Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 SNORA25.17-201ENST00000517184 124 ntBASIC1.62□□□□□ -2.15
NPAS2Q99743 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.62□□□□□ -2.15
NPAS2Q99743 AC104383.1-201ENST00000530297 370 ntBASIC1.62□□□□□ -2.15
NPAS2Q99743 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.62□□□□□ -2.15
NPAS2Q99743 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.62□□□□□ -2.15
NPAS2Q99743 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.62□□□□□ -2.15
NPAS2Q99743 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.62□□□□□ -2.15
NPAS2Q99743 AP001330.5-201ENST00000607176 411 ntBASIC1.62□□□□□ -2.15
NPAS2Q99743 uc_338.34-201ENST00000617467 174 ntBASIC1.62□□□□□ -2.15
NPAS2Q99743 AC124864.2-201ENST00000624736 186 ntBASIC1.62□□□□□ -2.15
NPAS2Q99743 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
NPAS2Q99743 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
NPAS2Q99743 Y_RNA.4-201ENST00000362333 112 ntBASIC1.61□□□□□ -2.15
NPAS2Q99743 RNA5SP493-201ENST00000364115 91 ntBASIC1.61□□□□□ -2.15
NPAS2Q99743 RNU6-234P-201ENST00000365229 104 ntBASIC1.61□□□□□ -2.15
NPAS2Q99743 Y_RNA.332-201ENST00000365271 113 ntBASIC1.61□□□□□ -2.15
NPAS2Q99743 Y_RNA.372-201ENST00000365599 102 ntBASIC1.61□□□□□ -2.15
NPAS2Q99743 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.61□□□□□ -2.15
NPAS2Q99743 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
NPAS2Q99743 SNORD37.1-201ENST00000390968 65 ntBASIC1.61□□□□□ -2.15
NPAS2Q99743 AC078809.1-201ENST00000427601 140 ntBASIC1.61□□□□□ -2.15
NPAS2Q99743 AC108667.1-201ENST00000428618 249 ntBASIC1.61□□□□□ -2.15
NPAS2Q99743 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.61□□□□□ -2.15
NPAS2Q99743 AC244670.1-201ENST00000436879 112 ntBASIC1.61□□□□□ -2.15
NPAS2Q99743 AL121601.2-201ENST00000438019 707 ntBASIC1.61□□□□□ -2.15
NPAS2Q99743 MTCO2P7-201ENST00000446518 666 ntBASIC1.61□□□□□ -2.15
NPAS2Q99743 RNU1-131P-201ENST00000458943 161 ntBASIC1.61□□□□□ -2.15
NPAS2Q99743 SRRM1P2-201ENST00000464531 1192 ntBASIC1.61□□□□□ -2.15
NPAS2Q99743 Y_RNA.704-201ENST00000516851 102 ntBASIC1.61□□□□□ -2.15
NPAS2Q99743 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.61□□□□□ -2.15
NPAS2Q99743 AP003034.1-201ENST00000534621 422 ntBASIC1.61□□□□□ -2.15
NPAS2Q99743 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.61□□□□□ -2.15
NPAS2Q99743 AC245505.1-201ENST00000556398 224 ntBASIC1.61□□□□□ -2.15
NPAS2Q99743 MTCO3P23-201ENST00000561363 289 ntBASIC1.61□□□□□ -2.15
NPAS2Q99743 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.61□□□□□ -2.15
NPAS2Q99743 MIR4255-201ENST00000579351 72 ntBASIC1.61□□□□□ -2.15
NPAS2Q99743 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.61□□□□□ -2.15
NPAS2Q99743 MIR3941-201ENST00000582572 103 ntBASIC1.61□□□□□ -2.15
NPAS2Q99743 AC092954.2-201ENST00000609103 430 ntBASIC1.61□□□□□ -2.15
NPAS2Q99743 HULC.1-201ENST00000612720 240 ntBASIC1.61□□□□□ -2.15
NPAS2Q99743 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.61□□□□□ -2.15
NPAS2Q99743 RNU6-428P-201ENST00000362942 107 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 RNU4-56P-201ENST00000364700 142 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 RNU4-20P-201ENST00000365601 151 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 SNORA69-201ENST00000383895 132 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 RNU6-26P-201ENST00000383985 107 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 RNU6-692P-201ENST00000384496 107 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
NPAS2Q99743 MTCYBP2-201ENST00000407745 171 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 RNA5SP100-201ENST00000410903 110 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 RNA5SP59-201ENST00000410922 110 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 RNA5SP247-201ENST00000411181 105 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 RPS20P15-201ENST00000412792 311 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 RPL23AP36-201ENST00000413895 458 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 MTCO3P41-201ENST00000414801 328 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.6□□□□□ -2.15
NPAS2Q99743 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.6□□□□□ -2.15
NPAS2Q99743 AL031274.1-201ENST00000450334 232 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 AC083798.1-201ENST00000472671 131 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.6□□□□□ -2.15
NPAS2Q99743 AC005741.1-201ENST00000511094 432 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 RNA5SP401-201ENST00000515920 127 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.6□□□□□ -2.15
NPAS2Q99743 MTND4P7-201ENST00000523876 130 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 AC022880.1-201ENST00000534017 973 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 AL118558.2-201ENST00000556294 238 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.6□□□□□ -2.15
NPAS2Q99743 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.6□□□□□ -2.15
NPAS2Q99743 MIR4424-201ENST00000585257 86 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 AC005786.1-201ENST00000588553 154 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 AC023043.2-201ENST00000589678 1026 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 AF250324.2-201ENST00000608299 610 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 AL359880.1-201ENST00000621879 266 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.6□□□□□ -2.15
NPAS2Q99743 RNU6-661P-201ENST00000362409 107 ntBASIC1.59□□□□□ -2.15
NPAS2Q99743 RNU6-1085P-201ENST00000363576 107 ntBASIC1.59□□□□□ -2.15
NPAS2Q99743 RNU6-457P-201ENST00000363999 107 ntBASIC1.59□□□□□ -2.15
NPAS2Q99743 Y_RNA.399-201ENST00000383955 105 ntBASIC1.59□□□□□ -2.15
NPAS2Q99743 MIR30A-201ENST00000385092 71 ntBASIC1.59□□□□□ -2.15
NPAS2Q99743 RNA5SP219-201ENST00000390940 113 ntBASIC1.59□□□□□ -2.15
NPAS2Q99743 SNORA26.3-201ENST00000391119 136 ntBASIC1.59□□□□□ -2.15
NPAS2Q99743 AL117339.3-201ENST00000418733 162 ntBASIC1.59□□□□□ -2.15
NPAS2Q99743 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.59□□□□□ -2.15
NPAS2Q99743 HMGN2P18-201ENST00000450680 270 ntBASIC1.59□□□□□ -2.15
NPAS2Q99743 RNU7-167P-201ENST00000459160 62 ntBASIC1.59□□□□□ -2.15
NPAS2Q99743 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.59□□□□□ -2.15
NPAS2Q99743 AC108729.3-201ENST00000513484 108 ntBASIC1.59□□□□□ -2.15
NPAS2Q99743 RNVU1-2-201ENST00000516326 135 ntBASIC1.59□□□□□ -2.15
NPAS2Q99743 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.59□□□□□ -2.15
NPAS2Q99743 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.59□□□□□ -2.15
NPAS2Q99743 U2.17-201ENST00000611454 95 ntBASIC1.59□□□□□ -2.15
NPAS2Q99743 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
NPAS2Q99743 AL590240.4-201ENST00000616908 390 ntBASIC1.59□□□□□ -2.15
NPAS2Q99743 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
NPAS2Q99743 LINC02555-201ENST00000563933 1951 ntBASIC1.58□□□□□ -2.16
NPAS2Q99743 AC092268.1-201ENST00000342691 405 ntBASIC1.58□□□□□ -2.16
NPAS2Q99743 RNU6-1322P-201ENST00000364309 107 ntBASIC1.58□□□□□ -2.16
NPAS2Q99743 SNORD32A-201ENST00000364805 84 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms