Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 VN1R107P-201ENST00000601784 209 ntBASIC1.64□□□□□ -2.15
HOXC4P09017 AC016925.2-201ENST00000605108 242 ntBASIC1.64□□□□□ -2.15
HOXC4P09017 AC006157.1-201ENST00000611750 366 ntBASIC1.64□□□□□ -2.15
HOXC4P09017 MIR1244-1-201ENST00000612829 85 ntBASIC1.64□□□□□ -2.15
HOXC4P09017 AC022202.1-201ENST00000613515 211 ntBASIC1.64□□□□□ -2.15
HOXC4P09017 MIR5701-2-201ENST00000615634 82 ntBASIC1.64□□□□□ -2.15
HOXC4P09017 MIR1244-3-201ENST00000635744 85 ntBASIC1.64□□□□□ -2.15
HOXC4P09017 MIR1244-2-201ENST00000636449 85 ntBASIC1.64□□□□□ -2.15
HOXC4P09017 MIR1244-4-202ENST00000636813 85 ntBASIC1.64□□□□□ -2.15
HOXC4P09017 AL450472.1-202ENST00000637286 180 ntBASIC1.64□□□□□ -2.15
HOXC4P09017 ZNF702P-202ENST00000434269 1966 ntBASIC1.64□□□□□ -2.15
HOXC4P09017 AC009541.1-201ENST00000438279 2662 ntBASIC1.64□□□□□ -2.15
HOXC4P09017 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HOXC4P09017 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HOXC4P09017 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.63□□□□□ -2.15
HOXC4P09017 Y_RNA.40-201ENST00000362645 93 ntBASIC1.63□□□□□ -2.15
HOXC4P09017 RNU1-23P-201ENST00000363361 144 ntBASIC1.63□□□□□ -2.15
HOXC4P09017 Y_RNA.162-201ENST00000363683 102 ntBASIC1.63□□□□□ -2.15
HOXC4P09017 Y_RNA.252-201ENST00000364556 101 ntBASIC1.63□□□□□ -2.15
HOXC4P09017 MIR606-201ENST00000384851 96 ntBASIC1.63□□□□□ -2.15
HOXC4P09017 MIR518A2-201ENST00000384966 87 ntBASIC1.63□□□□□ -2.15
HOXC4P09017 MIR186-201ENST00000384988 86 ntBASIC1.63□□□□□ -2.15
HOXC4P09017 MIR487A-201ENST00000385009 80 ntBASIC1.63□□□□□ -2.15
HOXC4P09017 BTF3L4P2-201ENST00000392798 346 ntBASIC1.63□□□□□ -2.15
HOXC4P09017 RNA5SP450-201ENST00000411206 102 ntBASIC1.63□□□□□ -2.15
HOXC4P09017 EIF4EP2-201ENST00000422816 654 ntBASIC1.63□□□□□ -2.15
HOXC4P09017 RPL23AP3-201ENST00000453844 468 ntBASIC1.63□□□□□ -2.15
HOXC4P09017 AC006026.2-201ENST00000457376 180 ntBASIC1.63□□□□□ -2.15
HOXC4P09017 RPL30P10-201ENST00000488148 337 ntBASIC1.63□□□□□ -2.15
HOXC4P09017 RPL17P19-201ENST00000489069 552 ntBASIC1.63□□□□□ -2.15
HOXC4P09017 RNA5SP458-201ENST00000516188 119 ntBASIC1.63□□□□□ -2.15
HOXC4P09017 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.63□□□□□ -2.15
HOXC4P09017 SUB1P3-201ENST00000564581 315 ntBASIC1.63□□□□□ -2.15
HOXC4P09017 AC005899.2-201ENST00000584353 90 ntBASIC1.63□□□□□ -2.15
HOXC4P09017 SNORD58B-201ENST00000607313 66 ntBASIC1.63□□□□□ -2.15
HOXC4P09017 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.63□□□□□ -2.15
HOXC4P09017 AC087588.2-201ENST00000617667 426 ntBASIC1.63□□□□□ -2.15
HOXC4P09017 ZNF299P-201ENST00000406845 1804 ntBASIC1.62□□□□□ -2.15
HOXC4P09017 RNU6-1285P-201ENST00000363480 105 ntBASIC1.62□□□□□ -2.15
HOXC4P09017 Y_RNA.202-201ENST00000364083 110 ntBASIC1.62□□□□□ -2.15
HOXC4P09017 Y_RNA.504-201ENST00000384481 104 ntBASIC1.62□□□□□ -2.15
HOXC4P09017 Y_RNA.645-201ENST00000391229 102 ntBASIC1.62□□□□□ -2.15
HOXC4P09017 RNU6-1156P-201ENST00000410365 100 ntBASIC1.62□□□□□ -2.15
HOXC4P09017 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.62□□□□□ -2.15
HOXC4P09017 AL158823.1-201ENST00000418441 478 ntBASIC1.62□□□□□ -2.15
HOXC4P09017 MTND2P23-201ENST00000422990 651 ntBASIC1.62□□□□□ -2.15
HOXC4P09017 AC096920.1-201ENST00000423991 241 ntBASIC1.62□□□□□ -2.15
HOXC4P09017 RPL23AP95-201ENST00000426806 265 ntBASIC1.62□□□□□ -2.15
HOXC4P09017 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.62□□□□□ -2.15
HOXC4P09017 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.62□□□□□ -2.15
HOXC4P09017 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.62□□□□□ -2.15
HOXC4P09017 RPL39P29-201ENST00000447779 157 ntBASIC1.62□□□□□ -2.15
HOXC4P09017 AL137159.1-201ENST00000452808 512 ntBASIC1.62□□□□□ -2.15
HOXC4P09017 RNU7-169P-201ENST00000459456 61 ntBASIC1.62□□□□□ -2.15
HOXC4P09017 RPL23AP75-201ENST00000491601 451 ntBASIC1.62□□□□□ -2.15
HOXC4P09017 AF186996.7-201ENST00000492781 209 ntBASIC1.62□□□□□ -2.15
HOXC4P09017 RNU2-53P-201ENST00000516257 147 ntBASIC1.62□□□□□ -2.15
HOXC4P09017 RNU4-77P-201ENST00000516692 156 ntBASIC1.62□□□□□ -2.15
HOXC4P09017 RNU6-264P-201ENST00000517134 104 ntBASIC1.62□□□□□ -2.15
HOXC4P09017 HSPE1P4-201ENST00000550617 308 ntBASIC1.62□□□□□ -2.15
HOXC4P09017 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.62□□□□□ -2.15
HOXC4P09017 AL442663.2-201ENST00000554385 511 ntBASIC1.62□□□□□ -2.15
HOXC4P09017 AC024614.2-201ENST00000577584 372 ntBASIC1.62□□□□□ -2.15
HOXC4P09017 AC092447.9-201ENST00000603395 144 ntBASIC1.62□□□□□ -2.15
HOXC4P09017 AL078605.1-201ENST00000603529 500 ntBASIC1.62□□□□□ -2.15
HOXC4P09017 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.62□□□□□ -2.15
HOXC4P09017 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.62□□□□□ -2.15
HOXC4P09017 AC091812.1-201ENST00000432235 1948 ntBASIC1.62□□□□□ -2.15
HOXC4P09017 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HOXC4P09017 Y_RNA.314-201ENST00000365114 102 ntBASIC1.61□□□□□ -2.15
HOXC4P09017 Y_RNA.405-201ENST00000383979 100 ntBASIC1.61□□□□□ -2.15
HOXC4P09017 RNU6-26P-201ENST00000383985 107 ntBASIC1.61□□□□□ -2.15
HOXC4P09017 RNU6-1032P-201ENST00000384100 107 ntBASIC1.61□□□□□ -2.15
HOXC4P09017 SNORA29-201ENST00000384183 140 ntBASIC1.61□□□□□ -2.15
HOXC4P09017 Y_RNA.451-201ENST00000384200 100 ntBASIC1.61□□□□□ -2.15
HOXC4P09017 RNU6-738P-201ENST00000384531 106 ntBASIC1.61□□□□□ -2.15
HOXC4P09017 Y_RNA.524-201ENST00000384564 100 ntBASIC1.61□□□□□ -2.15
HOXC4P09017 Y_RNA.561-201ENST00000384694 100 ntBASIC1.61□□□□□ -2.15
HOXC4P09017 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
HOXC4P09017 SNORA17.3-201ENST00000391159 129 ntBASIC1.61□□□□□ -2.15
HOXC4P09017 AC092423.1-201ENST00000430165 186 ntBASIC1.61□□□□□ -2.15
HOXC4P09017 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.61□□□□□ -2.15
HOXC4P09017 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.61□□□□□ -2.15
HOXC4P09017 AL353752.1-201ENST00000454946 260 ntBASIC1.61□□□□□ -2.15
HOXC4P09017 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.61□□□□□ -2.15
HOXC4P09017 snoU13.6-201ENST00000458785 104 ntBASIC1.61□□□□□ -2.15
HOXC4P09017 U8.22-201ENST00000459141 133 ntBASIC1.61□□□□□ -2.15
HOXC4P09017 AC114801.2-201ENST00000503825 781 ntBASIC1.61□□□□□ -2.15
HOXC4P09017 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.61□□□□□ -2.15
HOXC4P09017 RNU6-307P-201ENST00000516743 106 ntBASIC1.61□□□□□ -2.15
HOXC4P09017 SNORA31.16-201ENST00000516773 139 ntBASIC1.61□□□□□ -2.15
HOXC4P09017 SNORD116.3-201ENST00000517176 78 ntBASIC1.61□□□□□ -2.15
HOXC4P09017 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.61□□□□□ -2.15
HOXC4P09017 GNAI2P1-201ENST00000541815 315 ntBASIC1.61□□□□□ -2.15
HOXC4P09017 MIR4299-201ENST00000577899 72 ntBASIC1.61□□□□□ -2.15
HOXC4P09017 AL355802.3-201ENST00000607571 545 ntBASIC1.61□□□□□ -2.15
HOXC4P09017 AC083806.3-201ENST00000614016 455 ntBASIC1.61□□□□□ -2.15
HOXC4P09017 AL159153.1-201ENST00000619688 317 ntBASIC1.61□□□□□ -2.15
HOXC4P09017 AC138305.3-201ENST00000624988 240 ntBASIC1.61□□□□□ -2.15
HOXC4P09017 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 211.3 ms