Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 SNORD14.1-201ENST00000365609 90 ntBASIC2.78□□□□□ -1.96
TRIM43Q96BQ3 RNU6-245P-201ENST00000384020 107 ntBASIC2.78□□□□□ -1.96
TRIM43Q96BQ3 MIR10B-201ENST00000385011 110 ntBASIC2.78□□□□□ -1.96
TRIM43Q96BQ3 AL079342.1-201ENST00000401460 267 ntBASIC2.78□□□□□ -1.96
TRIM43Q96BQ3 MIR1294-201ENST00000408503 142 ntBASIC2.78□□□□□ -1.96
TRIM43Q96BQ3 RNU6-101P-201ENST00000410323 104 ntBASIC2.78□□□□□ -1.96
TRIM43Q96BQ3 EIF1P2-201ENST00000428233 350 ntBASIC2.78□□□□□ -1.96
TRIM43Q96BQ3 AC027124.2-201ENST00000428249 105 ntBASIC2.78□□□□□ -1.96
TRIM43Q96BQ3 AC096638.1-201ENST00000444678 216 ntBASIC2.78□□□□□ -1.96
TRIM43Q96BQ3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.78□□□□□ -1.96
TRIM43Q96BQ3 U8.22-201ENST00000459141 133 ntBASIC2.78□□□□□ -1.96
TRIM43Q96BQ3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.78□□□□□ -1.96
TRIM43Q96BQ3 SNORA25.14-201ENST00000516481 132 ntBASIC2.78□□□□□ -1.96
TRIM43Q96BQ3 AL442163.3-201ENST00000554110 156 ntBASIC2.78□□□□□ -1.96
TRIM43Q96BQ3 MIR4680-201ENST00000580906 66 ntBASIC2.78□□□□□ -1.96
TRIM43Q96BQ3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.78□□□□□ -1.96
TRIM43Q96BQ3 AC005562.2-201ENST00000618264 111 ntBASIC2.78□□□□□ -1.96
TRIM43Q96BQ3 RNU6-873P-201ENST00000363833 107 ntBASIC2.77□□□□□ -1.97
TRIM43Q96BQ3 SNORD32B-201ENST00000364460 84 ntBASIC2.77□□□□□ -1.97
TRIM43Q96BQ3 Y_RNA.389-201ENST00000383924 113 ntBASIC2.77□□□□□ -1.97
TRIM43Q96BQ3 MIR549A-201ENST00000385268 96 ntBASIC2.77□□□□□ -1.97
TRIM43Q96BQ3 CBX3P6-201ENST00000430257 527 ntBASIC2.77□□□□□ -1.97
TRIM43Q96BQ3 RPL39P40-201ENST00000445481 146 ntBASIC2.77□□□□□ -1.97
TRIM43Q96BQ3 MTCO3P8-201ENST00000453691 755 ntBASIC2.77□□□□□ -1.97
TRIM43Q96BQ3 AC093852.1-201ENST00000503587 266 ntBASIC2.77□□□□□ -1.97
TRIM43Q96BQ3 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.77□□□□□ -1.97
TRIM43Q96BQ3 AC093023.1-201ENST00000547375 507 ntBASIC2.77□□□□□ -1.97
TRIM43Q96BQ3 MIR1273D-201ENST00000577266 86 ntBASIC2.77□□□□□ -1.97
TRIM43Q96BQ3 MIR3605-201ENST00000583214 100 ntBASIC2.77□□□□□ -1.97
TRIM43Q96BQ3 AL360085.1-201ENST00000604713 532 ntBASIC2.77□□□□□ -1.97
TRIM43Q96BQ3 AL355297.2-201ENST00000604792 129 ntBASIC2.77□□□□□ -1.97
TRIM43Q96BQ3 RPL17P51-201ENST00000605218 238 ntBASIC2.77□□□□□ -1.97
TRIM43Q96BQ3 AL162373.1-201ENST00000620433 407 ntBASIC2.77□□□□□ -1.97
TRIM43Q96BQ3 AC135776.4-201ENST00000624300 1904 ntBASIC2.76□□□□□ -1.97
TRIM43Q96BQ3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM43Q96BQ3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.76□□□□□ -1.97
TRIM43Q96BQ3 SNORA18.2-201ENST00000383865 132 ntBASIC2.76□□□□□ -1.97
TRIM43Q96BQ3 SNORA51.11-201ENST00000384442 131 ntBASIC2.76□□□□□ -1.97
TRIM43Q96BQ3 RNA5SP247-201ENST00000411181 105 ntBASIC2.76□□□□□ -1.97
TRIM43Q96BQ3 RN7SL75P-201ENST00000461926 281 ntBASIC2.76□□□□□ -1.97
TRIM43Q96BQ3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.76□□□□□ -1.97
TRIM43Q96BQ3 AC040926.1-201ENST00000530195 238 ntBASIC2.76□□□□□ -1.97
TRIM43Q96BQ3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.76□□□□□ -1.97
TRIM43Q96BQ3 AC124312.5-201ENST00000604451 268 ntBASIC2.76□□□□□ -1.97
TRIM43Q96BQ3 PART1_1.1-201ENST00000611761 217 ntBASIC2.76□□□□□ -1.97
TRIM43Q96BQ3 TCL6_2.1-201ENST00000615162 119 ntBASIC2.76□□□□□ -1.97
TRIM43Q96BQ3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM43Q96BQ3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.75□□□□□ -1.97
TRIM43Q96BQ3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.75□□□□□ -1.97
TRIM43Q96BQ3 AP006437.1-201ENST00000641440 3685 ntBASIC2.75□□□□□ -1.97
TRIM43Q96BQ3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
TRIM43Q96BQ3 Y_RNA.27-201ENST00000362540 103 ntBASIC2.75□□□□□ -1.97
TRIM43Q96BQ3 RNU6-944P-201ENST00000364023 107 ntBASIC2.75□□□□□ -1.97
TRIM43Q96BQ3 Y_RNA.455-201ENST00000384230 98 ntBASIC2.75□□□□□ -1.97
TRIM43Q96BQ3 Y_RNA.527-201ENST00000384573 102 ntBASIC2.75□□□□□ -1.97
TRIM43Q96BQ3 AL359511.1-201ENST00000402970 211 ntBASIC2.75□□□□□ -1.97
TRIM43Q96BQ3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TRIM43Q96BQ3 HMGN2P35-201ENST00000412164 270 ntBASIC2.75□□□□□ -1.97
TRIM43Q96BQ3 RPS29P6-201ENST00000438196 145 ntBASIC2.75□□□□□ -1.97
TRIM43Q96BQ3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.75□□□□□ -1.97
TRIM43Q96BQ3 AC234781.5-201ENST00000508429 271 ntBASIC2.75□□□□□ -1.97
TRIM43Q96BQ3 RNU6-327P-201ENST00000516270 127 ntBASIC2.75□□□□□ -1.97
TRIM43Q96BQ3 SNORA48.11-201ENST00000517015 89 ntBASIC2.75□□□□□ -1.97
TRIM43Q96BQ3 AC022616.4-201ENST00000522985 181 ntBASIC2.75□□□□□ -1.97
TRIM43Q96BQ3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.75□□□□□ -1.97
TRIM43Q96BQ3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.75□□□□□ -1.97
TRIM43Q96BQ3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
TRIM43Q96BQ3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.75□□□□□ -1.97
TRIM43Q96BQ3 AC104695.3-201ENST00000604052 296 ntBASIC2.75□□□□□ -1.97
TRIM43Q96BQ3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
TRIM43Q96BQ3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TRIM43Q96BQ3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 AC093831.2-201ENST00000624393 3427 ntBASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 RNU4-50P-201ENST00000364361 141 ntBASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 RNU6-26P-201ENST00000383985 107 ntBASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 RNU6-281P-201ENST00000384212 103 ntBASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 RNY3P4-201ENST00000384428 101 ntBASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 MIR95-201ENST00000385072 81 ntBASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 Y_RNA.645-201ENST00000391229 102 ntBASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 AC004386.2-201ENST00000441858 148 ntBASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 AC104389.3-201ENST00000445629 235 ntBASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 CBX3P7-201ENST00000532876 502 ntBASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 AC018630.3-201ENST00000542637 96 ntBASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 MIR5006-201ENST00000583027 110 ntBASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 AC125232.2-201ENST00000592457 143 ntBASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 AL390123.1-201ENST00000603216 237 ntBASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 AC046143.2-201ENST00000609789 160 ntBASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 AC010999.1-201ENST00000611856 324 ntBASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 AL353997.5-201ENST00000618886 171 ntBASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 Z82209.1-201ENST00000422141 2135 ntBASIC2.74□□□□□ -1.97
TRIM43Q96BQ3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms