Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
EPHB3P54753 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
EPHB3P54753 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
EPHB3P54753 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
EPHB3P54753 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
EPHB3P54753 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
EPHB3P54753 RNU6-449P-201ENST00000383914 107 ntBASIC3.6□□□□□ -1.83
EPHB3P54753 RNU6-142P-201ENST00000384019 107 ntBASIC3.6□□□□□ -1.83
EPHB3P54753 Y_RNA.571-201ENST00000384753 98 ntBASIC3.6□□□□□ -1.83
EPHB3P54753 Y_RNA.629-201ENST00000411368 105 ntBASIC3.6□□□□□ -1.83
EPHB3P54753 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.6□□□□□ -1.83
EPHB3P54753 Z82210.1-201ENST00000440037 231 ntBASIC3.6□□□□□ -1.83
EPHB3P54753 RPS29P31-201ENST00000446147 164 ntBASIC3.6□□□□□ -1.83
EPHB3P54753 AC009237.7-201ENST00000447357 229 ntBASIC3.6□□□□□ -1.83
EPHB3P54753 AC005042.3-201ENST00000453230 174 ntBASIC3.6□□□□□ -1.83
EPHB3P54753 AC084357.1-201ENST00000473404 255 ntBASIC3.6□□□□□ -1.83
EPHB3P54753 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.6□□□□□ -1.83
EPHB3P54753 RNU6-1183P-201ENST00000517054 60 ntBASIC3.6□□□□□ -1.83
EPHB3P54753 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.6□□□□□ -1.83
EPHB3P54753 MIR5571-201ENST00000577998 113 ntBASIC3.6□□□□□ -1.83
EPHB3P54753 AC022441.3-201ENST00000605737 136 ntBASIC3.6□□□□□ -1.83
EPHB3P54753 AC005828.6-201ENST00000606610 232 ntBASIC3.6□□□□□ -1.83
EPHB3P54753 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.6□□□□□ -1.83
EPHB3P54753 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
EPHB3P54753 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.6□□□□□ -1.83
EPHB3P54753 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
EPHB3P54753 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
EPHB3P54753 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
EPHB3P54753 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
EPHB3P54753 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
EPHB3P54753 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
EPHB3P54753 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.59□□□□□ -1.83
EPHB3P54753 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.59□□□□□ -1.83
EPHB3P54753 AC002546.1-201ENST00000588041 2504 ntBASIC3.59□□□□□ -1.83
EPHB3P54753 Y_RNA.488-201ENST00000384403 102 ntBASIC3.59□□□□□ -1.83
EPHB3P54753 Y_RNA.586-201ENST00000391146 98 ntBASIC3.59□□□□□ -1.83
EPHB3P54753 AC006028.1-201ENST00000438379 402 ntBASIC3.59□□□□□ -1.83
EPHB3P54753 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.59□□□□□ -1.83
EPHB3P54753 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.59□□□□□ -1.83
EPHB3P54753 SNORA70.16-201ENST00000516390 95 ntBASIC3.59□□□□□ -1.83
EPHB3P54753 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
EPHB3P54753 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.59□□□□□ -1.83
EPHB3P54753 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.59□□□□□ -1.83
EPHB3P54753 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.59□□□□□ -1.83
EPHB3P54753 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.59□□□□□ -1.83
EPHB3P54753 AL133393.1-201ENST00000603277 287 ntBASIC3.59□□□□□ -1.83
EPHB3P54753 MIR7112-201ENST00000616126 65 ntBASIC3.59□□□□□ -1.83
EPHB3P54753 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.59□□□□□ -1.83
EPHB3P54753 AC091895.1-201ENST00000624494 256 ntBASIC3.59□□□□□ -1.83
EPHB3P54753 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.59□□□□□ -1.83
EPHB3P54753 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
EPHB3P54753 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
EPHB3P54753 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
EPHB3P54753 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.84
EPHB3P54753 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.84
EPHB3P54753 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
EPHB3P54753 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
EPHB3P54753 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
EPHB3P54753 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
EPHB3P54753 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
EPHB3P54753 RNU6-312P-201ENST00000364629 107 ntBASIC3.58□□□□□ -1.84
EPHB3P54753 RNU4-56P-201ENST00000364700 142 ntBASIC3.58□□□□□ -1.84
EPHB3P54753 RNU6-211P-201ENST00000384047 107 ntBASIC3.58□□□□□ -1.84
EPHB3P54753 RNU6-1245P-201ENST00000411130 106 ntBASIC3.58□□□□□ -1.84
EPHB3P54753 AC024067.1-201ENST00000426199 223 ntBASIC3.58□□□□□ -1.84
EPHB3P54753 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.58□□□□□ -1.84
EPHB3P54753 AC005840.1-201ENST00000498412 377 ntBASIC3.58□□□□□ -1.84
EPHB3P54753 RNU6-1198P-201ENST00000516904 67 ntBASIC3.58□□□□□ -1.84
EPHB3P54753 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.58□□□□□ -1.84
EPHB3P54753 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.58□□□□□ -1.84
EPHB3P54753 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.58□□□□□ -1.84
EPHB3P54753 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.58□□□□□ -1.84
EPHB3P54753 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.58□□□□□ -1.84
EPHB3P54753 AL138963.2-201ENST00000605137 226 ntBASIC3.58□□□□□ -1.84
EPHB3P54753 YPEL5P2-201ENST00000605553 359 ntBASIC3.58□□□□□ -1.84
EPHB3P54753 AL365222.1-201ENST00000614661 98 ntBASIC3.58□□□□□ -1.84
EPHB3P54753 U7.8-201ENST00000619968 63 ntBASIC3.58□□□□□ -1.84
EPHB3P54753 AC024581.2-201ENST00000619986 252 ntBASIC3.58□□□□□ -1.84
EPHB3P54753 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.58□□□□□ -1.84
EPHB3P54753 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.58□□□□□ -1.84
EPHB3P54753 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
EPHB3P54753 ZNF204P-201ENST00000416749 2397 ntBASIC3.58□□□□□ -1.84
EPHB3P54753 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
EPHB3P54753 Y_RNA.23-201ENST00000362496 106 ntBASIC3.57□□□□□ -1.84
EPHB3P54753 Y_RNA.215-201ENST00000364204 112 ntBASIC3.57□□□□□ -1.84
EPHB3P54753 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.57□□□□□ -1.84
EPHB3P54753 MIR487A-201ENST00000385009 80 ntBASIC3.57□□□□□ -1.84
EPHB3P54753 AP000567.1-201ENST00000406413 156 ntBASIC3.57□□□□□ -1.84
EPHB3P54753 Z92545.1-201ENST00000411782 234 ntBASIC3.57□□□□□ -1.84
EPHB3P54753 AL358075.3-201ENST00000426289 226 ntBASIC3.57□□□□□ -1.84
EPHB3P54753 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.57□□□□□ -1.84
EPHB3P54753 AC068647.1-201ENST00000489539 2265 ntBASIC3.57□□□□□ -1.84
EPHB3P54753 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.57□□□□□ -1.84
EPHB3P54753 RNU6-191P-201ENST00000516295 94 ntBASIC3.57□□□□□ -1.84
EPHB3P54753 SUMO2P18-201ENST00000518873 252 ntBASIC3.57□□□□□ -1.84
EPHB3P54753 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.57□□□□□ -1.84
EPHB3P54753 AC026333.2-201ENST00000542164 106 ntBASIC3.57□□□□□ -1.84
EPHB3P54753 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.57□□□□□ -1.84
EPHB3P54753 LINC00933-203ENST00000559812 219 ntBASIC3.57□□□□□ -1.84
EPHB3P54753 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms