Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.95□□□□□ -1.78
NFKB1P19838 AL500522.2-201ENST00000448562 343 ntBASIC3.95□□□□□ -1.78
NFKB1P19838 RNA5SP310-201ENST00000459084 116 ntBASIC3.95□□□□□ -1.78
NFKB1P19838 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.95□□□□□ -1.78
NFKB1P19838 AC026402.1-201ENST00000513642 170 ntBASIC3.95□□□□□ -1.78
NFKB1P19838 SNORA70.12-201ENST00000516084 153 ntBASIC3.95□□□□□ -1.78
NFKB1P19838 RN7SKP179-201ENST00000516126 217 ntBASIC3.95□□□□□ -1.78
NFKB1P19838 RNU6-561P-201ENST00000516222 102 ntBASIC3.95□□□□□ -1.78
NFKB1P19838 TOMM20P2-201ENST00000540082 421 ntBASIC3.95□□□□□ -1.78
NFKB1P19838 AL360157.1-201ENST00000565962 87 ntBASIC3.95□□□□□ -1.78
NFKB1P19838 AL137843.1-201ENST00000605078 385 ntBASIC3.95□□□□□ -1.78
NFKB1P19838 AC025754.2-201ENST00000606491 432 ntBASIC3.95□□□□□ -1.78
NFKB1P19838 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.95□□□□□ -1.78
NFKB1P19838 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.95□□□□□ -1.78
NFKB1P19838 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
NFKB1P19838 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.95□□□□□ -1.78
NFKB1P19838 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NFKB1P19838 MIR367-201ENST00000362299 68 ntBASIC3.94□□□□□ -1.78
NFKB1P19838 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
NFKB1P19838 Y_RNA.393-201ENST00000383936 102 ntBASIC3.94□□□□□ -1.78
NFKB1P19838 RPL23AP82-202ENST00000427528 469 ntBASIC3.94□□□□□ -1.78
NFKB1P19838 AC145146.1-201ENST00000496370 254 ntBASIC3.94□□□□□ -1.78
NFKB1P19838 PDCD5P2-201ENST00000507570 312 ntBASIC3.94□□□□□ -1.78
NFKB1P19838 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.94□□□□□ -1.78
NFKB1P19838 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.94□□□□□ -1.78
NFKB1P19838 AC012493.2-201ENST00000595083 291 ntBASIC3.94□□□□□ -1.78
NFKB1P19838 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.94□□□□□ -1.78
NFKB1P19838 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.94□□□□□ -1.78
NFKB1P19838 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
NFKB1P19838 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.94□□□□□ -1.78
NFKB1P19838 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
NFKB1P19838 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.94□□□□□ -1.78
NFKB1P19838 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
NFKB1P19838 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NFKB1P19838 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NFKB1P19838 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NFKB1P19838 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NFKB1P19838 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NFKB1P19838 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.93□□□□□ -1.78
NFKB1P19838 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.93□□□□□ -1.78
NFKB1P19838 SNORD114-19-201ENST00000363072 75 ntBASIC3.93□□□□□ -1.78
NFKB1P19838 RNU6-1180P-201ENST00000364935 107 ntBASIC3.93□□□□□ -1.78
NFKB1P19838 RNA5SP283-201ENST00000365604 119 ntBASIC3.93□□□□□ -1.78
NFKB1P19838 AP002088.1-201ENST00000382740 395 ntBASIC3.93□□□□□ -1.78
NFKB1P19838 MIR199A2-201ENST00000385289 110 ntBASIC3.93□□□□□ -1.78
NFKB1P19838 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
NFKB1P19838 RNU6-1064P-201ENST00000410626 104 ntBASIC3.93□□□□□ -1.78
NFKB1P19838 RN7SKP27-201ENST00000410684 333 ntBASIC3.93□□□□□ -1.78
NFKB1P19838 RPS27P1-201ENST00000450552 247 ntBASIC3.93□□□□□ -1.78
NFKB1P19838 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.93□□□□□ -1.78
NFKB1P19838 RNU2-44P-201ENST00000516795 194 ntBASIC3.93□□□□□ -1.78
NFKB1P19838 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.93□□□□□ -1.78
NFKB1P19838 PARP1P2-201ENST00000556806 195 ntBASIC3.93□□□□□ -1.78
NFKB1P19838 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.93□□□□□ -1.78
NFKB1P19838 HSPE1P7-201ENST00000604681 321 ntBASIC3.93□□□□□ -1.78
NFKB1P19838 ZYXP1-201ENST00000617638 118 ntBASIC3.93□□□□□ -1.78
NFKB1P19838 AL136164.4-201ENST00000625013 2135 ntBASIC3.93□□□□□ -1.78
NFKB1P19838 RNA5SP196-201ENST00000625967 102 ntBASIC3.93□□□□□ -1.78
NFKB1P19838 AL672296.1-201ENST00000427780 2158 ntBASIC3.93□□□□□ -1.78
NFKB1P19838 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.93□□□□□ -1.78
NFKB1P19838 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
NFKB1P19838 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.93□□□□□ -1.78
NFKB1P19838 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NFKB1P19838 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.93□□□□□ -1.78
NFKB1P19838 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.93□□□□□ -1.78
NFKB1P19838 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NFKB1P19838 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.92□□□□□ -1.78
NFKB1P19838 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NFKB1P19838 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NFKB1P19838 AL391516.1-201ENST00000554380 2449 ntBASIC3.92□□□□□ -1.78
NFKB1P19838 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
NFKB1P19838 SNORA63.4-201ENST00000362763 126 ntBASIC3.92□□□□□ -1.78
NFKB1P19838 Y_RNA.251-201ENST00000364551 99 ntBASIC3.92□□□□□ -1.78
NFKB1P19838 Y_RNA.521-201ENST00000384560 114 ntBASIC3.92□□□□□ -1.78
NFKB1P19838 RNU6-429P-201ENST00000384582 108 ntBASIC3.92□□□□□ -1.78
NFKB1P19838 RNU4-43P-201ENST00000410628 137 ntBASIC3.92□□□□□ -1.78
NFKB1P19838 AC245291.1-201ENST00000419501 328 ntBASIC3.92□□□□□ -1.78
NFKB1P19838 AL139281.1-201ENST00000422120 335 ntBASIC3.92□□□□□ -1.78
NFKB1P19838 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.92□□□□□ -1.78
NFKB1P19838 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.92□□□□□ -1.78
NFKB1P19838 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.92□□□□□ -1.78
NFKB1P19838 RPS3P1-201ENST00000456781 192 ntBASIC3.92□□□□□ -1.78
NFKB1P19838 AL441985.1-201ENST00000457727 251 ntBASIC3.92□□□□□ -1.78
NFKB1P19838 snoU13.28-201ENST00000459235 104 ntBASIC3.92□□□□□ -1.78
NFKB1P19838 RAC1P5-201ENST00000512182 576 ntBASIC3.92□□□□□ -1.78
NFKB1P19838 RNU2-56P-201ENST00000516826 190 ntBASIC3.92□□□□□ -1.78
NFKB1P19838 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.92□□□□□ -1.78
NFKB1P19838 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.92□□□□□ -1.78
NFKB1P19838 CYCSP26-201ENST00000534107 320 ntBASIC3.92□□□□□ -1.78
NFKB1P19838 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.92□□□□□ -1.78
NFKB1P19838 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.92□□□□□ -1.78
NFKB1P19838 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NFKB1P19838 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.92□□□□□ -1.78
NFKB1P19838 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NFKB1P19838 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.92□□□□□ -1.78
NFKB1P19838 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
NFKB1P19838 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.91□□□□□ -1.78
NFKB1P19838 RNA5SP97-201ENST00000365006 84 ntBASIC3.91□□□□□ -1.78
NFKB1P19838 RNY4P18-201ENST00000391107 89 ntBASIC3.91□□□□□ -1.78
NFKB1P19838 HSPE1P13-201ENST00000451143 297 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 241.4 ms