Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-1.48□□□□□ -2.65
NRXN3Q9Y4C0 RNA5SP261-201ENST00000410536 106 ntBASIC-1.48□□□□□ -2.65
NRXN3Q9Y4C0 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-1.48□□□□□ -2.65
NRXN3Q9Y4C0 MTATP6P30-201ENST00000443540 664 ntBASIC-1.48□□□□□ -2.65
NRXN3Q9Y4C0 AC091959.1-201ENST00000495857 238 ntBASIC-1.48□□□□□ -2.65
NRXN3Q9Y4C0 SNORA18.7-201ENST00000516910 131 ntBASIC-1.48□□□□□ -2.65
NRXN3Q9Y4C0 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.48□□□□□ -2.65
NRXN3Q9Y4C0 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC-1.48□□□□□ -2.65
NRXN3Q9Y4C0 AC078795.2-201ENST00000602835 1252 ntBASIC-1.48□□□□□ -2.65
NRXN3Q9Y4C0 AC006380.1-201ENST00000603598 186 ntBASIC-1.48□□□□□ -2.65
NRXN3Q9Y4C0 AL158211.4-201ENST00000606988 584 ntBASIC-1.48□□□□□ -2.65
NRXN3Q9Y4C0 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.48□□□□□ -2.65
NRXN3Q9Y4C0 MTND1P33-201ENST00000446251 917 ntBASIC-1.48□□□□□ -2.65
NRXN3Q9Y4C0 AC093850.1-201ENST00000454121 251 ntBASIC-1.48□□□□□ -2.65
NRXN3Q9Y4C0 AC105417.1-201ENST00000514691 285 ntBASIC-1.48□□□□□ -2.65
NRXN3Q9Y4C0 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.48□□□□□ -2.65
NRXN3Q9Y4C0 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.48□□□□□ -2.65
NRXN3Q9Y4C0 AC011458.1-201ENST00000604034 617 ntBASIC-1.48□□□□□ -2.65
NRXN3Q9Y4C0 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.49□□□□□ -2.65
NRXN3Q9Y4C0 RNU6-119P-201ENST00000364882 107 ntBASIC-1.49□□□□□ -2.65
NRXN3Q9Y4C0 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-1.49□□□□□ -2.65
NRXN3Q9Y4C0 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.49□□□□□ -2.65
NRXN3Q9Y4C0 AP002802.2-201ENST00000605877 235 ntBASIC-1.49□□□□□ -2.65
NRXN3Q9Y4C0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-1.49□□□□□ -2.65
NRXN3Q9Y4C0 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.5□□□□□ -2.65
NRXN3Q9Y4C0 TMSB4XP8-201ENST00000402089 135 ntBASIC-1.5□□□□□ -2.65
NRXN3Q9Y4C0 ELOCP21-201ENST00000412558 336 ntBASIC-1.5□□□□□ -2.65
NRXN3Q9Y4C0 MTND4P15-201ENST00000437913 1033 ntBASIC-1.5□□□□□ -2.65
NRXN3Q9Y4C0 SUMO1P1-201ENST00000497904 306 ntBASIC-1.5□□□□□ -2.65
NRXN3Q9Y4C0 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-1.5□□□□□ -2.65
NRXN3Q9Y4C0 AC134698.4-201ENST00000523451 826 ntBASIC-1.5□□□□□ -2.65
NRXN3Q9Y4C0 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-1.5□□□□□ -2.65
NRXN3Q9Y4C0 RPL31P54-201ENST00000429803 370 ntBASIC-1.51□□□□□ -2.65
NRXN3Q9Y4C0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-1.51□□□□□ -2.65
NRXN3Q9Y4C0 AC099786.3-201ENST00000565735 1410 ntBASIC-1.51□□□□□ -2.65
NRXN3Q9Y4C0 MTND4P21-201ENST00000453886 1357 ntBASIC-1.51□□□□□ -2.65
NRXN3Q9Y4C0 RNU6-1167P-201ENST00000363227 94 ntBASIC-1.51□□□□□ -2.65
NRXN3Q9Y4C0 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.51□□□□□ -2.65
NRXN3Q9Y4C0 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.51□□□□□ -2.65
NRXN3Q9Y4C0 MIR501-201ENST00000390204 84 ntBASIC-1.51□□□□□ -2.65
NRXN3Q9Y4C0 RNY4P36-201ENST00000391116 96 ntBASIC-1.51□□□□□ -2.65
NRXN3Q9Y4C0 RNU6-721P-201ENST00000410155 105 ntBASIC-1.51□□□□□ -2.65
NRXN3Q9Y4C0 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-1.51□□□□□ -2.65
NRXN3Q9Y4C0 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.51□□□□□ -2.65
NRXN3Q9Y4C0 AC097462.1-201ENST00000514125 324 ntBASIC-1.51□□□□□ -2.65
NRXN3Q9Y4C0 MIR4804-201ENST00000581683 73 ntBASIC-1.51□□□□□ -2.65
NRXN3Q9Y4C0 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-1.51□□□□□ -2.65
NRXN3Q9Y4C0 AC005332.6-201ENST00000613178 446 ntBASIC-1.51□□□□□ -2.65
NRXN3Q9Y4C0 FRG1KP-201ENST00000623592 341 ntBASIC-1.51□□□□□ -2.65
NRXN3Q9Y4C0 AC112204.3-201ENST00000623822 332 ntBASIC-1.51□□□□□ -2.65
NRXN3Q9Y4C0 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.52□□□□□ -2.65
NRXN3Q9Y4C0 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.52□□□□□ -2.65
NRXN3Q9Y4C0 SNORD64-201ENST00000386683 67 ntBASIC-1.52□□□□□ -2.65
NRXN3Q9Y4C0 RNU6-370P-201ENST00000411008 104 ntBASIC-1.52□□□□□ -2.65
NRXN3Q9Y4C0 AL592310.1-201ENST00000414330 671 ntBASIC-1.52□□□□□ -2.65
NRXN3Q9Y4C0 AL117339.3-201ENST00000418733 162 ntBASIC-1.52□□□□□ -2.65
NRXN3Q9Y4C0 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC-1.52□□□□□ -2.65
NRXN3Q9Y4C0 MTCO2P7-201ENST00000446518 666 ntBASIC-1.52□□□□□ -2.65
NRXN3Q9Y4C0 AL360271.2-201ENST00000447710 161 ntBASIC-1.52□□□□□ -2.65
NRXN3Q9Y4C0 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-1.52□□□□□ -2.65
NRXN3Q9Y4C0 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-1.52□□□□□ -2.65
NRXN3Q9Y4C0 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.53□□□□□ -2.65
NRXN3Q9Y4C0 RNU6-226P-201ENST00000363778 107 ntBASIC-1.53□□□□□ -2.65
NRXN3Q9Y4C0 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.53□□□□□ -2.65
NRXN3Q9Y4C0 SNORA2B-201ENST00000384583 137 ntBASIC-1.53□□□□□ -2.65
NRXN3Q9Y4C0 SNORA75.1-201ENST00000391130 148 ntBASIC-1.53□□□□□ -2.65
NRXN3Q9Y4C0 MIR18B-201ENST00000454574 71 ntBASIC-1.53□□□□□ -2.65
NRXN3Q9Y4C0 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-1.53□□□□□ -2.65
NRXN3Q9Y4C0 AC078795.3-201ENST00000602913 472 ntBASIC-1.53□□□□□ -2.65
NRXN3Q9Y4C0 AL390123.1-201ENST00000603216 237 ntBASIC-1.53□□□□□ -2.65
NRXN3Q9Y4C0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-1.53□□□□□ -2.65
NRXN3Q9Y4C0 RNU6-622P-201ENST00000384272 103 ntBASIC-1.54□□□□□ -2.66
NRXN3Q9Y4C0 RNA5SP390-201ENST00000410191 113 ntBASIC-1.54□□□□□ -2.66
NRXN3Q9Y4C0 USP9YP16-201ENST00000430287 407 ntBASIC-1.54□□□□□ -2.66
NRXN3Q9Y4C0 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.54□□□□□ -2.66
NRXN3Q9Y4C0 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-1.54□□□□□ -2.66
NRXN3Q9Y4C0 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-1.54□□□□□ -2.66
NRXN3Q9Y4C0 LRRC6P1-201ENST00000532188 885 ntBASIC-1.54□□□□□ -2.66
NRXN3Q9Y4C0 MIR7107-201ENST00000611489 80 ntBASIC-1.54□□□□□ -2.66
NRXN3Q9Y4C0 MIR6129-201ENST00000616087 109 ntBASIC-1.54□□□□□ -2.66
NRXN3Q9Y4C0 MIR382-201ENST00000637119 76 ntBASIC-1.54□□□□□ -2.66
NRXN3Q9Y4C0 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.55□□□□□ -2.66
NRXN3Q9Y4C0 RNU6-843P-201ENST00000384454 104 ntBASIC-1.55□□□□□ -2.66
NRXN3Q9Y4C0 MIR660-201ENST00000385235 97 ntBASIC-1.55□□□□□ -2.66
NRXN3Q9Y4C0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-1.55□□□□□ -2.66
NRXN3Q9Y4C0 TRIM60P10Y-201ENST00000425589 751 ntBASIC-1.55□□□□□ -2.66
NRXN3Q9Y4C0 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-1.55□□□□□ -2.66
NRXN3Q9Y4C0 FCF1P4-201ENST00000448326 183 ntBASIC-1.55□□□□□ -2.66
NRXN3Q9Y4C0 AC109446.1-201ENST00000566172 220 ntBASIC-1.55□□□□□ -2.66
NRXN3Q9Y4C0 AC090897.1-201ENST00000580909 226 ntBASIC-1.55□□□□□ -2.66
NRXN3Q9Y4C0 AL162424.1-201ENST00000602325 221 ntBASIC-1.55□□□□□ -2.66
NRXN3Q9Y4C0 AC122133.1-201ENST00000613964 233 ntBASIC-1.55□□□□□ -2.66
NRXN3Q9Y4C0 AL450472.1-202ENST00000637286 180 ntBASIC-1.55□□□□□ -2.66
NRXN3Q9Y4C0 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-1.55□□□□□ -2.66
NRXN3Q9Y4C0 Y_RNA.311-201ENST00000365068 96 ntBASIC-1.55□□□□□ -2.66
NRXN3Q9Y4C0 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.55□□□□□ -2.66
NRXN3Q9Y4C0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-1.55□□□□□ -2.66
NRXN3Q9Y4C0 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-1.55□□□□□ -2.66
NRXN3Q9Y4C0 SNORA13-201ENST00000458790 133 ntBASIC-1.55□□□□□ -2.66
NRXN3Q9Y4C0 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.55□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 200.8 ms