Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
LRRC28Q86X40 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
LRRC28Q86X40 SNORD114-27-201ENST00000363766 70 ntBASIC0.83□□□□□ -2.28
LRRC28Q86X40 RNU1-93P-201ENST00000364704 169 ntBASIC0.83□□□□□ -2.28
LRRC28Q86X40 RNU5E-7P-201ENST00000365290 117 ntBASIC0.83□□□□□ -2.28
LRRC28Q86X40 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.83□□□□□ -2.28
LRRC28Q86X40 MIR544A-201ENST00000384855 91 ntBASIC0.83□□□□□ -2.28
LRRC28Q86X40 SNORA12.2-201ENST00000391040 156 ntBASIC0.83□□□□□ -2.28
LRRC28Q86X40 MIR1287-201ENST00000408492 90 ntBASIC0.83□□□□□ -2.28
LRRC28Q86X40 SSR1P2-201ENST00000415208 787 ntBASIC0.83□□□□□ -2.28
LRRC28Q86X40 AC123900.1-201ENST00000420390 96 ntBASIC0.83□□□□□ -2.28
LRRC28Q86X40 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.83□□□□□ -2.28
LRRC28Q86X40 CST2P1-201ENST00000425770 87 ntBASIC0.83□□□□□ -2.28
LRRC28Q86X40 AC245047.4-201ENST00000433189 144 ntBASIC0.83□□□□□ -2.28
LRRC28Q86X40 MTATP6P16-201ENST00000434543 526 ntBASIC0.83□□□□□ -2.28
LRRC28Q86X40 AC099677.2-201ENST00000436385 175 ntBASIC0.83□□□□□ -2.28
LRRC28Q86X40 AC013470.1-201ENST00000453438 462 ntBASIC0.83□□□□□ -2.28
LRRC28Q86X40 AC145146.1-201ENST00000496370 254 ntBASIC0.83□□□□□ -2.28
LRRC28Q86X40 UBL5P1-201ENST00000507979 193 ntBASIC0.83□□□□□ -2.28
LRRC28Q86X40 SNORA31.16-201ENST00000516773 139 ntBASIC0.83□□□□□ -2.28
LRRC28Q86X40 RNA5SP490-201ENST00000517141 136 ntBASIC0.83□□□□□ -2.28
LRRC28Q86X40 AL359999.1-201ENST00000604513 294 ntBASIC0.83□□□□□ -2.28
LRRC28Q86X40 AC123912.5-201ENST00000605470 343 ntBASIC0.83□□□□□ -2.28
LRRC28Q86X40 AC009159.2-201ENST00000617603 606 ntBASIC0.83□□□□□ -2.28
LRRC28Q86X40 AC009878.1-201ENST00000621819 340 ntBASIC0.83□□□□□ -2.28
LRRC28Q86X40 AC130454.1-201ENST00000622948 401 ntBASIC0.83□□□□□ -2.28
LRRC28Q86X40 AC097372.5-201ENST00000623665 376 ntBASIC0.83□□□□□ -2.28
LRRC28Q86X40 AC019226.2-201ENST00000625973 424 ntBASIC0.83□□□□□ -2.28
LRRC28Q86X40 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
LRRC28Q86X40 Y_RNA.191-201ENST00000363972 113 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 RNU6-501P-201ENST00000364072 100 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 SNORD1A-201ENST00000364968 72 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 SNORD114-22-201ENST00000365423 72 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 RNU6-26P-201ENST00000383985 107 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 Y_RNA.576-201ENST00000384781 102 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 SNORA26.3-201ENST00000391119 136 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 RPL23AP32-201ENST00000395315 459 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 RNU6-387P-201ENST00000411331 105 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 GTF2IP13-201ENST00000438487 386 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 AL512286.1-201ENST00000439244 400 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 AC027119.1-201ENST00000440877 241 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 JTBP1-201ENST00000441314 247 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.82□□□□□ -2.28
LRRC28Q86X40 OR2AQ1P-201ENST00000451972 200 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.82□□□□□ -2.28
LRRC28Q86X40 AC007547.1-201ENST00000462177 490 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.82□□□□□ -2.28
LRRC28Q86X40 ARL2BPP4-201ENST00000506854 471 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 AC034244.1-201ENST00000507687 207 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 SCARNA24.1-201ENST00000516465 137 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 RNU6-113P-201ENST00000516653 101 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 RNA5SP437-201ENST00000517249 129 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 MRPS36P3-201ENST00000519284 130 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.82□□□□□ -2.28
LRRC28Q86X40 AC115990.1-201ENST00000526957 301 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
LRRC28Q86X40 AC008015.1-201ENST00000555505 465 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.82□□□□□ -2.28
LRRC28Q86X40 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.82□□□□□ -2.28
LRRC28Q86X40 PCMTD1P2-201ENST00000565017 355 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 MIR4452-201ENST00000583004 71 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 AP003465.2-201ENST00000602571 373 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 AC120349.3-201ENST00000624377 529 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 AC095038.3-201ENST00000634439 195 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 AC006927.3-201ENST00000638789 384 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 OR4G1P-203ENST00000641984 1631 ntBASIC0.82□□□□□ -2.28
LRRC28Q86X40 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
LRRC28Q86X40 SNORD32A-201ENST00000364805 84 ntBASIC0.81□□□□□ -2.28
LRRC28Q86X40 SNORD115-7-201ENST00000365306 82 ntBASIC0.81□□□□□ -2.28
LRRC28Q86X40 RNU6-169P-201ENST00000365336 107 ntBASIC0.81□□□□□ -2.28
LRRC28Q86X40 RNU6-142P-201ENST00000384019 107 ntBASIC0.81□□□□□ -2.28
LRRC28Q86X40 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.81□□□□□ -2.28
LRRC28Q86X40 AC098592.1-201ENST00000419352 333 ntBASIC0.81□□□□□ -2.28
LRRC28Q86X40 AC119618.1-201ENST00000434191 222 ntBASIC0.81□□□□□ -2.28
LRRC28Q86X40 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.81□□□□□ -2.28
LRRC28Q86X40 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.81□□□□□ -2.28
LRRC28Q86X40 MTND1P18-201ENST00000448191 573 ntBASIC0.81□□□□□ -2.28
LRRC28Q86X40 EPS15P1-201ENST00000448836 336 ntBASIC0.81□□□□□ -2.28
LRRC28Q86X40 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.81□□□□□ -2.28
LRRC28Q86X40 AC097473.1-201ENST00000508142 408 ntBASIC0.81□□□□□ -2.28
LRRC28Q86X40 MTND3P5-201ENST00000512798 333 ntBASIC0.81□□□□□ -2.28
LRRC28Q86X40 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.81□□□□□ -2.28
LRRC28Q86X40 MTATP6P9-201ENST00000515039 680 ntBASIC0.81□□□□□ -2.28
LRRC28Q86X40 AC090572.1-201ENST00000519251 160 ntBASIC0.81□□□□□ -2.28
LRRC28Q86X40 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.81□□□□□ -2.28
LRRC28Q86X40 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.81□□□□□ -2.28
LRRC28Q86X40 MIR5094-201ENST00000578766 85 ntBASIC0.81□□□□□ -2.28
LRRC28Q86X40 MIR5692A1-201ENST00000580523 69 ntBASIC0.81□□□□□ -2.28
LRRC28Q86X40 AC012507.3-201ENST00000603556 477 ntBASIC0.81□□□□□ -2.28
LRRC28Q86X40 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
LRRC28Q86X40 MIR6857-201ENST00000613267 93 ntBASIC0.81□□□□□ -2.28
LRRC28Q86X40 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
LRRC28Q86X40 AC012676.2-201ENST00000619258 186 ntBASIC0.81□□□□□ -2.28
LRRC28Q86X40 MIR8063-201ENST00000621930 81 ntBASIC0.81□□□□□ -2.28
LRRC28Q86X40 AC138649.3-201ENST00000622154 254 ntBASIC0.81□□□□□ -2.28
LRRC28Q86X40 SNORD98-201ENST00000636377 67 ntBASIC0.81□□□□□ -2.28
LRRC28Q86X40 AL450472.1-202ENST00000637286 180 ntBASIC0.81□□□□□ -2.28
LRRC28Q86X40 AC007671.2-201ENST00000637344 619 ntBASIC0.81□□□□□ -2.28
LRRC28Q86X40 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.8□□□□□ -2.28
LRRC28Q86X40 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 271.5 ms