Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 RBMY2UP-201ENST00000453474 324 ntBASIC4.41□□□□□ -1.7
CCDC85AQ96PX6 AC091179.1-201ENST00000461606 579 ntBASIC4.41□□□□□ -1.7
CCDC85AQ96PX6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC85AQ96PX6 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC85AQ96PX6 MIR5006-201ENST00000583027 110 ntBASIC4.41□□□□□ -1.7
CCDC85AQ96PX6 AC012493.2-201ENST00000595083 291 ntBASIC4.41□□□□□ -1.7
CCDC85AQ96PX6 MIR6076-201ENST00000617521 113 ntBASIC4.41□□□□□ -1.7
CCDC85AQ96PX6 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.41□□□□□ -1.7
CCDC85AQ96PX6 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CCDC85AQ96PX6 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC85AQ96PX6 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC85AQ96PX6 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC85AQ96PX6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC85AQ96PX6 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC85AQ96PX6 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC85AQ96PX6 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC85AQ96PX6 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC85AQ96PX6 AC134026.1-201ENST00000623249 2239 ntBASIC4.4□□□□□ -1.7
CCDC85AQ96PX6 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
CCDC85AQ96PX6 RNU6-199P-201ENST00000362954 107 ntBASIC4.4□□□□□ -1.71
CCDC85AQ96PX6 Y_RNA.127-201ENST00000363386 109 ntBASIC4.4□□□□□ -1.71
CCDC85AQ96PX6 RNU1-33P-201ENST00000364249 162 ntBASIC4.4□□□□□ -1.71
CCDC85AQ96PX6 Y_RNA.353-201ENST00000365440 108 ntBASIC4.4□□□□□ -1.71
CCDC85AQ96PX6 Y_RNA.456-201ENST00000384232 111 ntBASIC4.4□□□□□ -1.71
CCDC85AQ96PX6 snoU13.28-201ENST00000459235 104 ntBASIC4.4□□□□□ -1.71
CCDC85AQ96PX6 RPL32P34-201ENST00000486380 400 ntBASIC4.4□□□□□ -1.71
CCDC85AQ96PX6 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC85AQ96PX6 SNORA25.12-201ENST00000516202 82 ntBASIC4.4□□□□□ -1.71
CCDC85AQ96PX6 AC109810.1-201ENST00000534066 224 ntBASIC4.4□□□□□ -1.71
CCDC85AQ96PX6 MIR5195-201ENST00000583555 115 ntBASIC4.4□□□□□ -1.71
CCDC85AQ96PX6 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC85AQ96PX6 MIR3651-201ENST00000630427 90 ntBASIC4.4□□□□□ -1.71
CCDC85AQ96PX6 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC85AQ96PX6 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CCDC85AQ96PX6 snoU2_19.4-201ENST00000364329 80 ntBASIC4.39□□□□□ -1.71
CCDC85AQ96PX6 MIR616-201ENST00000385293 97 ntBASIC4.39□□□□□ -1.71
CCDC85AQ96PX6 MIR526A2-201ENST00000390198 65 ntBASIC4.39□□□□□ -1.71
CCDC85AQ96PX6 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CCDC85AQ96PX6 RNA5SP39-201ENST00000411245 120 ntBASIC4.39□□□□□ -1.71
CCDC85AQ96PX6 MTND4LP9-201ENST00000427694 174 ntBASIC4.39□□□□□ -1.71
CCDC85AQ96PX6 AL135790.2-201ENST00000437701 267 ntBASIC4.39□□□□□ -1.71
CCDC85AQ96PX6 RPL23AP70-201ENST00000483361 460 ntBASIC4.39□□□□□ -1.71
CCDC85AQ96PX6 RNA5SP272-201ENST00000516095 111 ntBASIC4.39□□□□□ -1.71
CCDC85AQ96PX6 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC85AQ96PX6 AC025281.1-201ENST00000567026 265 ntBASIC4.39□□□□□ -1.71
CCDC85AQ96PX6 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC85AQ96PX6 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC85AQ96PX6 AC008873.1-201ENST00000625051 138 ntBASIC4.39□□□□□ -1.71
CCDC85AQ96PX6 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC85AQ96PX6 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC85AQ96PX6 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC85AQ96PX6 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC85AQ96PX6 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
CCDC85AQ96PX6 SNORD87-201ENST00000364849 89 ntBASIC4.38□□□□□ -1.71
CCDC85AQ96PX6 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.38□□□□□ -1.71
CCDC85AQ96PX6 SNORD20-201ENST00000384550 80 ntBASIC4.38□□□□□ -1.71
CCDC85AQ96PX6 RPL23AP58-201ENST00000440453 469 ntBASIC4.38□□□□□ -1.71
CCDC85AQ96PX6 AC115115.1-201ENST00000449927 248 ntBASIC4.38□□□□□ -1.71
CCDC85AQ96PX6 AC146507.2-201ENST00000460608 476 ntBASIC4.38□□□□□ -1.71
CCDC85AQ96PX6 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC85AQ96PX6 SNORA70.12-201ENST00000516084 153 ntBASIC4.38□□□□□ -1.71
CCDC85AQ96PX6 RNU2-27P-201ENST00000516185 142 ntBASIC4.38□□□□□ -1.71
CCDC85AQ96PX6 DEFB131C-201ENST00000528817 165 ntBASIC4.38□□□□□ -1.71
CCDC85AQ96PX6 MIR4474-201ENST00000579189 78 ntBASIC4.38□□□□□ -1.71
CCDC85AQ96PX6 AL391903.3-201ENST00000612158 163 ntBASIC4.38□□□□□ -1.71
CCDC85AQ96PX6 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC85AQ96PX6 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC85AQ96PX6 AC002546.1-201ENST00000588041 2504 ntBASIC4.38□□□□□ -1.71
CCDC85AQ96PX6 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC85AQ96PX6 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC85AQ96PX6 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CCDC85AQ96PX6 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 RNU1-75P-201ENST00000347264 129 ntBASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 RNU6-529P-201ENST00000363383 104 ntBASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 U3.8-201ENST00000363675 217 ntBASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 RNU6-215P-201ENST00000365169 102 ntBASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 Y_RNA.341-201ENST00000365341 102 ntBASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 SNORD116-14-201ENST00000383894 92 ntBASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 SNORD116-17-201ENST00000383929 92 ntBASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 SNORD116-15-201ENST00000384445 92 ntBASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 SNORD116-19-201ENST00000384729 92 ntBASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 RNU6-855P-201ENST00000410395 104 ntBASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 RNA5SP120-201ENST00000410900 112 ntBASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 AC023141.4-201ENST00000412031 328 ntBASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 AIMP1P2-201ENST00000425294 312 ntBASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 AC005326.1-201ENST00000429197 123 ntBASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 RPS3P1-201ENST00000456781 192 ntBASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 AP002884.2-201ENST00000471647 395 ntBASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 RN7SKP209-201ENST00000516888 304 ntBASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 RNU1-117P-201ENST00000517041 158 ntBASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 IGKV2-26-201ENST00000518305 343 ntBASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 MIR5047-201ENST00000579212 100 ntBASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 HSPE1P7-201ENST00000604681 321 ntBASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 MIR4727-201ENST00000622232 55 ntBASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC85AQ96PX6 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC85AQ96PX6 RNU4-15P-201ENST00000362613 141 ntBASIC4.36□□□□□ -1.71
CCDC85AQ96PX6 MIR147B-201ENST00000390185 80 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 177.2 ms