Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 SNORA31.23-201ENST00000517219 133 ntBASIC3.47□□□□□ -1.85
EPHB3P54753 CKS1BP7-201ENST00000522230 235 ntBASIC3.47□□□□□ -1.85
EPHB3P54753 MIR548X2-201ENST00000579776 100 ntBASIC3.47□□□□□ -1.85
EPHB3P54753 DEFB117-201ENST00000602356 141 ntBASIC3.47□□□□□ -1.85
EPHB3P54753 AC091932.3-201ENST00000624223 323 ntBASIC3.47□□□□□ -1.85
EPHB3P54753 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
EPHB3P54753 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
EPHB3P54753 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
EPHB3P54753 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
EPHB3P54753 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
EPHB3P54753 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
EPHB3P54753 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
EPHB3P54753 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
EPHB3P54753 Y_RNA.179-201ENST00000363844 90 ntBASIC3.46□□□□□ -1.86
EPHB3P54753 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
EPHB3P54753 MIR493-201ENST00000385254 89 ntBASIC3.46□□□□□ -1.86
EPHB3P54753 SNORA40-201ENST00000388090 126 ntBASIC3.46□□□□□ -1.86
EPHB3P54753 EBAG9P1-201ENST00000418955 543 ntBASIC3.46□□□□□ -1.86
EPHB3P54753 HMGN2P30-201ENST00000423237 256 ntBASIC3.46□□□□□ -1.86
EPHB3P54753 AC125238.1-201ENST00000448842 249 ntBASIC3.46□□□□□ -1.86
EPHB3P54753 HMGB3P8-201ENST00000449709 577 ntBASIC3.46□□□□□ -1.86
EPHB3P54753 AC007215.1-201ENST00000464893 276 ntBASIC3.46□□□□□ -1.86
EPHB3P54753 AC114982.1-201ENST00000469402 321 ntBASIC3.46□□□□□ -1.86
EPHB3P54753 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.46□□□□□ -1.86
EPHB3P54753 RNU6-155P-201ENST00000516347 100 ntBASIC3.46□□□□□ -1.86
EPHB3P54753 RNU6-1282P-201ENST00000516735 96 ntBASIC3.46□□□□□ -1.86
EPHB3P54753 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.46□□□□□ -1.86
EPHB3P54753 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.46□□□□□ -1.86
EPHB3P54753 MIR4325-201ENST00000583049 90 ntBASIC3.46□□□□□ -1.86
EPHB3P54753 AL162274.2-201ENST00000614406 332 ntBASIC3.46□□□□□ -1.86
EPHB3P54753 AC004467.1-201ENST00000615678 330 ntBASIC3.46□□□□□ -1.86
EPHB3P54753 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.46□□□□□ -1.86
EPHB3P54753 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.46□□□□□ -1.86
EPHB3P54753 AC099654.7-201ENST00000635788 2127 ntBASIC3.46□□□□□ -1.86
EPHB3P54753 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
EPHB3P54753 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
EPHB3P54753 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
EPHB3P54753 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.45□□□□□ -1.86
EPHB3P54753 RNU6-245P-201ENST00000384020 107 ntBASIC3.45□□□□□ -1.86
EPHB3P54753 RNU6-1310P-201ENST00000384153 107 ntBASIC3.45□□□□□ -1.86
EPHB3P54753 RNU6-793P-201ENST00000384233 104 ntBASIC3.45□□□□□ -1.86
EPHB3P54753 Y_RNA.498-201ENST00000384460 102 ntBASIC3.45□□□□□ -1.86
EPHB3P54753 RNU6-1197P-201ENST00000391183 107 ntBASIC3.45□□□□□ -1.86
EPHB3P54753 RNU6-381P-201ENST00000391259 108 ntBASIC3.45□□□□□ -1.86
EPHB3P54753 FTH1P15-201ENST00000406984 280 ntBASIC3.45□□□□□ -1.86
EPHB3P54753 AC012306.1-201ENST00000423267 114 ntBASIC3.45□□□□□ -1.86
EPHB3P54753 CR769767.1-201ENST00000436337 346 ntBASIC3.45□□□□□ -1.86
EPHB3P54753 Y_RNA.637-201ENST00000459424 114 ntBASIC3.45□□□□□ -1.86
EPHB3P54753 SNRPGP7-201ENST00000469016 106 ntBASIC3.45□□□□□ -1.86
EPHB3P54753 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.45□□□□□ -1.86
EPHB3P54753 RNA5SP272-201ENST00000516095 111 ntBASIC3.45□□□□□ -1.86
EPHB3P54753 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.45□□□□□ -1.86
EPHB3P54753 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.45□□□□□ -1.86
EPHB3P54753 AL359198.2-201ENST00000611836 194 ntBASIC3.45□□□□□ -1.86
EPHB3P54753 AL078604.3-201ENST00000615580 211 ntBASIC3.45□□□□□ -1.86
EPHB3P54753 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.45□□□□□ -1.86
EPHB3P54753 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.45□□□□□ -1.86
EPHB3P54753 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
EPHB3P54753 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
EPHB3P54753 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.44□□□□□ -1.86
EPHB3P54753 PWAR6-201ENST00000552334 4618 ntBASIC3.44□□□□□ -1.86
EPHB3P54753 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
EPHB3P54753 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
EPHB3P54753 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
EPHB3P54753 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
EPHB3P54753 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
EPHB3P54753 Y_RNA.127-201ENST00000363386 109 ntBASIC3.44□□□□□ -1.86
EPHB3P54753 RNU6-1285P-201ENST00000363480 105 ntBASIC3.44□□□□□ -1.86
EPHB3P54753 Y_RNA.261-201ENST00000364631 102 ntBASIC3.44□□□□□ -1.86
EPHB3P54753 MIR634-201ENST00000385208 97 ntBASIC3.44□□□□□ -1.86
EPHB3P54753 MIR888-201ENST00000401186 77 ntBASIC3.44□□□□□ -1.86
EPHB3P54753 AC009963.1-201ENST00000417265 157 ntBASIC3.44□□□□□ -1.86
EPHB3P54753 NDUFB4P6-201ENST00000436819 366 ntBASIC3.44□□□□□ -1.86
EPHB3P54753 AC244670.1-201ENST00000436879 112 ntBASIC3.44□□□□□ -1.86
EPHB3P54753 RPL27AP5-201ENST00000469428 449 ntBASIC3.44□□□□□ -1.86
EPHB3P54753 AC091179.3-201ENST00000474761 144 ntBASIC3.44□□□□□ -1.86
EPHB3P54753 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.44□□□□□ -1.86
EPHB3P54753 AP002001.1-203ENST00000534002 267 ntBASIC3.44□□□□□ -1.86
EPHB3P54753 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
EPHB3P54753 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.44□□□□□ -1.86
EPHB3P54753 AC009127.3-201ENST00000570531 403 ntBASIC3.44□□□□□ -1.86
EPHB3P54753 MIR3186-201ENST00000577404 85 ntBASIC3.44□□□□□ -1.86
EPHB3P54753 MIR4738-201ENST00000579134 87 ntBASIC3.44□□□□□ -1.86
EPHB3P54753 AL356575.1-201ENST00000603008 283 ntBASIC3.44□□□□□ -1.86
EPHB3P54753 uc_338.1-201ENST00000612113 180 ntBASIC3.44□□□□□ -1.86
EPHB3P54753 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.44□□□□□ -1.86
EPHB3P54753 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.44□□□□□ -1.86
EPHB3P54753 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
EPHB3P54753 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
EPHB3P54753 AF117829.1-206ENST00000621883 3802 ntBASIC3.43□□□□□ -1.86
EPHB3P54753 CUL1P1-201ENST00000509510 2425 ntBASIC3.43□□□□□ -1.86
EPHB3P54753 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
EPHB3P54753 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
EPHB3P54753 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.43□□□□□ -1.86
EPHB3P54753 RNU6-799P-201ENST00000363567 107 ntBASIC3.43□□□□□ -1.86
EPHB3P54753 Y_RNA.218-201ENST00000364218 104 ntBASIC3.43□□□□□ -1.86
EPHB3P54753 AL512633.1-201ENST00000399931 655 ntBASIC3.43□□□□□ -1.86
EPHB3P54753 AL035461.1-201ENST00000421490 332 ntBASIC3.43□□□□□ -1.86
EPHB3P54753 ARF4P2-201ENST00000430209 526 ntBASIC3.43□□□□□ -1.86
EPHB3P54753 AL137159.1-201ENST00000452808 512 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 201.4 ms