Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
KLF4O43474 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
KLF4O43474 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.36□□□□□ -1.87
KLF4O43474 AC010615.1-201ENST00000594254 1764 ntBASIC3.36□□□□□ -1.87
KLF4O43474 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
KLF4O43474 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
KLF4O43474 Y_RNA.84-201ENST00000363011 104 ntBASIC3.36□□□□□ -1.87
KLF4O43474 RNU6-461P-201ENST00000364195 107 ntBASIC3.36□□□□□ -1.87
KLF4O43474 RNU6-1264P-201ENST00000383891 107 ntBASIC3.36□□□□□ -1.87
KLF4O43474 Y_RNA.415-201ENST00000384012 112 ntBASIC3.36□□□□□ -1.87
KLF4O43474 RNU6-472P-201ENST00000384299 107 ntBASIC3.36□□□□□ -1.87
KLF4O43474 Y_RNA.489-201ENST00000384410 101 ntBASIC3.36□□□□□ -1.87
KLF4O43474 SNORA53-201ENST00000391141 249 ntBASIC3.36□□□□□ -1.87
KLF4O43474 AL357075.1-201ENST00000404107 726 ntBASIC3.36□□□□□ -1.87
KLF4O43474 U3.39-201ENST00000408569 239 ntBASIC3.36□□□□□ -1.87
KLF4O43474 RNU6-1203P-201ENST00000410703 110 ntBASIC3.36□□□□□ -1.87
KLF4O43474 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.36□□□□□ -1.87
KLF4O43474 RAB28P5-201ENST00000427490 651 ntBASIC3.36□□□□□ -1.87
KLF4O43474 AC104332.2-201ENST00000429959 156 ntBASIC3.36□□□□□ -1.87
KLF4O43474 Z75741.1-201ENST00000446793 314 ntBASIC3.36□□□□□ -1.87
KLF4O43474 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.36□□□□□ -1.87
KLF4O43474 RNU7-14P-201ENST00000459331 62 ntBASIC3.36□□□□□ -1.87
KLF4O43474 AC114982.1-201ENST00000469402 321 ntBASIC3.36□□□□□ -1.87
KLF4O43474 RNU6-1098P-201ENST00000516772 96 ntBASIC3.36□□□□□ -1.87
KLF4O43474 AC022695.1-201ENST00000522089 237 ntBASIC3.36□□□□□ -1.87
KLF4O43474 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.36□□□□□ -1.87
KLF4O43474 DEFB131C-201ENST00000528817 165 ntBASIC3.36□□□□□ -1.87
KLF4O43474 AC006001.4-201ENST00000622243 395 ntBASIC3.36□□□□□ -1.87
KLF4O43474 MIR3674-201ENST00000636576 68 ntBASIC3.36□□□□□ -1.87
KLF4O43474 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
KLF4O43474 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KLF4O43474 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.35□□□□□ -1.87
KLF4O43474 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.35□□□□□ -1.87
KLF4O43474 RNA5SP119-201ENST00000362715 117 ntBASIC3.35□□□□□ -1.87
KLF4O43474 U3.8-201ENST00000363675 217 ntBASIC3.35□□□□□ -1.87
KLF4O43474 RNU6-944P-201ENST00000364023 107 ntBASIC3.35□□□□□ -1.87
KLF4O43474 RNU6-1175P-201ENST00000365200 107 ntBASIC3.35□□□□□ -1.87
KLF4O43474 RNU6-234P-201ENST00000365229 104 ntBASIC3.35□□□□□ -1.87
KLF4O43474 Y_RNA.483-201ENST00000384380 101 ntBASIC3.35□□□□□ -1.87
KLF4O43474 MT-TW-201ENST00000387382 68 ntBASIC3.35□□□□□ -1.87
KLF4O43474 AC006989.1-201ENST00000427212 131 ntBASIC3.35□□□□□ -1.87
KLF4O43474 RNU6-1132P-201ENST00000459214 107 ntBASIC3.35□□□□□ -1.87
KLF4O43474 AL133162.1-201ENST00000463228 453 ntBASIC3.35□□□□□ -1.87
KLF4O43474 SRIP1-201ENST00000489235 288 ntBASIC3.35□□□□□ -1.87
KLF4O43474 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.35□□□□□ -1.87
KLF4O43474 AC026403.1-201ENST00000518938 295 ntBASIC3.35□□□□□ -1.87
KLF4O43474 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.35□□□□□ -1.87
KLF4O43474 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.35□□□□□ -1.87
KLF4O43474 MIR4423-201ENST00000580922 80 ntBASIC3.35□□□□□ -1.87
KLF4O43474 MIR4753-201ENST00000585119 83 ntBASIC3.35□□□□□ -1.87
KLF4O43474 AC006380.1-201ENST00000603598 186 ntBASIC3.35□□□□□ -1.87
KLF4O43474 AC099778.2-201ENST00000610904 211 ntBASIC3.35□□□□□ -1.87
KLF4O43474 U7.8-201ENST00000619968 63 ntBASIC3.35□□□□□ -1.87
KLF4O43474 AC092628.2-201ENST00000622492 339 ntBASIC3.35□□□□□ -1.87
KLF4O43474 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.35□□□□□ -1.87
KLF4O43474 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KLF4O43474 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
KLF4O43474 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
KLF4O43474 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
KLF4O43474 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
KLF4O43474 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
KLF4O43474 AL391987.6-201ENST00000305671 199 ntBASIC3.34□□□□□ -1.87
KLF4O43474 RNU6-1305P-201ENST00000364353 104 ntBASIC3.34□□□□□ -1.87
KLF4O43474 SNORA5A-201ENST00000384111 134 ntBASIC3.34□□□□□ -1.87
KLF4O43474 Y_RNA.570-201ENST00000384750 101 ntBASIC3.34□□□□□ -1.87
KLF4O43474 MIR627-201ENST00000384979 97 ntBASIC3.34□□□□□ -1.87
KLF4O43474 MIR586-201ENST00000385035 97 ntBASIC3.34□□□□□ -1.87
KLF4O43474 MIR561-201ENST00000385216 97 ntBASIC3.34□□□□□ -1.87
KLF4O43474 RNU2-32P-201ENST00000411193 191 ntBASIC3.34□□□□□ -1.87
KLF4O43474 ELOCP21-201ENST00000412558 336 ntBASIC3.34□□□□□ -1.87
KLF4O43474 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.34□□□□□ -1.87
KLF4O43474 AL139247.1-201ENST00000422768 325 ntBASIC3.34□□□□□ -1.87
KLF4O43474 AC009969.1-201ENST00000438726 172 ntBASIC3.34□□□□□ -1.87
KLF4O43474 NDUFB4P10-201ENST00000452541 359 ntBASIC3.34□□□□□ -1.87
KLF4O43474 MTND4LP30-201ENST00000454092 297 ntBASIC3.34□□□□□ -1.87
KLF4O43474 SNORD127-201ENST00000458892 86 ntBASIC3.34□□□□□ -1.87
KLF4O43474 RPL39P38-201ENST00000467018 153 ntBASIC3.34□□□□□ -1.87
KLF4O43474 SNORA48.11-201ENST00000517015 89 ntBASIC3.34□□□□□ -1.87
KLF4O43474 AC008011.1-201ENST00000545989 227 ntBASIC3.34□□□□□ -1.87
KLF4O43474 AL034408.1-202ENST00000636088 415 ntBASIC3.34□□□□□ -1.87
KLF4O43474 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
KLF4O43474 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.34□□□□□ -1.88
KLF4O43474 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
KLF4O43474 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.34□□□□□ -1.88
KLF4O43474 Z83843.1-201ENST00000604070 3685 ntBASIC3.33□□□□□ -1.88
KLF4O43474 MTND5P6-201ENST00000422338 1798 ntBASIC3.33□□□□□ -1.88
KLF4O43474 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KLF4O43474 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
KLF4O43474 MIR335-201ENST00000362173 94 ntBASIC3.33□□□□□ -1.88
KLF4O43474 MIR208A-201ENST00000362287 71 ntBASIC3.33□□□□□ -1.88
KLF4O43474 snoU2_19.2-201ENST00000363024 80 ntBASIC3.33□□□□□ -1.88
KLF4O43474 Y_RNA.350-201ENST00000365409 98 ntBASIC3.33□□□□□ -1.88
KLF4O43474 SNORA70.4-201ENST00000365509 134 ntBASIC3.33□□□□□ -1.88
KLF4O43474 RNU6-438P-201ENST00000365561 103 ntBASIC3.33□□□□□ -1.88
KLF4O43474 MIR95-201ENST00000385072 81 ntBASIC3.33□□□□□ -1.88
KLF4O43474 AL357139.1-201ENST00000407792 426 ntBASIC3.33□□□□□ -1.88
KLF4O43474 AC004866.1-201ENST00000411748 78 ntBASIC3.33□□□□□ -1.88
KLF4O43474 AC093578.1-201ENST00000415219 368 ntBASIC3.33□□□□□ -1.88
KLF4O43474 TOMM22P2-201ENST00000430735 237 ntBASIC3.33□□□□□ -1.88
KLF4O43474 Z96811.1-201ENST00000445880 108 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 209.5 ms