□□□□ -2.46
CXCL1P09341 MIR193B-201ENST00000384907 83 ntBASIC-0.31□□□□□ -2.46
CXCL1P09341 MIR1-2-201ENST00000384961 85 ntBASIC-0.31□□□□□ -2.46
CXCL1P09341 RNA5SP95-201ENST00000410319 137 ntBASIC-0.31□□□□□ -2.46
CXCL1P09341 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.31□□□□□ -2.46
CXCL1P09341 RNU2-59P-201ENST00000410482 191 ntBASIC-0.31□□□□□ -2.46
CXCL1P09341 NDUFA5P4-201ENST00000436704 385 ntBASIC-0.31□□□□□ -2.46
CXCL1P09341 AC107401.1-201ENST00000503426 685 ntBASIC-0.31□□□□□ -2.46
CXCL1P09341 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.31□□□□□ -2.46
CXCL1P09341 RNU4-5P-201ENST00000607255 135 ntBASIC-0.31□□□□□ -2.46
CXCL1P09341 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.31□□□□□ -2.46
CXCL1P09341 Y_RNA.122-201ENST00000363331 96 ntBASIC-0.32□□□□□ -2.46
CXCL1P09341 U8.5-201ENST00000364528 136 ntBASIC-0.32□□□□□ -2.46
CXCL1P09341 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.32□□□□□ -2.46
CXCL1P09341 RNY1P4-201ENST00000384595 115 ntBASIC-0.32□□□□□ -2.46
CXCL1P09341 MIR610-201ENST00000385139 96 ntBASIC-0.32□□□□□ -2.46
CXCL1P09341 SNORD100-201ENST00000408573 76 ntBASIC-0.32□□□□□ -2.46
CXCL1P09341 PIGPP3-201ENST00000425307 415 ntBASIC-0.32□□□□□ -2.46
CXCL1P09341 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.32□□□□□ -2.46
CXCL1P09341 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.32□□□□□ -2.46
CXCL1P09341 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.32□□□□□ -2.46
CXCL1P09341 AC091951.3-201ENST00000504093 246 ntBASIC-0.32□□□□□ -2.46
CXCL1P09341 SNORA25.14-201ENST00000516481 132 ntBASIC-0.32□□□□□ -2.46
CXCL1P09341 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.32□□□□□ -2.46
CXCL1P09341 MIR3684-201ENST00000579779 74 ntBASIC-0.32□□□□□ -2.46
CXCL1P09341 MIR3682-201ENST00000581338 84 ntBASIC-0.32□□□□□ -2.46
CXCL1P09341 MIR4804-201ENST00000581683 73 ntBASIC-0.32□□□□□ -2.46
CXCL1P09341 MIR7844-201ENST00000616161 122 ntBASIC-0.32□□□□□ -2.46
CXCL1P09341 AC010608.3-201ENST00000625048 527 ntBASIC-0.32□□□□□ -2.46
CXCL1P09341 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.32□□□□□ -2.46
CXCL1P09341 MIR4251-201ENST00000635819 61 ntBASIC-0.32□□□□□ -2.46
CXCL1P09341 MTND4P12-201ENST00000498999 1377 ntBASIC-0.32□□□□□ -2.46
CXCL1P09341 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
CXCL1P09341 RNY1-201ENST00000364228 113 ntBASIC-0.33□□□□□ -2.46
CXCL1P09341 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.33□□□□□ -2.46
CXCL1P09341 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 216.2 ms