Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AL031274.2-201ENST00000599419 203 ntBASIC4.04□□□□□ -1.76
CCDC85AQ96PX6 uc_338.1-201ENST00000612113 180 ntBASIC4.04□□□□□ -1.76
CCDC85AQ96PX6 AP003122.5-201ENST00000527668 3766 ntBASIC4.04□□□□□ -1.76
CCDC85AQ96PX6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC85AQ96PX6 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
CCDC85AQ96PX6 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC85AQ96PX6 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CCDC85AQ96PX6 MIR422A-201ENST00000362286 90 ntBASIC4.03□□□□□ -1.76
CCDC85AQ96PX6 RNU6-1082P-201ENST00000364574 107 ntBASIC4.03□□□□□ -1.76
CCDC85AQ96PX6 Y_RNA.692-201ENST00000516627 105 ntBASIC4.03□□□□□ -1.76
CCDC85AQ96PX6 MIR2682-201ENST00000580305 110 ntBASIC4.03□□□□□ -1.76
CCDC85AQ96PX6 AC093732.2-201ENST00000607950 274 ntBASIC4.03□□□□□ -1.76
CCDC85AQ96PX6 RNVU1-4-201ENST00000612985 164 ntBASIC4.03□□□□□ -1.76
CCDC85AQ96PX6 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC85AQ96PX6 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC85AQ96PX6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.03□□□□□ -1.77
CCDC85AQ96PX6 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC85AQ96PX6 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC85AQ96PX6 AL356292.1-201ENST00000283110 373 ntBASIC4.02□□□□□ -1.77
CCDC85AQ96PX6 RNU4-13P-201ENST00000364019 141 ntBASIC4.02□□□□□ -1.77
CCDC85AQ96PX6 RNU6-234P-201ENST00000365229 104 ntBASIC4.02□□□□□ -1.77
CCDC85AQ96PX6 MIR634-201ENST00000385208 97 ntBASIC4.02□□□□□ -1.77
CCDC85AQ96PX6 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC85AQ96PX6 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC85AQ96PX6 AC083906.5-201ENST00000503722 328 ntBASIC4.02□□□□□ -1.77
CCDC85AQ96PX6 RNU6-1299P-201ENST00000516316 100 ntBASIC4.02□□□□□ -1.77
CCDC85AQ96PX6 RNU6-948P-201ENST00000516374 107 ntBASIC4.02□□□□□ -1.77
CCDC85AQ96PX6 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC85AQ96PX6 EIF4BP1-201ENST00000554881 351 ntBASIC4.02□□□□□ -1.77
CCDC85AQ96PX6 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC85AQ96PX6 AC023043.3-201ENST00000593113 385 ntBASIC4.02□□□□□ -1.77
CCDC85AQ96PX6 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 RNU6-486P-201ENST00000363116 107 ntBASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 Y_RNA.111-201ENST00000363248 100 ntBASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 SNORD31B-201ENST00000364977 69 ntBASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 RNU6-1083P-201ENST00000384022 107 ntBASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 SNORD14D-201ENST00000384390 87 ntBASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 RNY4P18-201ENST00000391107 89 ntBASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 RNU4-47P-201ENST00000410876 114 ntBASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 RNU6-57P-201ENST00000411348 103 ntBASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 AC008134.1-201ENST00000420943 193 ntBASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 AC002075.2-201ENST00000425207 252 ntBASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 AL353705.1-201ENST00000433468 480 ntBASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 S100A11P2-201ENST00000467589 312 ntBASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 CYCTP-201ENST00000504253 315 ntBASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 RNU6-1231P-201ENST00000517185 103 ntBASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 AC109329.2-201ENST00000519658 482 ntBASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 MIR2681-201ENST00000581814 105 ntBASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 AL021707.8-201ENST00000609428 183 ntBASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 U6.95-201ENST00000636931 70 ntBASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CCDC85AQ96PX6 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4□□□□□ -1.77
CCDC85AQ96PX6 RNA5SP354-201ENST00000391247 136 ntBASIC4□□□□□ -1.77
CCDC85AQ96PX6 AC023449.1-201ENST00000454464 154 ntBASIC4□□□□□ -1.77
CCDC85AQ96PX6 AL031183.1-201ENST00000457667 207 ntBASIC4□□□□□ -1.77
CCDC85AQ96PX6 RPL23AP67-201ENST00000465341 474 ntBASIC4□□□□□ -1.77
CCDC85AQ96PX6 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4□□□□□ -1.77
CCDC85AQ96PX6 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC85AQ96PX6 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4□□□□□ -1.77
CCDC85AQ96PX6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC4□□□□□ -1.77
CCDC85AQ96PX6 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4□□□□□ -1.77
CCDC85AQ96PX6 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4□□□□□ -1.77
CCDC85AQ96PX6 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC85AQ96PX6 Y_RNA.120-201ENST00000363304 110 ntBASIC3.99□□□□□ -1.77
CCDC85AQ96PX6 RNY1P11-201ENST00000363759 113 ntBASIC3.99□□□□□ -1.77
CCDC85AQ96PX6 CD24P4-201ENST00000382840 243 ntBASIC3.99□□□□□ -1.77
CCDC85AQ96PX6 SNORA72-201ENST00000384339 132 ntBASIC3.99□□□□□ -1.77
CCDC85AQ96PX6 RNU6-429P-201ENST00000384582 108 ntBASIC3.99□□□□□ -1.77
CCDC85AQ96PX6 RNA5SP229-201ENST00000410809 99 ntBASIC3.99□□□□□ -1.77
CCDC85AQ96PX6 AL158823.1-201ENST00000418441 478 ntBASIC3.99□□□□□ -1.77
CCDC85AQ96PX6 AC010531.2-201ENST00000465012 153 ntBASIC3.99□□□□□ -1.77
CCDC85AQ96PX6 AC008885.1-201ENST00000514930 301 ntBASIC3.99□□□□□ -1.77
CCDC85AQ96PX6 Y_RNA.709-201ENST00000516952 92 ntBASIC3.99□□□□□ -1.77
CCDC85AQ96PX6 MIR3914-2-201ENST00000637339 95 ntBASIC3.99□□□□□ -1.77
CCDC85AQ96PX6 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC85AQ96PX6 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC85AQ96PX6 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC85AQ96PX6 RNU6-484P-201ENST00000384016 107 ntBASIC3.98□□□□□ -1.77
CCDC85AQ96PX6 RNU6-1235P-201ENST00000384559 107 ntBASIC3.98□□□□□ -1.77
CCDC85AQ96PX6 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC85AQ96PX6 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.98□□□□□ -1.77
CCDC85AQ96PX6 AC025750.2-201ENST00000442609 450 ntBASIC3.98□□□□□ -1.77
CCDC85AQ96PX6 RNU6-498P-201ENST00000459468 107 ntBASIC3.98□□□□□ -1.77
CCDC85AQ96PX6 RPL27AP5-201ENST00000469428 449 ntBASIC3.98□□□□□ -1.77
CCDC85AQ96PX6 MIR449C-201ENST00000516047 92 ntBASIC3.98□□□□□ -1.77
CCDC85AQ96PX6 RNA5SP153-201ENST00000516498 76 ntBASIC3.98□□□□□ -1.77
CCDC85AQ96PX6 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC85AQ96PX6 MIR6129-201ENST00000616087 109 ntBASIC3.98□□□□□ -1.77
CCDC85AQ96PX6 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
CCDC85AQ96PX6 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC85AQ96PX6 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC85AQ96PX6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC85AQ96PX6 Z82209.1-201ENST00000422141 2135 ntBASIC3.97□□□□□ -1.77
CCDC85AQ96PX6 MIR30E-201ENST00000362104 92 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms