Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 RNU6-159P-201ENST00000391080 106 ntBASIC2.63□□□□□ -1.99
HOXD12P35452 SNORA3.2-201ENST00000408221 125 ntBASIC2.63□□□□□ -1.99
HOXD12P35452 MIR548F4-201ENST00000408515 105 ntBASIC2.63□□□□□ -1.99
HOXD12P35452 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.63□□□□□ -1.99
HOXD12P35452 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.63□□□□□ -1.99
HOXD12P35452 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.63□□□□□ -1.99
HOXD12P35452 AC145146.1-201ENST00000496370 254 ntBASIC2.63□□□□□ -1.99
HOXD12P35452 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.63□□□□□ -1.99
HOXD12P35452 AC131281.1-201ENST00000522984 164 ntBASIC2.63□□□□□ -1.99
HOXD12P35452 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.63□□□□□ -1.99
HOXD12P35452 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.63□□□□□ -1.99
HOXD12P35452 AC009127.3-201ENST00000570531 403 ntBASIC2.63□□□□□ -1.99
HOXD12P35452 MIR3126-201ENST00000577443 74 ntBASIC2.63□□□□□ -1.99
HOXD12P35452 MIR3605-201ENST00000583214 100 ntBASIC2.63□□□□□ -1.99
HOXD12P35452 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
HOXD12P35452 AL713866.2-201ENST00000603579 219 ntBASIC2.63□□□□□ -1.99
HOXD12P35452 AL355297.3-201ENST00000604082 446 ntBASIC2.63□□□□□ -1.99
HOXD12P35452 AL021879.1-201ENST00000611756 288 ntBASIC2.63□□□□□ -1.99
HOXD12P35452 PCGEM1.1-201ENST00000613431 131 ntBASIC2.63□□□□□ -1.99
HOXD12P35452 AC005520.5-201ENST00000613926 164 ntBASIC2.63□□□□□ -1.99
HOXD12P35452 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.63□□□□□ -1.99
HOXD12P35452 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HOXD12P35452 AC069528.2-201ENST00000624849 1991 ntBASIC2.62□□□□□ -1.99
HOXD12P35452 RNU6-1301P-201ENST00000362724 104 ntBASIC2.62□□□□□ -1.99
HOXD12P35452 Y_RNA.152-201ENST00000363578 100 ntBASIC2.62□□□□□ -1.99
HOXD12P35452 Y_RNA.210-201ENST00000364161 110 ntBASIC2.62□□□□□ -1.99
HOXD12P35452 SNORA63.7-201ENST00000365579 123 ntBASIC2.62□□□□□ -1.99
HOXD12P35452 RNA5SP213-201ENST00000391031 106 ntBASIC2.62□□□□□ -1.99
HOXD12P35452 RNA5SP201-201ENST00000410316 124 ntBASIC2.62□□□□□ -1.99
HOXD12P35452 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.62□□□□□ -1.99
HOXD12P35452 AC096638.1-201ENST00000444678 216 ntBASIC2.62□□□□□ -1.99
HOXD12P35452 snoU13.15-201ENST00000459407 104 ntBASIC2.62□□□□□ -1.99
HOXD12P35452 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.62□□□□□ -1.99
HOXD12P35452 MRPS35P2-201ENST00000508242 191 ntBASIC2.62□□□□□ -1.99
HOXD12P35452 HMGB3P3-201ENST00000510526 400 ntBASIC2.62□□□□□ -1.99
HOXD12P35452 RNU6-635P-201ENST00000516651 102 ntBASIC2.62□□□□□ -1.99
HOXD12P35452 RNU6-586P-201ENST00000517265 104 ntBASIC2.62□□□□□ -1.99
HOXD12P35452 CYCSP26-201ENST00000534107 320 ntBASIC2.62□□□□□ -1.99
HOXD12P35452 MYL12BP1-201ENST00000569826 507 ntBASIC2.62□□□□□ -1.99
HOXD12P35452 U4.3-201ENST00000621047 82 ntBASIC2.62□□□□□ -1.99
HOXD12P35452 ZNF204P-201ENST00000416749 2397 ntBASIC2.62□□□□□ -1.99
HOXD12P35452 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HOXD12P35452 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HOXD12P35452 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
HOXD12P35452 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
HOXD12P35452 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HOXD12P35452 RNU1-76P-201ENST00000362903 159 ntBASIC2.61□□□□□ -1.99
HOXD12P35452 RNU6-238P-201ENST00000363313 106 ntBASIC2.61□□□□□ -1.99
HOXD12P35452 RNU6-281P-201ENST00000384212 103 ntBASIC2.61□□□□□ -1.99
HOXD12P35452 Y_RNA.471-201ENST00000384312 102 ntBASIC2.61□□□□□ -1.99
HOXD12P35452 RNY3P4-201ENST00000384428 101 ntBASIC2.61□□□□□ -1.99
HOXD12P35452 SNORA80E-201ENST00000384744 137 ntBASIC2.61□□□□□ -1.99
HOXD12P35452 RNA5SP425-201ENST00000410336 112 ntBASIC2.61□□□□□ -1.99
HOXD12P35452 RNA5SP270-201ENST00000411361 118 ntBASIC2.61□□□□□ -1.99
HOXD12P35452 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.61□□□□□ -1.99
HOXD12P35452 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXD12P35452 AC112220.1-201ENST00000434628 355 ntBASIC2.61□□□□□ -1.99
HOXD12P35452 AC007215.1-201ENST00000464893 276 ntBASIC2.61□□□□□ -1.99
HOXD12P35452 AC010655.3-201ENST00000478818 450 ntBASIC2.61□□□□□ -1.99
HOXD12P35452 AC010469.2-201ENST00000496412 480 ntBASIC2.61□□□□□ -1.99
HOXD12P35452 IGKV3-31-201ENST00000523109 329 ntBASIC2.61□□□□□ -1.99
HOXD12P35452 AC093023.1-201ENST00000547375 507 ntBASIC2.61□□□□□ -1.99
HOXD12P35452 MIR4524B-201ENST00000581569 115 ntBASIC2.61□□□□□ -1.99
HOXD12P35452 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.61□□□□□ -1.99
HOXD12P35452 AC090517.3-201ENST00000625170 141 ntBASIC2.61□□□□□ -1.99
HOXD12P35452 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
HOXD12P35452 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HOXD12P35452 Y_RNA.176-201ENST00000363815 109 ntBASIC2.6□□□□□ -1.99
HOXD12P35452 U3.9-201ENST00000363823 204 ntBASIC2.6□□□□□ -1.99
HOXD12P35452 RNU6-873P-201ENST00000363833 107 ntBASIC2.6□□□□□ -1.99
HOXD12P35452 SNORA3A-201ENST00000364113 130 ntBASIC2.6□□□□□ -1.99
HOXD12P35452 RNU6-26P-201ENST00000383985 107 ntBASIC2.6□□□□□ -1.99
HOXD12P35452 RNU1-148P-201ENST00000384472 162 ntBASIC2.6□□□□□ -1.99
HOXD12P35452 MIR27B-201ENST00000385129 97 ntBASIC2.6□□□□□ -1.99
HOXD12P35452 AL356320.1-201ENST00000429616 163 ntBASIC2.6□□□□□ -1.99
HOXD12P35452 IFNA11P-201ENST00000446352 526 ntBASIC2.6□□□□□ -1.99
HOXD12P35452 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.6□□□□□ -1.99
HOXD12P35452 AC003982.1-202ENST00000469928 248 ntBASIC2.6□□□□□ -1.99
HOXD12P35452 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.6□□□□□ -1.99
HOXD12P35452 RNU6-397P-201ENST00000516226 104 ntBASIC2.6□□□□□ -1.99
HOXD12P35452 SNORA9.3-201ENST00000516383 129 ntBASIC2.6□□□□□ -1.99
HOXD12P35452 SNORA25.14-201ENST00000516481 132 ntBASIC2.6□□□□□ -1.99
HOXD12P35452 HSPE1P18-201ENST00000517602 280 ntBASIC2.6□□□□□ -1.99
HOXD12P35452 AC034114.1-201ENST00000520293 285 ntBASIC2.6□□□□□ -1.99
HOXD12P35452 EIF4A1P12-201ENST00000551910 141 ntBASIC2.6□□□□□ -1.99
HOXD12P35452 AC090517.1-201ENST00000569307 266 ntBASIC2.6□□□□□ -1.99
HOXD12P35452 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.6□□□□□ -1.99
HOXD12P35452 AL137847.3-201ENST00000611521 109 ntBASIC2.6□□□□□ -1.99
HOXD12P35452 U6.92-201ENST00000636464 89 ntBASIC2.6□□□□□ -1.99
HOXD12P35452 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
HOXD12P35452 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HOXD12P35452 BX322639.1-202ENST00000423987 2213 ntBASIC2.6□□□□□ -1.99
HOXD12P35452 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.59□□□□□ -1.99
HOXD12P35452 RNA5SP361-201ENST00000362686 118 ntBASIC2.59□□□□□ -1.99
HOXD12P35452 Y_RNA.47-201ENST00000362697 108 ntBASIC2.59□□□□□ -1.99
HOXD12P35452 Y_RNA.144-201ENST00000363521 113 ntBASIC2.59□□□□□ -1.99
HOXD12P35452 RNU6-280P-201ENST00000364145 104 ntBASIC2.59□□□□□ -1.99
HOXD12P35452 Y_RNA.458-201ENST00000384240 102 ntBASIC2.59□□□□□ -1.99
HOXD12P35452 RNU6-318P-201ENST00000384283 103 ntBASIC2.59□□□□□ -1.99
HOXD12P35452 SNORA46.1-201ENST00000391069 153 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 256.6 ms