Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.11□□□□□ -2.23
SCN4AP35499 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.11□□□□□ -2.23
SCN4AP35499 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.11□□□□□ -2.23
SCN4AP35499 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.11□□□□□ -2.23
SCN4AP35499 RNU7-14P-201ENST00000459331 62 ntBASIC1.11□□□□□ -2.23
SCN4AP35499 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.11□□□□□ -2.23
SCN4AP35499 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.11□□□□□ -2.23
SCN4AP35499 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.11□□□□□ -2.23
SCN4AP35499 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.11□□□□□ -2.23
SCN4AP35499 AC005034.5-201ENST00000604219 466 ntBASIC1.11□□□□□ -2.23
SCN4AP35499 Z98751.3-201ENST00000604447 521 ntBASIC1.11□□□□□ -2.23
SCN4AP35499 MIR8074-201ENST00000615081 81 ntBASIC1.11□□□□□ -2.23
SCN4AP35499 AC048344.4-201ENST00000619744 527 ntBASIC1.11□□□□□ -2.23
SCN4AP35499 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.11□□□□□ -2.23
SCN4AP35499 Y_RNA.115-201ENST00000363272 98 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 Y_RNA.504-201ENST00000384481 104 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 RNU6-510P-201ENST00000391239 108 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 MIR1283-1-201ENST00000408494 87 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.1□□□□□ -2.23
SCN4AP35499 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.1□□□□□ -2.23
SCN4AP35499 PCMTD1P1-201ENST00000455560 355 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.1□□□□□ -2.23
SCN4AP35499 Y_RNA.681-201ENST00000516445 113 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 MIR4698-201ENST00000577795 80 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.1□□□□□ -2.23
SCN4AP35499 AC068790.6-201ENST00000602558 258 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 AL078604.3-201ENST00000615580 211 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 AC015540.1-201ENST00000615828 501 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 MIR924-201ENST00000638017 53 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 RNU6-137P-201ENST00000363680 108 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 SNORD115-8-201ENST00000363856 82 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 Y_RNA.231-201ENST00000364358 102 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 SNORD31B-201ENST00000364977 69 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 SNORD115-38-201ENST00000365037 82 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 RNU6-128P-201ENST00000383976 107 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 RNU6-17P-201ENST00000384245 107 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 RNU6-18P-201ENST00000384527 107 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 RNU6-1274P-201ENST00000384557 107 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 AC060773.1-201ENST00000421698 310 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 AC007215.1-201ENST00000464893 276 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.1□□□□□ -2.23
SCN4AP35499 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.1□□□□□ -2.23
SCN4AP35499 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.1□□□□□ -2.23
SCN4AP35499 AL512605.2-201ENST00000592972 256 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 7SK.7-201ENST00000603504 247 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 AC092954.2-201ENST00000609103 430 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 FER-210ENST00000628534 558 ntTSL 5 BASIC1.1□□□□□ -2.23
SCN4AP35499 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.1□□□□□ -2.23
SCN4AP35499 MIR3662-201ENST00000637030 95 ntBASIC1.1□□□□□ -2.23
SCN4AP35499 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
SCN4AP35499 RNU6-1303P-201ENST00000364841 107 ntBASIC1.09□□□□□ -2.23
SCN4AP35499 Y_RNA.453-201ENST00000384223 109 ntBASIC1.09□□□□□ -2.23
SCN4AP35499 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
SCN4AP35499 ZNF885P-201ENST00000420174 1098 ntBASIC1.09□□□□□ -2.23
SCN4AP35499 AC123900.1-201ENST00000420390 96 ntBASIC1.09□□□□□ -2.23
SCN4AP35499 AL590135.1-201ENST00000422215 156 ntBASIC1.09□□□□□ -2.23
SCN4AP35499 AC019205.3-201ENST00000424573 156 ntBASIC1.09□□□□□ -2.23
SCN4AP35499 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.09□□□□□ -2.23
SCN4AP35499 AC016700.2-201ENST00000446011 156 ntBASIC1.09□□□□□ -2.23
SCN4AP35499 AC016925.1-201ENST00000458303 298 ntBASIC1.09□□□□□ -2.23
SCN4AP35499 AF186996.7-201ENST00000492781 209 ntBASIC1.09□□□□□ -2.23
SCN4AP35499 AC015911.1-201ENST00000495111 156 ntBASIC1.09□□□□□ -2.23
SCN4AP35499 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.09□□□□□ -2.23
SCN4AP35499 AC105313.1-201ENST00000509121 353 ntBASIC1.09□□□□□ -2.23
SCN4AP35499 FAM206BP-201ENST00000510179 541 ntBASIC1.09□□□□□ -2.23
SCN4AP35499 DEFB108E-201ENST00000524692 240 ntBASIC1.09□□□□□ -2.23
SCN4AP35499 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.09□□□□□ -2.23
SCN4AP35499 RMST_3.1-201ENST00000611651 109 ntBASIC1.09□□□□□ -2.23
SCN4AP35499 AC009248.2-201ENST00000619826 254 ntBASIC1.09□□□□□ -2.23
SCN4AP35499 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.09□□□□□ -2.23
SCN4AP35499 CBX3P1-201ENST00000325243 554 ntBASIC1.08□□□□□ -2.24
SCN4AP35499 RNA5SP62-201ENST00000363457 110 ntBASIC1.08□□□□□ -2.24
SCN4AP35499 U3.9-201ENST00000363823 204 ntBASIC1.08□□□□□ -2.24
SCN4AP35499 RNU6-780P-201ENST00000391030 104 ntBASIC1.08□□□□□ -2.24
SCN4AP35499 RNA5SP467-201ENST00000391274 118 ntBASIC1.08□□□□□ -2.24
SCN4AP35499 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.08□□□□□ -2.24
SCN4AP35499 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.08□□□□□ -2.24
SCN4AP35499 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.08□□□□□ -2.24
SCN4AP35499 MTND1P11-201ENST00000456661 876 ntBASIC1.08□□□□□ -2.24
SCN4AP35499 AC145146.1-201ENST00000496370 254 ntBASIC1.08□□□□□ -2.24
SCN4AP35499 Y_RNA.693-201ENST00000516641 110 ntBASIC1.08□□□□□ -2.24
SCN4AP35499 MIR4299-201ENST00000577899 72 ntBASIC1.08□□□□□ -2.24
SCN4AP35499 AC005786.1-201ENST00000588553 154 ntBASIC1.08□□□□□ -2.24
SCN4AP35499 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SCN4AP35499 Y_RNA.68-201ENST00000362881 102 ntBASIC1.08□□□□□ -2.24
SCN4AP35499 Y_RNA.100-201ENST00000363141 102 ntBASIC1.08□□□□□ -2.24
SCN4AP35499 RNU6-280P-201ENST00000364145 104 ntBASIC1.08□□□□□ -2.24
SCN4AP35499 Y_RNA.372-201ENST00000365599 102 ntBASIC1.08□□□□□ -2.24
SCN4AP35499 SNORA8-201ENST00000384574 139 ntBASIC1.08□□□□□ -2.24
SCN4AP35499 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
SCN4AP35499 RPS23P4-201ENST00000487908 423 ntBASIC1.08□□□□□ -2.24
SCN4AP35499 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.08□□□□□ -2.24
SCN4AP35499 AC034114.1-201ENST00000520293 285 ntBASIC1.08□□□□□ -2.24
SCN4AP35499 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SCN4AP35499 MIR5094-201ENST00000578766 85 ntBASIC1.08□□□□□ -2.24
SCN4AP35499 POLR3GP2-201ENST00000588366 668 ntBASIC1.08□□□□□ -2.24
SCN4AP35499 FAM71BP1-201ENST00000604431 523 ntBASIC1.08□□□□□ -2.24
SCN4AP35499 AC139792.2-201ENST00000624218 587 ntBASIC1.08□□□□□ -2.24
SCN4AP35499 RNU5B-2P-201ENST00000363036 113 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 184.2 ms