Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 RNU6-1131P-201ENST00000364955 107 ntBASIC3.69□□□□□ -1.82
GRIK1P39086 Y_RNA.348-201ENST00000365403 103 ntBASIC3.69□□□□□ -1.82
GRIK1P39086 SNORA18.3-201ENST00000384122 132 ntBASIC3.69□□□□□ -1.82
GRIK1P39086 SNORA9-201ENST00000384215 133 ntBASIC3.69□□□□□ -1.82
GRIK1P39086 RNU6-106P-201ENST00000384405 107 ntBASIC3.69□□□□□ -1.82
GRIK1P39086 SNORA48.5-201ENST00000391143 135 ntBASIC3.69□□□□□ -1.82
GRIK1P39086 RNA5SP504-201ENST00000410676 117 ntBASIC3.69□□□□□ -1.82
GRIK1P39086 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.69□□□□□ -1.82
GRIK1P39086 AC125238.1-201ENST00000448842 249 ntBASIC3.69□□□□□ -1.82
GRIK1P39086 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.69□□□□□ -1.82
GRIK1P39086 RNU6-581P-201ENST00000516214 105 ntBASIC3.69□□□□□ -1.82
GRIK1P39086 Y_RNA.692-201ENST00000516627 105 ntBASIC3.69□□□□□ -1.82
GRIK1P39086 SNORA70.24-201ENST00000517233 118 ntBASIC3.69□□□□□ -1.82
GRIK1P39086 RNU2-60P-201ENST00000517290 128 ntBASIC3.69□□□□□ -1.82
GRIK1P39086 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.69□□□□□ -1.82
GRIK1P39086 AC021739.1-201ENST00000559631 174 ntBASIC3.69□□□□□ -1.82
GRIK1P39086 AC011471.1-201ENST00000585766 187 ntBASIC3.69□□□□□ -1.82
GRIK1P39086 AC099778.2-201ENST00000610904 211 ntBASIC3.69□□□□□ -1.82
GRIK1P39086 AL121890.5-201ENST00000620848 304 ntBASIC3.69□□□□□ -1.82
GRIK1P39086 MIR3199-2-201ENST00000636243 86 ntBASIC3.69□□□□□ -1.82
GRIK1P39086 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
GRIK1P39086 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
GRIK1P39086 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.69□□□□□ -1.82
GRIK1P39086 AC138915.1-201ENST00000565427 1685 ntBASIC3.68□□□□□ -1.82
GRIK1P39086 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
GRIK1P39086 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.68□□□□□ -1.82
GRIK1P39086 ADAM3A-203ENST00000461344 2157 ntBASIC3.68□□□□□ -1.82
GRIK1P39086 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
GRIK1P39086 MIR367-201ENST00000362299 68 ntBASIC3.68□□□□□ -1.82
GRIK1P39086 RNU6-597P-201ENST00000365620 102 ntBASIC3.68□□□□□ -1.82
GRIK1P39086 MIR491-201ENST00000384877 84 ntBASIC3.68□□□□□ -1.82
GRIK1P39086 SNORD17-201ENST00000390930 237 ntBASIC3.68□□□□□ -1.82
GRIK1P39086 MIR208B-201ENST00000401172 77 ntBASIC3.68□□□□□ -1.82
GRIK1P39086 RNU6-554P-201ENST00000410466 106 ntBASIC3.68□□□□□ -1.82
GRIK1P39086 RNU4-43P-201ENST00000410628 137 ntBASIC3.68□□□□□ -1.82
GRIK1P39086 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.68□□□□□ -1.82
GRIK1P39086 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.68□□□□□ -1.82
GRIK1P39086 SNRPGP8-201ENST00000454064 226 ntBASIC3.68□□□□□ -1.82
GRIK1P39086 RPS4XP2-201ENST00000458402 793 ntBASIC3.68□□□□□ -1.82
GRIK1P39086 RN7SL594P-201ENST00000470590 287 ntBASIC3.68□□□□□ -1.82
GRIK1P39086 RNU6-711P-201ENST00000517255 106 ntBASIC3.68□□□□□ -1.82
GRIK1P39086 HMGN2P15-201ENST00000585707 270 ntBASIC3.68□□□□□ -1.82
GRIK1P39086 RNVU1-4-201ENST00000612985 164 ntBASIC3.68□□□□□ -1.82
GRIK1P39086 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.68□□□□□ -1.82
GRIK1P39086 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
GRIK1P39086 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.68□□□□□ -1.82
GRIK1P39086 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
GRIK1P39086 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
GRIK1P39086 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
GRIK1P39086 SNORD114-19-201ENST00000363072 75 ntBASIC3.67□□□□□ -1.82
GRIK1P39086 Y_RNA.243-201ENST00000364481 109 ntBASIC3.67□□□□□ -1.82
GRIK1P39086 MIR1278-201ENST00000408753 81 ntBASIC3.67□□□□□ -1.82
GRIK1P39086 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.67□□□□□ -1.82
GRIK1P39086 AC245291.1-201ENST00000419501 328 ntBASIC3.67□□□□□ -1.82
GRIK1P39086 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.67□□□□□ -1.82
GRIK1P39086 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.67□□□□□ -1.82
GRIK1P39086 RPL30P11-203ENST00000598995 310 ntBASIC3.67□□□□□ -1.82
GRIK1P39086 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.67□□□□□ -1.82
GRIK1P39086 AC106754.2-201ENST00000623006 233 ntBASIC3.67□□□□□ -1.82
GRIK1P39086 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
GRIK1P39086 AC073346.2-201ENST00000624724 2058 ntBASIC3.67□□□□□ -1.82
GRIK1P39086 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.67□□□□□ -1.82
GRIK1P39086 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
GRIK1P39086 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
GRIK1P39086 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
GRIK1P39086 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
GRIK1P39086 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.66□□□□□ -1.82
GRIK1P39086 RNU6-1280P-201ENST00000365211 107 ntBASIC3.66□□□□□ -1.82
GRIK1P39086 Y_RNA.456-201ENST00000384232 111 ntBASIC3.66□□□□□ -1.82
GRIK1P39086 RNU6-880P-201ENST00000384526 107 ntBASIC3.66□□□□□ -1.82
GRIK1P39086 RNA5SP252-201ENST00000391131 119 ntBASIC3.66□□□□□ -1.82
GRIK1P39086 U3.26-201ENST00000391236 204 ntBASIC3.66□□□□□ -1.82
GRIK1P39086 Y_RNA.617-201ENST00000410920 90 ntBASIC3.66□□□□□ -1.82
GRIK1P39086 ARF4P2-201ENST00000430209 526 ntBASIC3.66□□□□□ -1.82
GRIK1P39086 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.66□□□□□ -1.82
GRIK1P39086 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.66□□□□□ -1.82
GRIK1P39086 RPS26P45-201ENST00000471748 340 ntBASIC3.66□□□□□ -1.82
GRIK1P39086 AC117454.1-201ENST00000491120 168 ntBASIC3.66□□□□□ -1.82
GRIK1P39086 AC093331.1-201ENST00000521474 169 ntBASIC3.66□□□□□ -1.82
GRIK1P39086 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.66□□□□□ -1.82
GRIK1P39086 MIR3200-201ENST00000580767 85 ntBASIC3.66□□□□□ -1.82
GRIK1P39086 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.66□□□□□ -1.82
GRIK1P39086 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.66□□□□□ -1.82
GRIK1P39086 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
GRIK1P39086 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
GRIK1P39086 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.66□□□□□ -1.82
GRIK1P39086 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
GRIK1P39086 AL049781.1-201ENST00000623195 3585 ntBASIC3.66□□□□□ -1.82
GRIK1P39086 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
GRIK1P39086 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
GRIK1P39086 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
GRIK1P39086 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
GRIK1P39086 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.83
GRIK1P39086 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.65□□□□□ -1.83
GRIK1P39086 RNU6-1275P-201ENST00000391087 107 ntBASIC3.65□□□□□ -1.83
GRIK1P39086 RNU1-101P-201ENST00000391171 127 ntBASIC3.65□□□□□ -1.83
GRIK1P39086 AC005300.1-201ENST00000428401 373 ntBASIC3.65□□□□□ -1.83
GRIK1P39086 Y_RNA.649-201ENST00000459077 103 ntBASIC3.65□□□□□ -1.83
GRIK1P39086 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.65□□□□□ -1.83
GRIK1P39086 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms