Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 SCARNA17.4-201ENST00000614296 143 ntBASIC2.56□□□□□ -2
ZNF48Q96MX3 snoU18.1-201ENST00000629629 71 ntBASIC2.56□□□□□ -2
ZNF48Q96MX3 AL137790.1-201ENST00000634283 177 ntBASIC2.56□□□□□ -2
ZNF48Q96MX3 MIR3529-201ENST00000637713 78 ntBASIC2.56□□□□□ -2
ZNF48Q96MX3 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.56□□□□□ -2
ZNF48Q96MX3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.56□□□□□ -2
ZNF48Q96MX3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ZNF48Q96MX3 Y_RNA.179-201ENST00000363844 90 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 RNU6-461P-201ENST00000364195 107 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 SNORA68.1-201ENST00000364537 132 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 Y_RNA.272-201ENST00000364696 102 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 RNU6-487P-201ENST00000365430 104 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 RNU6-1130P-201ENST00000365434 107 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
ZNF48Q96MX3 Y_RNA.580-201ENST00000391004 95 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 RNA5SP390-201ENST00000410191 113 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 RNU6-1199P-201ENST00000411249 104 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 ELOCP21-201ENST00000412558 336 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.55□□□□□ -2
ZNF48Q96MX3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ZNF48Q96MX3 IFNA11P-201ENST00000446352 526 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 RBBP8P1-201ENST00000449447 1844 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 AC007215.1-201ENST00000464893 276 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 RPL30P12-201ENST00000474666 353 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 AC091179.3-201ENST00000474761 144 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 AL121594.1-201ENST00000475906 575 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.55□□□□□ -2
ZNF48Q96MX3 RPL23AP94-201ENST00000512518 302 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 RNU1-143P-201ENST00000516296 146 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 SNORA31.16-201ENST00000516773 139 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.55□□□□□ -2
ZNF48Q96MX3 AC021739.1-201ENST00000559631 174 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.55□□□□□ -2
ZNF48Q96MX3 AL008718.3-201ENST00000610217 321 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 U1.23-201ENST00000610293 146 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 uc_338.25-201ENST00000613756 156 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 RNU1-68P-201ENST00000615382 146 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 U1.39-201ENST00000621562 146 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 AC091932.3-201ENST00000624223 323 ntBASIC2.55□□□□□ -2
ZNF48Q96MX3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.55□□□□□ -2
ZNF48Q96MX3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
ZNF48Q96MX3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
ZNF48Q96MX3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
ZNF48Q96MX3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ZNF48Q96MX3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
ZNF48Q96MX3 RNU6-1272P-201ENST00000362776 107 ntBASIC2.54□□□□□ -2
ZNF48Q96MX3 SNORD116-18-201ENST00000383961 92 ntBASIC2.54□□□□□ -2
ZNF48Q96MX3 SNORA54-201ENST00000384281 123 ntBASIC2.54□□□□□ -2
ZNF48Q96MX3 Y_RNA.500-201ENST00000384466 111 ntBASIC2.54□□□□□ -2
ZNF48Q96MX3 RNU6-1117P-201ENST00000384525 104 ntBASIC2.54□□□□□ -2
ZNF48Q96MX3 Y_RNA.571-201ENST00000384753 98 ntBASIC2.54□□□□□ -2
ZNF48Q96MX3 MIR549A-201ENST00000385268 96 ntBASIC2.54□□□□□ -2
ZNF48Q96MX3 AC019205.3-201ENST00000424573 156 ntBASIC2.54□□□□□ -2
ZNF48Q96MX3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.54□□□□□ -2
ZNF48Q96MX3 HMGB3P3-201ENST00000510526 400 ntBASIC2.54□□□□□ -2
ZNF48Q96MX3 ACA59.2-201ENST00000517061 156 ntBASIC2.54□□□□□ -2
ZNF48Q96MX3 SUMO2P18-201ENST00000518873 252 ntBASIC2.54□□□□□ -2
ZNF48Q96MX3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.54□□□□□ -2
ZNF48Q96MX3 AP002001.1-203ENST00000534002 267 ntBASIC2.54□□□□□ -2
ZNF48Q96MX3 AC006199.1-201ENST00000548728 219 ntBASIC2.54□□□□□ -2
ZNF48Q96MX3 NACAP3-201ENST00000552100 481 ntBASIC2.54□□□□□ -2
ZNF48Q96MX3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.54□□□□□ -2
ZNF48Q96MX3 MIR3117-201ENST00000584034 78 ntBASIC2.54□□□□□ -2
ZNF48Q96MX3 MIR4298-201ENST00000584380 73 ntBASIC2.54□□□□□ -2
ZNF48Q96MX3 RPL12P50-201ENST00000603116 116 ntBASIC2.54□□□□□ -2
ZNF48Q96MX3 AC093732.2-201ENST00000607950 274 ntBASIC2.54□□□□□ -2
ZNF48Q96MX3 AC004467.1-201ENST00000615678 330 ntBASIC2.54□□□□□ -2
ZNF48Q96MX3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.54□□□□□ -2
ZNF48Q96MX3 MTND1P7-201ENST00000632801 297 ntBASIC2.54□□□□□ -2
ZNF48Q96MX3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
ZNF48Q96MX3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.54□□□□□ -2
ZNF48Q96MX3 AL355596.1-201ENST00000565399 3996 ntBASIC2.54□□□□□ -2
ZNF48Q96MX3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
ZNF48Q96MX3 AC092593.1-201ENST00000515413 1815 ntBASIC2.54□□□□□ -2
ZNF48Q96MX3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.53□□□□□ -2
ZNF48Q96MX3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.53□□□□□ -2
ZNF48Q96MX3 RNU6-245P-201ENST00000384020 107 ntBASIC2.53□□□□□ -2
ZNF48Q96MX3 RNU6-793P-201ENST00000384233 104 ntBASIC2.53□□□□□ -2
ZNF48Q96MX3 Y_RNA.498-201ENST00000384460 102 ntBASIC2.53□□□□□ -2
ZNF48Q96MX3 RNU6-750P-201ENST00000390946 107 ntBASIC2.53□□□□□ -2
ZNF48Q96MX3 AL512633.1-201ENST00000399931 655 ntBASIC2.53□□□□□ -2
ZNF48Q96MX3 AC107083.1-201ENST00000439643 279 ntBASIC2.53□□□□□ -2
ZNF48Q96MX3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.53□□□□□ -2
ZNF48Q96MX3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.53□□□□□ -2
ZNF48Q96MX3 AC090525.1-201ENST00000479116 478 ntBASIC2.53□□□□□ -2
ZNF48Q96MX3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.53□□□□□ -2
ZNF48Q96MX3 RNU5F-8P-201ENST00000515941 111 ntBASIC2.53□□□□□ -2
ZNF48Q96MX3 RNU6-155P-201ENST00000516347 100 ntBASIC2.53□□□□□ -2
ZNF48Q96MX3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.53□□□□□ -2
ZNF48Q96MX3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.53□□□□□ -2
ZNF48Q96MX3 DEFB117-201ENST00000602356 141 ntBASIC2.53□□□□□ -2
ZNF48Q96MX3 AL356575.1-201ENST00000603008 283 ntBASIC2.53□□□□□ -2
ZNF48Q96MX3 MIR7106-201ENST00000612419 65 ntBASIC2.53□□□□□ -2
ZNF48Q96MX3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.53□□□□□ -2
ZNF48Q96MX3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.53□□□□□ -2
ZNF48Q96MX3 MIR3199-2-201ENST00000636243 86 ntBASIC2.53□□□□□ -2
ZNF48Q96MX3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.53□□□□□ -2
ZNF48Q96MX3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.53□□□□□ -2
ZNF48Q96MX3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
ZNF48Q96MX3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 237 ms