Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RFC5P40937 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RFC5P40937 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RFC5P40937 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RFC5P40937 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RFC5P40937 SNORD116-13-201ENST00000384408 92 ntBASIC4.29□□□□□ -1.72
RFC5P40937 SNORA20-201ENST00000384662 132 ntBASIC4.29□□□□□ -1.72
RFC5P40937 MIR554-201ENST00000384874 96 ntBASIC4.29□□□□□ -1.72
RFC5P40937 SNORA79-201ENST00000408376 140 ntBASIC4.29□□□□□ -1.72
RFC5P40937 RN7SKP156-201ENST00000410308 342 ntBASIC4.29□□□□□ -1.72
RFC5P40937 RNU4-43P-201ENST00000410628 137 ntBASIC4.29□□□□□ -1.72
RFC5P40937 AC008134.1-201ENST00000420943 193 ntBASIC4.29□□□□□ -1.72
RFC5P40937 U3.44-201ENST00000458938 192 ntBASIC4.29□□□□□ -1.72
RFC5P40937 RNU6-1211P-201ENST00000459179 105 ntBASIC4.29□□□□□ -1.72
RFC5P40937 RPL23AP54-201ENST00000495129 419 ntBASIC4.29□□□□□ -1.72
RFC5P40937 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.29□□□□□ -1.72
RFC5P40937 MRPS36P2-201ENST00000512569 299 ntBASIC4.29□□□□□ -1.72
RFC5P40937 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.29□□□□□ -1.72
RFC5P40937 RNA5SP20-201ENST00000515976 84 ntBASIC4.29□□□□□ -1.72
RFC5P40937 RNA5SP164-201ENST00000516533 110 ntBASIC4.29□□□□□ -1.72
RFC5P40937 SNORD59.2-201ENST00000516873 68 ntBASIC4.29□□□□□ -1.72
RFC5P40937 AC034105.4-201ENST00000568304 277 ntBASIC4.29□□□□□ -1.72
RFC5P40937 AC110079.1-202ENST00000635213 138 ntBASIC4.29□□□□□ -1.72
RFC5P40937 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RFC5P40937 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RFC5P40937 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
RFC5P40937 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFC5P40937 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFC5P40937 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFC5P40937 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.28□□□□□ -1.72
RFC5P40937 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RFC5P40937 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RFC5P40937 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RFC5P40937 RNA5SP322-201ENST00000363617 119 ntBASIC4.28□□□□□ -1.72
RFC5P40937 RNU6-944P-201ENST00000364023 107 ntBASIC4.28□□□□□ -1.72
RFC5P40937 SNORD116-14-201ENST00000383894 92 ntBASIC4.28□□□□□ -1.72
RFC5P40937 SNORD116-17-201ENST00000383929 92 ntBASIC4.28□□□□□ -1.72
RFC5P40937 SNORD116-15-201ENST00000384445 92 ntBASIC4.28□□□□□ -1.72
RFC5P40937 SNORD116-19-201ENST00000384729 92 ntBASIC4.28□□□□□ -1.72
RFC5P40937 RNU6ATAC-201ENST00000408749 126 ntBASIC4.28□□□□□ -1.72
RFC5P40937 SNORA57.3-201ENST00000411095 141 ntBASIC4.28□□□□□ -1.72
RFC5P40937 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.28□□□□□ -1.72
RFC5P40937 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.28□□□□□ -1.72
RFC5P40937 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.28□□□□□ -1.72
RFC5P40937 RNU6-561P-201ENST00000516222 102 ntBASIC4.28□□□□□ -1.72
RFC5P40937 AC018630.3-201ENST00000542637 96 ntBASIC4.28□□□□□ -1.72
RFC5P40937 AC087499.8-201ENST00000578406 226 ntBASIC4.28□□□□□ -1.72
RFC5P40937 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.28□□□□□ -1.72
RFC5P40937 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.28□□□□□ -1.72
RFC5P40937 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFC5P40937 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RFC5P40937 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.28□□□□□ -1.73
RFC5P40937 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.27□□□□□ -1.73
RFC5P40937 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFC5P40937 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.27□□□□□ -1.73
RFC5P40937 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RFC5P40937 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RFC5P40937 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFC5P40937 Y_RNA.71-201ENST00000362892 104 ntBASIC4.27□□□□□ -1.73
RFC5P40937 Y_RNA.273-201ENST00000364703 102 ntBASIC4.27□□□□□ -1.73
RFC5P40937 RNU6-438P-201ENST00000365561 103 ntBASIC4.27□□□□□ -1.73
RFC5P40937 RNA5SP496-201ENST00000391240 109 ntBASIC4.27□□□□□ -1.73
RFC5P40937 AL512604.1-201ENST00000404812 257 ntBASIC4.27□□□□□ -1.73
RFC5P40937 SNORA11-201ENST00000408789 128 ntBASIC4.27□□□□□ -1.73
RFC5P40937 AL135786.1-201ENST00000415892 214 ntBASIC4.27□□□□□ -1.73
RFC5P40937 RNU6-437P-201ENST00000459408 95 ntBASIC4.27□□□□□ -1.73
RFC5P40937 RN7SL542P-201ENST00000467147 294 ntBASIC4.27□□□□□ -1.73
RFC5P40937 ATP5EP1-201ENST00000510257 156 ntBASIC4.27□□□□□ -1.73
RFC5P40937 RNU6-1333P-201ENST00000516162 93 ntBASIC4.27□□□□□ -1.73
RFC5P40937 SCARNA14-201ENST00000516903 136 ntBASIC4.27□□□□□ -1.73
RFC5P40937 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
RFC5P40937 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.27□□□□□ -1.73
RFC5P40937 AC091564.4-201ENST00000533934 2194 ntBASIC4.27□□□□□ -1.73
RFC5P40937 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
RFC5P40937 IPO8P1-201ENST00000455509 3109 ntBASIC4.26□□□□□ -1.73
RFC5P40937 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RFC5P40937 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
RFC5P40937 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RFC5P40937 AL356292.1-201ENST00000283110 373 ntBASIC4.26□□□□□ -1.73
RFC5P40937 Y_RNA.393-201ENST00000383936 102 ntBASIC4.26□□□□□ -1.73
RFC5P40937 RNU1-89P-201ENST00000384592 164 ntBASIC4.26□□□□□ -1.73
RFC5P40937 Y_RNA.542-201ENST00000384641 111 ntBASIC4.26□□□□□ -1.73
RFC5P40937 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.26□□□□□ -1.73
RFC5P40937 AC016717.1-201ENST00000448918 286 ntBASIC4.26□□□□□ -1.73
RFC5P40937 RNU1-45P-201ENST00000517191 141 ntBASIC4.26□□□□□ -1.73
RFC5P40937 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
RFC5P40937 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.26□□□□□ -1.73
RFC5P40937 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
RFC5P40937 MAPK10-372ENST00000641954 3413 ntBASIC4.25□□□□□ -1.73
RFC5P40937 Y_RNA.218-201ENST00000364218 104 ntBASIC4.25□□□□□ -1.73
RFC5P40937 Y_RNA.261-201ENST00000364631 102 ntBASIC4.25□□□□□ -1.73
RFC5P40937 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
RFC5P40937 RNU6-1235P-201ENST00000384559 107 ntBASIC4.25□□□□□ -1.73
RFC5P40937 RNU6-768P-201ENST00000384683 107 ntBASIC4.25□□□□□ -1.73
RFC5P40937 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RFC5P40937 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.25□□□□□ -1.73
RFC5P40937 AC016925.1-201ENST00000458303 298 ntBASIC4.25□□□□□ -1.73
RFC5P40937 RNU7-197P-201ENST00000458836 62 ntBASIC4.25□□□□□ -1.73
RFC5P40937 RNU6-498P-201ENST00000459468 107 ntBASIC4.25□□□□□ -1.73
RFC5P40937 AC023632.4-201ENST00000517783 191 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms