Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 SNORA46.1-201ENST00000391069 153 ntBASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 Z98941.1-201ENST00000407764 100 ntBASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 RPL19P1-201ENST00000411635 428 ntBASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 COX6CP10-201ENST00000416832 224 ntBASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 AL714022.1-201ENST00000439897 151 ntBASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 AL392103.1-201ENST00000447000 198 ntBASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 UQCRBP2-201ENST00000447827 297 ntBASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 RNU6-625P-201ENST00000459412 107 ntBASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 AIG1P1-201ENST00000503376 148 ntBASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 RAC1P2-201ENST00000511164 579 ntBASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 AC074133.1-201ENST00000515696 183 ntBASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 SNORA27.4-201ENST00000516650 95 ntBASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 SNORD19.2-201ENST00000516978 73 ntBASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 RPL21P9-201ENST00000556149 474 ntBASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 AC055872.1-201ENST00000570978 278 ntBASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 MIR3136-201ENST00000583498 78 ntBASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 MIR4282-201ENST00000583613 67 ntBASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 MZT1P2-201ENST00000604387 248 ntBASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 AL137849.1-201ENST00000604767 169 ntBASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 BX322639.1-202ENST00000423987 2213 ntBASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 AC006504.1-201ENST00000562493 3666 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 Y_RNA.82-201ENST00000363000 102 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 Y_RNA.92-201ENST00000363043 102 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 RNU6-799P-201ENST00000363567 107 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 RNU6-1020P-201ENST00000363684 107 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 Y_RNA.235-201ENST00000364412 102 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 RNU4-56P-201ENST00000364700 142 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 Y_RNA.306-201ENST00000365015 102 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 SNORA72.2-201ENST00000365028 127 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 Y_RNA.312-201ENST00000365089 102 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 Y_RNA.322-201ENST00000365151 102 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 RNU6-662P-201ENST00000384253 104 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 AL133475.1-201ENST00000404414 305 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 CYCSP48-201ENST00000417124 323 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 HMGN2P20-201ENST00000437531 273 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 AC005042.3-201ENST00000453230 174 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 AC010099.1-201ENST00000455434 375 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 Y_RNA.650-201ENST00000459002 102 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 AL133162.1-201ENST00000463228 453 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 RNA5SP208-201ENST00000516156 78 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 Y_RNA.777-201ENST00000516982 102 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 AC087441.2-201ENST00000529141 262 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 AC018448.1-201ENST00000552843 316 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 MIR5187-201ENST00000583479 76 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 Y_RNA.771-201ENST00000598668 102 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 AL356575.1-201ENST00000603008 283 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 AC011921.3-201ENST00000605540 361 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 AC022441.3-201ENST00000605737 136 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 SNORA62.6-201ENST00000606322 83 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 Y_RNA.789-201ENST00000622480 102 ntBASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PTCHD1Q96NR3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 RNU6-682P-201ENST00000363843 106 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 SNORA62.3-201ENST00000365110 153 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 RNU6-245P-201ENST00000384020 107 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 RNU6-793P-201ENST00000384233 104 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 RNU6-1289P-201ENST00000384431 106 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 RNU6-748P-201ENST00000384648 107 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 U8.11-201ENST00000384699 133 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 U8.12-201ENST00000384701 133 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 U3.26-201ENST00000391236 204 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 MIR208B-201ENST00000401172 77 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 SNORA11-201ENST00000408789 128 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 AC245291.1-201ENST00000419501 328 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 AC017083.1-201ENST00000428093 483 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 U8.18-201ENST00000459285 133 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 Y_RNA.638-201ENST00000459374 113 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 TRBV12-2-201ENST00000489763 344 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 RPL7P47-201ENST00000497299 556 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 RNU5F-2P-201ENST00000516066 82 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 AP000867.2-201ENST00000532468 320 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 AC074050.1-201ENST00000563247 211 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 MIR1254-2-201ENST00000579553 63 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 MIR486-1-201ENST00000612171 68 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 AL121772.2-201ENST00000614331 297 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 CR392039.5-201ENST00000623201 510 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 AL353746.1-201ENST00000566293 6881 ntBASIC3.52□□□□□ -1.85
PTCHD1Q96NR3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 214.5 ms