Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 AC073325.2-201ENST00000339545 159 ntBASIC2.98□□□□□ -1.93
NPHS1O60500 MIR367-201ENST00000362299 68 ntBASIC2.98□□□□□ -1.93
NPHS1O60500 RNU1-23P-201ENST00000363361 144 ntBASIC2.98□□□□□ -1.93
NPHS1O60500 Y_RNA.343-201ENST00000365354 112 ntBASIC2.98□□□□□ -1.93
NPHS1O60500 RNU6-1235P-201ENST00000384559 107 ntBASIC2.98□□□□□ -1.93
NPHS1O60500 FO393413.1-201ENST00000402892 195 ntBASIC2.98□□□□□ -1.93
NPHS1O60500 AC016909.1-201ENST00000415916 166 ntBASIC2.98□□□□□ -1.93
NPHS1O60500 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NPHS1O60500 AL162725.1-201ENST00000435405 301 ntBASIC2.98□□□□□ -1.93
NPHS1O60500 AL137159.1-201ENST00000452808 512 ntBASIC2.98□□□□□ -1.93
NPHS1O60500 RNU6-498P-201ENST00000459468 107 ntBASIC2.98□□□□□ -1.93
NPHS1O60500 AC010409.1-201ENST00000487382 476 ntBASIC2.98□□□□□ -1.93
NPHS1O60500 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.98□□□□□ -1.93
NPHS1O60500 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.98□□□□□ -1.93
NPHS1O60500 RNU7-121P-201ENST00000516604 62 ntBASIC2.98□□□□□ -1.93
NPHS1O60500 RNU6-63P-201ENST00000516690 95 ntBASIC2.98□□□□□ -1.93
NPHS1O60500 RNA5SP490-201ENST00000517141 136 ntBASIC2.98□□□□□ -1.93
NPHS1O60500 PRELID2P1-201ENST00000552837 301 ntBASIC2.98□□□□□ -1.93
NPHS1O60500 MIR5739-201ENST00000619803 80 ntBASIC2.98□□□□□ -1.93
NPHS1O60500 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NPHS1O60500 FAM35CP-201ENST00000554755 2470 ntBASIC2.98□□□□□ -1.93
NPHS1O60500 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
NPHS1O60500 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.97□□□□□ -1.93
NPHS1O60500 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
NPHS1O60500 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
NPHS1O60500 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
NPHS1O60500 AL159152.1-201ENST00000635019 2587 ntBASIC2.97□□□□□ -1.93
NPHS1O60500 Y_RNA.568-201ENST00000384742 113 ntBASIC2.97□□□□□ -1.93
NPHS1O60500 AL161788.1-201ENST00000441805 169 ntBASIC2.97□□□□□ -1.93
NPHS1O60500 RPL21P10-201ENST00000463521 490 ntBASIC2.97□□□□□ -1.93
NPHS1O60500 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.97□□□□□ -1.93
NPHS1O60500 RNA5SP272-201ENST00000516095 111 ntBASIC2.97□□□□□ -1.93
NPHS1O60500 RNU6-426P-201ENST00000516464 97 ntBASIC2.97□□□□□ -1.93
NPHS1O60500 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.97□□□□□ -1.93
NPHS1O60500 MIR5688-201ENST00000580619 83 ntBASIC2.97□□□□□ -1.93
NPHS1O60500 MIR4506-201ENST00000584693 77 ntBASIC2.97□□□□□ -1.93
NPHS1O60500 AP003357.1-201ENST00000604497 148 ntBASIC2.97□□□□□ -1.93
NPHS1O60500 AC090115.4-201ENST00000609970 188 ntBASIC2.97□□□□□ -1.93
NPHS1O60500 AL391903.3-201ENST00000612158 163 ntBASIC2.97□□□□□ -1.93
NPHS1O60500 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.97□□□□□ -1.93
NPHS1O60500 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NPHS1O60500 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
NPHS1O60500 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.96□□□□□ -1.93
NPHS1O60500 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.96□□□□□ -1.94
NPHS1O60500 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NPHS1O60500 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
NPHS1O60500 MIR23B-201ENST00000384832 97 ntBASIC2.96□□□□□ -1.94
NPHS1O60500 AL606845.1-201ENST00000404881 255 ntBASIC2.96□□□□□ -1.94
NPHS1O60500 RN7SKP220-201ENST00000410611 288 ntBASIC2.96□□□□□ -1.94
NPHS1O60500 AL513477.1-202ENST00000417061 214 ntBASIC2.96□□□□□ -1.94
NPHS1O60500 AL121914.1-201ENST00000450188 156 ntBASIC2.96□□□□□ -1.94
NPHS1O60500 SNORA84-201ENST00000459229 133 ntBASIC2.96□□□□□ -1.94
NPHS1O60500 RN7SL863P-201ENST00000462370 296 ntBASIC2.96□□□□□ -1.94
NPHS1O60500 AC010531.2-201ENST00000465012 153 ntBASIC2.96□□□□□ -1.94
NPHS1O60500 RN7SL293P-201ENST00000481765 281 ntBASIC2.96□□□□□ -1.94
NPHS1O60500 AC023141.11-201ENST00000508864 202 ntBASIC2.96□□□□□ -1.94
NPHS1O60500 RNU6-561P-201ENST00000516222 102 ntBASIC2.96□□□□□ -1.94
NPHS1O60500 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.96□□□□□ -1.94
NPHS1O60500 POLR3GP1-201ENST00000594073 261 ntBASIC2.96□□□□□ -1.94
NPHS1O60500 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.96□□□□□ -1.94
NPHS1O60500 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
NPHS1O60500 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NPHS1O60500 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
NPHS1O60500 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.96□□□□□ -1.94
NPHS1O60500 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
NPHS1O60500 AC138915.1-201ENST00000565427 1685 ntBASIC2.95□□□□□ -1.94
NPHS1O60500 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
NPHS1O60500 RNU6-1323P-201ENST00000384025 107 ntBASIC2.95□□□□□ -1.94
NPHS1O60500 MIR569-201ENST00000385228 96 ntBASIC2.95□□□□□ -1.94
NPHS1O60500 SNORD67-201ENST00000390833 111 ntBASIC2.95□□□□□ -1.94
NPHS1O60500 SNORA48.7-201ENST00000391302 135 ntBASIC2.95□□□□□ -1.94
NPHS1O60500 CKS1BP2-201ENST00000497342 240 ntBASIC2.95□□□□□ -1.94
NPHS1O60500 AC107027.2-201ENST00000512197 115 ntBASIC2.95□□□□□ -1.94
NPHS1O60500 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.95□□□□□ -1.94
NPHS1O60500 AC127455.1-201ENST00000565496 145 ntBASIC2.95□□□□□ -1.94
NPHS1O60500 AC005972.2-201ENST00000604690 348 ntBASIC2.95□□□□□ -1.94
NPHS1O60500 AC007318.2-201ENST00000620999 243 ntBASIC2.95□□□□□ -1.94
NPHS1O60500 MIR3658-201ENST00000636291 56 ntBASIC2.95□□□□□ -1.94
NPHS1O60500 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
NPHS1O60500 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
NPHS1O60500 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NPHS1O60500 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.94□□□□□ -1.94
NPHS1O60500 RNU6-1240P-201ENST00000365155 104 ntBASIC2.94□□□□□ -1.94
NPHS1O60500 MIR95-201ENST00000385072 81 ntBASIC2.94□□□□□ -1.94
NPHS1O60500 RNA5SP511-201ENST00000410487 115 ntBASIC2.94□□□□□ -1.94
NPHS1O60500 RNU4-47P-201ENST00000410876 114 ntBASIC2.94□□□□□ -1.94
NPHS1O60500 AC006461.1-201ENST00000412637 326 ntBASIC2.94□□□□□ -1.94
NPHS1O60500 AL135786.1-201ENST00000415892 214 ntBASIC2.94□□□□□ -1.94
NPHS1O60500 AC008134.1-201ENST00000420943 193 ntBASIC2.94□□□□□ -1.94
NPHS1O60500 Z96811.1-201ENST00000445880 108 ntBASIC2.94□□□□□ -1.94
NPHS1O60500 AC080013.2-201ENST00000460866 323 ntBASIC2.94□□□□□ -1.94
NPHS1O60500 RPL36AP21-201ENST00000490372 323 ntBASIC2.94□□□□□ -1.94
NPHS1O60500 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.94□□□□□ -1.94
NPHS1O60500 RNA5SP385-201ENST00000515947 110 ntBASIC2.94□□□□□ -1.94
NPHS1O60500 AC019176.2-201ENST00000611579 315 ntBASIC2.94□□□□□ -1.94
NPHS1O60500 AC012640.5-201ENST00000623897 319 ntBASIC2.94□□□□□ -1.94
NPHS1O60500 AC091895.1-201ENST00000624494 256 ntBASIC2.94□□□□□ -1.94
NPHS1O60500 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.94□□□□□ -1.94
NPHS1O60500 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.94□□□□□ -1.94
NPHS1O60500 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms