Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.82□□□□□ -1.96
SNHG28P0DPA3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.82□□□□□ -1.96
SNHG28P0DPA3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SNHG28P0DPA3 AL391987.6-201ENST00000305671 199 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SNHG28P0DPA3 Y_RNA.297-201ENST00000364950 91 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 Y_RNA.358-201ENST00000365491 99 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 Y_RNA.405-201ENST00000383979 100 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 Y_RNA.451-201ENST00000384200 100 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 Y_RNA.524-201ENST00000384564 100 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 Y_RNA.561-201ENST00000384694 100 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 RPL21P75-201ENST00000396599 483 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 RPL21P28-201ENST00000401418 483 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.82□□□□□ -1.96
SNHG28P0DPA3 RNA5SP344-201ENST00000411081 104 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 AL590556.1-201ENST00000423231 483 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 Z82188.1-201ENST00000436709 154 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 AC013470.1-201ENST00000453438 462 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 RPL21P39-201ENST00000463605 483 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 AC087190.1-201ENST00000484462 480 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 AC107032.1-201ENST00000485945 480 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 AC132942.1-201ENST00000486753 483 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 RPS15AP34-201ENST00000487776 387 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 AC093591.1-201ENST00000491435 481 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 RPL21P16-201ENST00000495531 483 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 AC234781.5-201ENST00000508429 271 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 SNORA31.1-201ENST00000515993 133 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 SNORA31.5-201ENST00000516190 133 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 RNU6-911P-201ENST00000516523 104 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 RPS29P30-201ENST00000600975 111 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 AL355877.2-201ENST00000603670 358 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 MIR8076-201ENST00000611401 83 ntBASIC2.82□□□□□ -1.96
SNHG28P0DPA3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.82□□□□□ -1.96
SNHG28P0DPA3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.82□□□□□ -1.96
SNHG28P0DPA3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SNHG28P0DPA3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.82□□□□□ -1.96
SNHG28P0DPA3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.81□□□□□ -1.96
SNHG28P0DPA3 AC090740.1-201ENST00000623193 2262 ntBASIC2.81□□□□□ -1.96
SNHG28P0DPA3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
SNHG28P0DPA3 MIR335-201ENST00000362173 94 ntBASIC2.81□□□□□ -1.96
SNHG28P0DPA3 Y_RNA.27-201ENST00000362540 103 ntBASIC2.81□□□□□ -1.96
SNHG28P0DPA3 RNU1-76P-201ENST00000362903 159 ntBASIC2.81□□□□□ -1.96
SNHG28P0DPA3 Y_RNA.76-201ENST00000362931 109 ntBASIC2.81□□□□□ -1.96
SNHG28P0DPA3 Y_RNA.143-201ENST00000363520 106 ntBASIC2.81□□□□□ -1.96
SNHG28P0DPA3 RNU6-280P-201ENST00000364145 104 ntBASIC2.81□□□□□ -1.96
SNHG28P0DPA3 MIR1250-201ENST00000408098 113 ntBASIC2.81□□□□□ -1.96
SNHG28P0DPA3 RN7SKP123-201ENST00000410732 291 ntBASIC2.81□□□□□ -1.96
SNHG28P0DPA3 MTCO3P19-201ENST00000415864 321 ntBASIC2.81□□□□□ -1.96
SNHG28P0DPA3 EEF1B2P7-201ENST00000451177 676 ntBASIC2.81□□□□□ -1.96
SNHG28P0DPA3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.81□□□□□ -1.96
SNHG28P0DPA3 RPL30P10-201ENST00000488148 337 ntBASIC2.81□□□□□ -1.96
SNHG28P0DPA3 RN7SL636P-201ENST00000497504 294 ntBASIC2.81□□□□□ -1.96
SNHG28P0DPA3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.81□□□□□ -1.96
SNHG28P0DPA3 HMGB1P22-201ENST00000505315 124 ntBASIC2.81□□□□□ -1.96
SNHG28P0DPA3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.81□□□□□ -1.96
SNHG28P0DPA3 AL359273.1-201ENST00000510918 627 ntBASIC2.81□□□□□ -1.96
SNHG28P0DPA3 RNU6-1338P-201ENST00000516328 91 ntBASIC2.81□□□□□ -1.96
SNHG28P0DPA3 RNU6-182P-201ENST00000516970 105 ntBASIC2.81□□□□□ -1.96
SNHG28P0DPA3 AC025755.1-201ENST00000521306 278 ntBASIC2.81□□□□□ -1.96
SNHG28P0DPA3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.81□□□□□ -1.96
SNHG28P0DPA3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.81□□□□□ -1.96
SNHG28P0DPA3 AL137100.2-201ENST00000555786 315 ntBASIC2.81□□□□□ -1.96
SNHG28P0DPA3 AL161629.2-201ENST00000615347 275 ntBASIC2.81□□□□□ -1.96
SNHG28P0DPA3 AC011476.5-201ENST00000615594 130 ntBASIC2.81□□□□□ -1.96
SNHG28P0DPA3 AC090132.2-201ENST00000615881 347 ntBASIC2.81□□□□□ -1.96
SNHG28P0DPA3 AL590808.1-201ENST00000618696 141 ntBASIC2.81□□□□□ -1.96
SNHG28P0DPA3 AL161431.1-201ENST00000618966 4205 ntBASIC2.81□□□□□ -1.96
SNHG28P0DPA3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.81□□□□□ -1.96
SNHG28P0DPA3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SNHG28P0DPA3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SNHG28P0DPA3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SNHG28P0DPA3 RNU6-301P-201ENST00000384277 107 ntBASIC2.8□□□□□ -1.96
SNHG28P0DPA3 RNU6-933P-201ENST00000384424 107 ntBASIC2.8□□□□□ -1.96
SNHG28P0DPA3 Y_RNA.526-201ENST00000384572 110 ntBASIC2.8□□□□□ -1.96
SNHG28P0DPA3 SNORA12.2-201ENST00000391040 156 ntBASIC2.8□□□□□ -1.96
SNHG28P0DPA3 MIR190B-201ENST00000401119 79 ntBASIC2.8□□□□□ -1.96
SNHG28P0DPA3 AL079342.1-201ENST00000401460 267 ntBASIC2.8□□□□□ -1.96
SNHG28P0DPA3 AC007098.1-201ENST00000420122 367 ntBASIC2.8□□□□□ -1.96
SNHG28P0DPA3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.8□□□□□ -1.96
SNHG28P0DPA3 SNORD59.2-201ENST00000516873 68 ntBASIC2.8□□□□□ -1.96
SNHG28P0DPA3 RNU6-612P-201ENST00000516909 102 ntBASIC2.8□□□□□ -1.96
SNHG28P0DPA3 SCARNA24.2-201ENST00000516968 130 ntBASIC2.8□□□□□ -1.96
SNHG28P0DPA3 Y_RNA.713-201ENST00000517013 96 ntBASIC2.8□□□□□ -1.96
SNHG28P0DPA3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.8□□□□□ -1.96
SNHG28P0DPA3 AP002770.2-201ENST00000543613 532 ntBASIC2.8□□□□□ -1.96
SNHG28P0DPA3 AL442163.3-201ENST00000554110 156 ntBASIC2.8□□□□□ -1.96
SNHG28P0DPA3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.8□□□□□ -1.96
SNHG28P0DPA3 AC023824.2-201ENST00000566185 400 ntBASIC2.8□□□□□ -1.96
SNHG28P0DPA3 FAM60BP-201ENST00000578364 658 ntBASIC2.8□□□□□ -1.96
SNHG28P0DPA3 MIR4506-201ENST00000584693 77 ntBASIC2.8□□□□□ -1.96
SNHG28P0DPA3 AC067747.1-201ENST00000608026 250 ntBASIC2.8□□□□□ -1.96
SNHG28P0DPA3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.8□□□□□ -1.96
SNHG28P0DPA3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.79□□□□□ -1.96
SNHG28P0DPA3 Y_RNA.29-201ENST00000362570 113 ntBASIC2.79□□□□□ -1.96
SNHG28P0DPA3 Y_RNA.54-201ENST00000362766 105 ntBASIC2.79□□□□□ -1.96
SNHG28P0DPA3 RNU6-395P-201ENST00000365662 106 ntBASIC2.79□□□□□ -1.96
SNHG28P0DPA3 RNU6-166P-201ENST00000384371 107 ntBASIC2.79□□□□□ -1.96
SNHG28P0DPA3 MIR628-201ENST00000385229 95 ntBASIC2.79□□□□□ -1.96
SNHG28P0DPA3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms