Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.53□□□□□ -2
TRIM43Q96BQ3 AC245102.2-201ENST00000448956 180 ntBASIC2.53□□□□□ -2
TRIM43Q96BQ3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.53□□□□□ -2
TRIM43Q96BQ3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.53□□□□□ -2
TRIM43Q96BQ3 RNU2-34P-201ENST00000516534 121 ntBASIC2.53□□□□□ -2
TRIM43Q96BQ3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.53□□□□□ -2
TRIM43Q96BQ3 MIR5007-201ENST00000583098 95 ntBASIC2.53□□□□□ -2
TRIM43Q96BQ3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.53□□□□□ -2
TRIM43Q96BQ3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.53□□□□□ -2.01
TRIM43Q96BQ3 MIR410-201ENST00000362222 80 ntBASIC2.52□□□□□ -2.01
TRIM43Q96BQ3 Y_RNA.47-201ENST00000362697 108 ntBASIC2.52□□□□□ -2.01
TRIM43Q96BQ3 Y_RNA.99-201ENST00000363138 105 ntBASIC2.52□□□□□ -2.01
TRIM43Q96BQ3 SNORD63-201ENST00000384262 68 ntBASIC2.52□□□□□ -2.01
TRIM43Q96BQ3 U8.13-201ENST00000390842 128 ntBASIC2.52□□□□□ -2.01
TRIM43Q96BQ3 MIR1302-3-201ENST00000408128 138 ntBASIC2.52□□□□□ -2.01
TRIM43Q96BQ3 RNU2-20P-201ENST00000410425 191 ntBASIC2.52□□□□□ -2.01
TRIM43Q96BQ3 IPO7P1-201ENST00000442031 636 ntBASIC2.52□□□□□ -2.01
TRIM43Q96BQ3 DYNLT3P2-201ENST00000442517 295 ntBASIC2.52□□□□□ -2.01
TRIM43Q96BQ3 AL139109.1-201ENST00000455491 297 ntBASIC2.52□□□□□ -2.01
TRIM43Q96BQ3 HMGN1P10-201ENST00000474557 553 ntBASIC2.52□□□□□ -2.01
TRIM43Q96BQ3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.52□□□□□ -2.01
TRIM43Q96BQ3 RNU6-295P-201ENST00000516901 104 ntBASIC2.52□□□□□ -2.01
TRIM43Q96BQ3 AC136932.1-201ENST00000574771 208 ntBASIC2.52□□□□□ -2.01
TRIM43Q96BQ3 MIR4300-201ENST00000581016 96 ntBASIC2.52□□□□□ -2.01
TRIM43Q96BQ3 MIR5092-201ENST00000583139 88 ntBASIC2.52□□□□□ -2.01
TRIM43Q96BQ3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM43Q96BQ3 AC011373.1-201ENST00000607270 237 ntBASIC2.52□□□□□ -2.01
TRIM43Q96BQ3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.52□□□□□ -2.01
TRIM43Q96BQ3 snoZ196.1-201ENST00000625269 89 ntBASIC2.52□□□□□ -2.01
TRIM43Q96BQ3 AC007336.1-201ENST00000576365 3828 ntBASIC2.51□□□□□ -2.01
TRIM43Q96BQ3 AC092881.1-201ENST00000638218 2733 ntBASIC2.51□□□□□ -2.01
TRIM43Q96BQ3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM43Q96BQ3 RNU6-418P-201ENST00000384035 107 ntBASIC2.51□□□□□ -2.01
TRIM43Q96BQ3 RNU1-148P-201ENST00000384472 162 ntBASIC2.51□□□□□ -2.01
TRIM43Q96BQ3 RNU6-1235P-201ENST00000384559 107 ntBASIC2.51□□□□□ -2.01
TRIM43Q96BQ3 SNORA80E-201ENST00000384744 137 ntBASIC2.51□□□□□ -2.01
TRIM43Q96BQ3 RNU6-57P-201ENST00000411348 103 ntBASIC2.51□□□□□ -2.01
TRIM43Q96BQ3 CYCSP49-201ENST00000420810 319 ntBASIC2.51□□□□□ -2.01
TRIM43Q96BQ3 AC016717.1-201ENST00000448918 286 ntBASIC2.51□□□□□ -2.01
TRIM43Q96BQ3 RNU6-498P-201ENST00000459468 107 ntBASIC2.51□□□□□ -2.01
TRIM43Q96BQ3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.51□□□□□ -2.01
TRIM43Q96BQ3 MTCO2P24-201ENST00000515611 426 ntBASIC2.51□□□□□ -2.01
TRIM43Q96BQ3 RNU7-110P-201ENST00000516891 62 ntBASIC2.51□□□□□ -2.01
TRIM43Q96BQ3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM43Q96BQ3 AC004467.1-201ENST00000615678 330 ntBASIC2.51□□□□□ -2.01
TRIM43Q96BQ3 AC091932.3-201ENST00000624223 323 ntBASIC2.51□□□□□ -2.01
TRIM43Q96BQ3 MIR219B-201ENST00000637023 88 ntBASIC2.51□□□□□ -2.01
TRIM43Q96BQ3 AC009487.4-201ENST00000624969 3585 ntBASIC2.51□□□□□ -2.01
TRIM43Q96BQ3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.51□□□□□ -2.01
TRIM43Q96BQ3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 Y_RNA.64-201ENST00000362845 102 ntBASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 RNU6-1175P-201ENST00000365200 107 ntBASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 SNORD14D-201ENST00000384390 87 ntBASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 RNU6-21P-201ENST00000384710 107 ntBASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 Y_RNA.570-201ENST00000384750 101 ntBASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 MIR221-201ENST00000385135 110 ntBASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 SNORA26.9-201ENST00000391322 122 ntBASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 MIR1185-2-201ENST00000408687 86 ntBASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 AC139712.2-201ENST00000424302 339 ntBASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 MTCYBP9-201ENST00000431021 303 ntBASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 RPS15AP28-201ENST00000435088 386 ntBASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 AC011753.1-201ENST00000451001 220 ntBASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 LINC01399-202ENST00000458450 244 ntBASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 AC010531.2-201ENST00000465012 153 ntBASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 AP003733.2-201ENST00000529409 171 ntBASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 MIR4423-201ENST00000580922 80 ntBASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 MIR3670-2-201ENST00000582974 65 ntBASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 MIR3670-1-201ENST00000584160 65 ntBASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 MIR3670-3-201ENST00000584855 65 ntBASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 AC006380.1-201ENST00000603598 186 ntBASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 AC067747.1-201ENST00000608026 250 ntBASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 MIR3670-4-201ENST00000612260 65 ntBASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TRIM43Q96BQ3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM43Q96BQ3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM43Q96BQ3 RNU6-1266P-201ENST00000362794 105 ntBASIC2.49□□□□□ -2.01
TRIM43Q96BQ3 RNU1-17P-201ENST00000363022 152 ntBASIC2.49□□□□□ -2.01
TRIM43Q96BQ3 RNU1-52P-201ENST00000384190 164 ntBASIC2.49□□□□□ -2.01
TRIM43Q96BQ3 SNORD115-46-201ENST00000390982 71 ntBASIC2.49□□□□□ -2.01
TRIM43Q96BQ3 AL590004.2-201ENST00000404787 371 ntBASIC2.49□□□□□ -2.01
TRIM43Q96BQ3 RPL23AP36-201ENST00000413895 458 ntBASIC2.49□□□□□ -2.01
TRIM43Q96BQ3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.49□□□□□ -2.01
TRIM43Q96BQ3 AL357134.1-201ENST00000445848 426 ntBASIC2.49□□□□□ -2.01
TRIM43Q96BQ3 AC025465.3-201ENST00000510570 311 ntBASIC2.49□□□□□ -2.01
TRIM43Q96BQ3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.49□□□□□ -2.01
TRIM43Q96BQ3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.49□□□□□ -2.01
TRIM43Q96BQ3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.49□□□□□ -2.01
TRIM43Q96BQ3 U6.104-201ENST00000637979 90 ntBASIC2.49□□□□□ -2.01
TRIM43Q96BQ3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.49□□□□□ -2.01
TRIM43Q96BQ3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM43Q96BQ3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM43Q96BQ3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.48□□□□□ -2.01
TRIM43Q96BQ3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
TRIM43Q96BQ3 Y_RNA.105-201ENST00000363182 111 ntBASIC2.48□□□□□ -2.01
TRIM43Q96BQ3 SNORD113-8-201ENST00000363497 74 ntBASIC2.48□□□□□ -2.01
TRIM43Q96BQ3 RNU6-806P-201ENST00000365147 105 ntBASIC2.48□□□□□ -2.01
TRIM43Q96BQ3 RNU6-160P-201ENST00000384591 107 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms