Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.53□□□□□ -2.16
HMGCLP35914 CYP2C61P-201ENST00000604072 290 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 U1.36-201ENST00000620684 176 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 AC130454.1-201ENST00000622948 401 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 AL078596.1-201ENST00000624856 447 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 snoZ196.1-201ENST00000625269 89 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 Y_RNA.5-201ENST00000362334 102 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 RNU6-1301P-201ENST00000362724 104 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 Y_RNA.67-201ENST00000362870 100 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 RNU6-1305P-201ENST00000364353 104 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 Y_RNA.252-201ENST00000364556 101 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 RNU5E-4P-201ENST00000364931 120 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 Y_RNA.315-201ENST00000365117 102 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 Y_RNA.415-201ENST00000384012 112 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 RNA5SP100-201ENST00000410903 110 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 RNA5SP59-201ENST00000410922 110 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 RNU6-1001P-201ENST00000411265 100 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 MRPS18CP6-201ENST00000423587 223 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 RNU1-98P-201ENST00000458992 160 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 RNU7-57P-201ENST00000459540 60 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 RNU7-4P-201ENST00000516961 62 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 AC025647.1-201ENST00000517879 253 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.52□□□□□ -2.17
HMGCLP35914 MIR5695-201ENST00000579717 85 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 MIR4795-201ENST00000584182 89 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 AL133255.1-201ENST00000606374 441 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 MIR1244-1-201ENST00000612829 85 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 AL357075.2-201ENST00000614906 189 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 Y_RNA.804-201ENST00000615262 101 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 MIR1244-3-201ENST00000635744 85 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 MIR338-201ENST00000636369 67 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 MIR1244-2-201ENST00000636449 85 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 MIR1244-4-202ENST00000636813 85 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
HMGCLP35914 WWP1P1-201ENST00000466609 2769 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 AL159152.1-201ENST00000635019 2587 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
HMGCLP35914 SNORD115-3-201ENST00000363100 82 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 Y_RNA.112-201ENST00000363250 102 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 RNU6-60P-201ENST00000364792 103 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 Y_RNA.358-201ENST00000365491 99 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 SNORD42.2-201ENST00000365570 69 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 Y_RNA.496-201ENST00000384444 101 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 MIR625-201ENST00000385047 85 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 MTND4P28-201ENST00000426217 387 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.51□□□□□ -2.17
HMGCLP35914 AC236972.2-201ENST00000434979 310 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 AC099799.1-201ENST00000439809 192 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 AC016717.1-201ENST00000448918 286 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 Y_RNA.639-201ENST00000458981 102 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 AC011406.1-201ENST00000512440 370 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.51□□□□□ -2.17
HMGCLP35914 SNORA44.1-201ENST00000517031 108 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 RNU6-264P-201ENST00000517134 104 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HMGCLP35914 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HMGCLP35914 RNA5SP361-201ENST00000362686 118 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 Y_RNA.58-201ENST00000362807 102 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 Y_RNA.154-201ENST00000363624 102 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 SNORD87-201ENST00000364849 89 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 RNY3P1-201ENST00000365085 102 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 RNU1-115P-201ENST00000365329 160 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 RNY3-201ENST00000365484 102 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 RNY3P4-201ENST00000384428 101 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 RNU6-296P-201ENST00000384608 107 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 MIR1323-201ENST00000408090 73 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 AC092423.1-201ENST00000430165 186 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 AL445305.1-201ENST00000432577 575 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.5□□□□□ -2.17
HMGCLP35914 AL137792.2-201ENST00000443484 235 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 AC074290.1-201ENST00000448883 135 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 CHEK2P4-201ENST00000450340 246 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.5□□□□□ -2.17
HMGCLP35914 ATP5J2P3-201ENST00000451550 258 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 MIR2053-201ENST00000459295 91 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 RNU6-699P-201ENST00000517081 110 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 AL442163.3-201ENST00000554110 156 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 AC005828.6-201ENST00000606610 232 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 AC104985.2-201ENST00000620598 500 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.5□□□□□ -2.17
HMGCLP35914 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 Y_RNA.197-201ENST00000364004 102 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 Y_RNA.361-201ENST00000365515 120 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 RNU6-1264P-201ENST00000383891 107 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 SNORA69.1-201ENST00000390904 137 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 SNORA67.6-201ENST00000391093 99 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 MIR1304-201ENST00000408243 91 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 RN7SKP51-201ENST00000410781 304 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.49□□□□□ -2.17
HMGCLP35914 CST2P1-201ENST00000425770 87 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 TOMM22P2-201ENST00000430735 237 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 AC245047.4-201ENST00000433189 144 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 HMGN2P34-201ENST00000437647 269 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 190.6 ms