Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SHISA3A0PJX4 ATP5EP1-201ENST00000510257 156 ntBASIC3.15□□□□□ -1.91
SHISA3A0PJX4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.15□□□□□ -1.91
SHISA3A0PJX4 RNA5SP20-201ENST00000515976 84 ntBASIC3.15□□□□□ -1.91
SHISA3A0PJX4 SCARNA17.1-201ENST00000516211 143 ntBASIC3.15□□□□□ -1.91
SHISA3A0PJX4 RNU6-561P-201ENST00000516222 102 ntBASIC3.15□□□□□ -1.91
SHISA3A0PJX4 SCARNA17.2-201ENST00000516334 143 ntBASIC3.15□□□□□ -1.91
SHISA3A0PJX4 RNU2-34P-201ENST00000516534 121 ntBASIC3.15□□□□□ -1.91
SHISA3A0PJX4 SCARNA17.4-201ENST00000614296 143 ntBASIC3.15□□□□□ -1.91
SHISA3A0PJX4 UCA1.1-201ENST00000620952 75 ntBASIC3.15□□□□□ -1.91
SHISA3A0PJX4 MIR6844-201ENST00000637122 62 ntBASIC3.15□□□□□ -1.91
SHISA3A0PJX4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SHISA3A0PJX4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SHISA3A0PJX4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SHISA3A0PJX4 MAPK10-322ENST00000641485 4530 ntBASIC3.14□□□□□ -1.91
SHISA3A0PJX4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SHISA3A0PJX4 AC091564.4-201ENST00000533934 2194 ntBASIC3.14□□□□□ -1.91
SHISA3A0PJX4 RNU1-72P-201ENST00000362976 153 ntBASIC3.14□□□□□ -1.91
SHISA3A0PJX4 RNA5SP97-201ENST00000365006 84 ntBASIC3.14□□□□□ -1.91
SHISA3A0PJX4 RNU6-80P-201ENST00000384195 107 ntBASIC3.14□□□□□ -1.91
SHISA3A0PJX4 SNORD14D-201ENST00000384390 87 ntBASIC3.14□□□□□ -1.91
SHISA3A0PJX4 RNU1-13P-201ENST00000384499 162 ntBASIC3.14□□□□□ -1.91
SHISA3A0PJX4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SHISA3A0PJX4 AL512604.1-201ENST00000404812 257 ntBASIC3.14□□□□□ -1.91
SHISA3A0PJX4 SNORA79-201ENST00000408376 140 ntBASIC3.14□□□□□ -1.91
SHISA3A0PJX4 RNA5SP317-201ENST00000410176 116 ntBASIC3.14□□□□□ -1.91
SHISA3A0PJX4 RNA5SP311-201ENST00000411290 116 ntBASIC3.14□□□□□ -1.91
SHISA3A0PJX4 RN7SKP101-201ENST00000411376 320 ntBASIC3.14□□□□□ -1.91
SHISA3A0PJX4 AL356095.1-201ENST00000417217 199 ntBASIC3.14□□□□□ -1.91
SHISA3A0PJX4 AL159169.1-201ENST00000421119 127 ntBASIC3.14□□□□□ -1.91
SHISA3A0PJX4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.14□□□□□ -1.91
SHISA3A0PJX4 MRPS36P2-201ENST00000512569 299 ntBASIC3.14□□□□□ -1.91
SHISA3A0PJX4 RNU6-1333P-201ENST00000516162 93 ntBASIC3.14□□□□□ -1.91
SHISA3A0PJX4 RNA5SP315-201ENST00000516340 116 ntBASIC3.14□□□□□ -1.91
SHISA3A0PJX4 RNU6-579P-201ENST00000516879 102 ntBASIC3.14□□□□□ -1.91
SHISA3A0PJX4 RNA5SP312-201ENST00000517068 116 ntBASIC3.14□□□□□ -1.91
SHISA3A0PJX4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.14□□□□□ -1.91
SHISA3A0PJX4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.14□□□□□ -1.91
SHISA3A0PJX4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
SHISA3A0PJX4 AL359881.1-201ENST00000602916 267 ntBASIC3.14□□□□□ -1.91
SHISA3A0PJX4 MIR6867-201ENST00000610636 67 ntBASIC3.14□□□□□ -1.91
SHISA3A0PJX4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
SHISA3A0PJX4 AP001340.1-201ENST00000624405 217 ntBASIC3.14□□□□□ -1.91
SHISA3A0PJX4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SHISA3A0PJX4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SHISA3A0PJX4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.13□□□□□ -1.91
SHISA3A0PJX4 Y_RNA.521-201ENST00000384560 114 ntBASIC3.13□□□□□ -1.91
SHISA3A0PJX4 Y_RNA.542-201ENST00000384641 111 ntBASIC3.13□□□□□ -1.91
SHISA3A0PJX4 SNORA20-201ENST00000384662 132 ntBASIC3.13□□□□□ -1.91
SHISA3A0PJX4 RNU6-768P-201ENST00000384683 107 ntBASIC3.13□□□□□ -1.91
SHISA3A0PJX4 SNORA75.5-201ENST00000391291 81 ntBASIC3.13□□□□□ -1.91
SHISA3A0PJX4 MIR1278-201ENST00000408753 81 ntBASIC3.13□□□□□ -1.91
SHISA3A0PJX4 RNU6-1211P-201ENST00000459179 105 ntBASIC3.13□□□□□ -1.91
SHISA3A0PJX4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.13□□□□□ -1.91
SHISA3A0PJX4 RPL23AP54-201ENST00000495129 419 ntBASIC3.13□□□□□ -1.91
SHISA3A0PJX4 AC025647.1-201ENST00000517879 253 ntBASIC3.13□□□□□ -1.91
SHISA3A0PJX4 MIR4286-201ENST00000580651 93 ntBASIC3.13□□□□□ -1.91
SHISA3A0PJX4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.13□□□□□ -1.91
SHISA3A0PJX4 AC091953.5-201ENST00000622919 233 ntBASIC3.13□□□□□ -1.91
SHISA3A0PJX4 MIR7157-201ENST00000635801 60 ntBASIC3.13□□□□□ -1.91
SHISA3A0PJX4 AP000553.6-201ENST00000641242 118 ntBASIC3.13□□□□□ -1.91
SHISA3A0PJX4 CENPCP1-201ENST00000533085 2578 ntBASIC3.13□□□□□ -1.91
SHISA3A0PJX4 AC007256.1-201ENST00000392253 2765 ntBASIC3.13□□□□□ -1.91
SHISA3A0PJX4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SHISA3A0PJX4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.13□□□□□ -1.91
SHISA3A0PJX4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SHISA3A0PJX4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.13□□□□□ -1.91
SHISA3A0PJX4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SHISA3A0PJX4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.13□□□□□ -1.91
SHISA3A0PJX4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SHISA3A0PJX4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SHISA3A0PJX4 MFSD8-236ENST00000641509 4050 ntBASIC3.12□□□□□ -1.91
SHISA3A0PJX4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.12□□□□□ -1.91
SHISA3A0PJX4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SHISA3A0PJX4 AL356292.1-201ENST00000283110 373 ntBASIC3.12□□□□□ -1.91
SHISA3A0PJX4 Y_RNA.261-201ENST00000364631 102 ntBASIC3.12□□□□□ -1.91
SHISA3A0PJX4 Y_RNA.353-201ENST00000365440 108 ntBASIC3.12□□□□□ -1.91
SHISA3A0PJX4 SNORD6-201ENST00000365444 73 ntBASIC3.12□□□□□ -1.91
SHISA3A0PJX4 RNU6-597P-201ENST00000365620 102 ntBASIC3.12□□□□□ -1.91
SHISA3A0PJX4 RNA5SP293-201ENST00000410527 113 ntBASIC3.12□□□□□ -1.91
SHISA3A0PJX4 RNU2-55P-201ENST00000411146 174 ntBASIC3.12□□□□□ -1.91
SHISA3A0PJX4 AC126124.2-201ENST00000413542 321 ntBASIC3.12□□□□□ -1.91
SHISA3A0PJX4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.12□□□□□ -1.91
SHISA3A0PJX4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.12□□□□□ -1.91
SHISA3A0PJX4 AC008155.2-201ENST00000464337 397 ntBASIC3.12□□□□□ -1.91
SHISA3A0PJX4 AC010531.2-201ENST00000465012 153 ntBASIC3.12□□□□□ -1.91
SHISA3A0PJX4 AC092991.1-201ENST00000477176 376 ntBASIC3.12□□□□□ -1.91
SHISA3A0PJX4 RNA5SP164-201ENST00000516533 110 ntBASIC3.12□□□□□ -1.91
SHISA3A0PJX4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.12□□□□□ -1.91
SHISA3A0PJX4 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.12□□□□□ -1.91
SHISA3A0PJX4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.12□□□□□ -1.91
SHISA3A0PJX4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SHISA3A0PJX4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.12□□□□□ -1.91
SHISA3A0PJX4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SHISA3A0PJX4 AL049781.1-201ENST00000623195 3585 ntBASIC3.12□□□□□ -1.91
SHISA3A0PJX4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SHISA3A0PJX4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
SHISA3A0PJX4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
SHISA3A0PJX4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SHISA3A0PJX4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 375.9 ms