Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.24□□□□□ -1.89
PNKPQ96T60 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.24□□□□□ -1.89
PNKPQ96T60 BPY2DP-201ENST00000422208 265 ntBASIC3.24□□□□□ -1.89
PNKPQ96T60 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.24□□□□□ -1.89
PNKPQ96T60 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.24□□□□□ -1.89
PNKPQ96T60 AC124916.1-201ENST00000444020 547 ntBASIC3.24□□□□□ -1.89
PNKPQ96T60 AL031659.1-201ENST00000447075 539 ntBASIC3.24□□□□□ -1.89
PNKPQ96T60 MTCO3P8-201ENST00000453691 755 ntBASIC3.24□□□□□ -1.89
PNKPQ96T60 RPL30P10-201ENST00000488148 337 ntBASIC3.24□□□□□ -1.89
PNKPQ96T60 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.24□□□□□ -1.89
PNKPQ96T60 Y_RNA.715-201ENST00000517082 110 ntBASIC3.24□□□□□ -1.89
PNKPQ96T60 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.24□□□□□ -1.89
PNKPQ96T60 AL161670.1-201ENST00000554348 137 ntBASIC3.24□□□□□ -1.89
PNKPQ96T60 AC004817.2-201ENST00000561794 651 ntBASIC3.24□□□□□ -1.89
PNKPQ96T60 HMGN2P15-201ENST00000585707 270 ntBASIC3.24□□□□□ -1.89
PNKPQ96T60 AC060766.3-201ENST00000591442 263 ntBASIC3.24□□□□□ -1.89
PNKPQ96T60 7SK.7-201ENST00000603504 247 ntBASIC3.24□□□□□ -1.89
PNKPQ96T60 AL355297.3-201ENST00000604082 446 ntBASIC3.24□□□□□ -1.89
PNKPQ96T60 AL021879.1-201ENST00000611756 288 ntBASIC3.24□□□□□ -1.89
PNKPQ96T60 AC107871.2-201ENST00000612894 502 ntBASIC3.24□□□□□ -1.89
PNKPQ96T60 U2.1-201ENST00000618978 145 ntBASIC3.24□□□□□ -1.89
PNKPQ96T60 MIR622-201ENST00000638396 96 ntBASIC3.24□□□□□ -1.89
PNKPQ96T60 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PNKPQ96T60 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
PNKPQ96T60 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PNKPQ96T60 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PNKPQ96T60 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.24□□□□□ -1.89
PNKPQ96T60 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
PNKPQ96T60 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
PNKPQ96T60 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
PNKPQ96T60 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.23□□□□□ -1.89
PNKPQ96T60 RNU6-858P-201ENST00000362436 107 ntBASIC3.23□□□□□ -1.89
PNKPQ96T60 RNU6-1280P-201ENST00000365211 107 ntBASIC3.23□□□□□ -1.89
PNKPQ96T60 Y_RNA.405-201ENST00000383979 100 ntBASIC3.23□□□□□ -1.89
PNKPQ96T60 Y_RNA.451-201ENST00000384200 100 ntBASIC3.23□□□□□ -1.89
PNKPQ96T60 Y_RNA.524-201ENST00000384564 100 ntBASIC3.23□□□□□ -1.89
PNKPQ96T60 SNORA1.3-201ENST00000384676 136 ntBASIC3.23□□□□□ -1.89
PNKPQ96T60 Y_RNA.561-201ENST00000384694 100 ntBASIC3.23□□□□□ -1.89
PNKPQ96T60 SNORD15B-201ENST00000384714 146 ntBASIC3.23□□□□□ -1.89
PNKPQ96T60 SNORA12.2-201ENST00000391040 156 ntBASIC3.23□□□□□ -1.89
PNKPQ96T60 AC114482.1-201ENST00000418010 247 ntBASIC3.23□□□□□ -1.89
PNKPQ96T60 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.23□□□□□ -1.89
PNKPQ96T60 Z82188.1-201ENST00000436709 154 ntBASIC3.23□□□□□ -1.89
PNKPQ96T60 HMGN2P10-201ENST00000448085 265 ntBASIC3.23□□□□□ -1.89
PNKPQ96T60 SNRPGP3-201ENST00000469405 227 ntBASIC3.23□□□□□ -1.89
PNKPQ96T60 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.23□□□□□ -1.89
PNKPQ96T60 MRPL42P6-201ENST00000486397 371 ntBASIC3.23□□□□□ -1.89
PNKPQ96T60 RN7SL633P-201ENST00000488974 297 ntBASIC3.23□□□□□ -1.89
PNKPQ96T60 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.23□□□□□ -1.89
PNKPQ96T60 AC097462.2-201ENST00000504623 481 ntBASIC3.23□□□□□ -1.89
PNKPQ96T60 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.23□□□□□ -1.89
PNKPQ96T60 AC091874.1-201ENST00000511402 339 ntBASIC3.23□□□□□ -1.89
PNKPQ96T60 AC009812.2-201ENST00000517657 457 ntBASIC3.23□□□□□ -1.89
PNKPQ96T60 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.23□□□□□ -1.89
PNKPQ96T60 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.23□□□□□ -1.89
PNKPQ96T60 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.23□□□□□ -1.89
PNKPQ96T60 AC021739.1-201ENST00000559631 174 ntBASIC3.23□□□□□ -1.89
PNKPQ96T60 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.23□□□□□ -1.89
PNKPQ96T60 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.23□□□□□ -1.89
PNKPQ96T60 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.23□□□□□ -1.89
PNKPQ96T60 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.23□□□□□ -1.89
PNKPQ96T60 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PNKPQ96T60 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PNKPQ96T60 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.22□□□□□ -1.89
PNKPQ96T60 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.22□□□□□ -1.89
PNKPQ96T60 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
PNKPQ96T60 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PNKPQ96T60 SNORA80A-201ENST00000363922 136 ntBASIC3.22□□□□□ -1.89
PNKPQ96T60 Y_RNA.401-201ENST00000383965 117 ntBASIC3.22□□□□□ -1.89
PNKPQ96T60 RNU6-708P-201ENST00000384217 107 ntBASIC3.22□□□□□ -1.89
PNKPQ96T60 SNORA51.11-201ENST00000384442 131 ntBASIC3.22□□□□□ -1.89
PNKPQ96T60 SAR1AP2-201ENST00000392696 594 ntBASIC3.22□□□□□ -1.89
PNKPQ96T60 Y_RNA.592-201ENST00000410274 109 ntBASIC3.22□□□□□ -1.89
PNKPQ96T60 AL451074.5-201ENST00000415894 435 ntBASIC3.22□□□□□ -1.89
PNKPQ96T60 AC074117.2-201ENST00000417130 397 ntBASIC3.22□□□□□ -1.89
PNKPQ96T60 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.22□□□□□ -1.89
PNKPQ96T60 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.22□□□□□ -1.89
PNKPQ96T60 AL731563.1-201ENST00000442202 214 ntBASIC3.22□□□□□ -1.89
PNKPQ96T60 AL590664.1-201ENST00000448065 339 ntBASIC3.22□□□□□ -1.89
PNKPQ96T60 RN7SKP210-201ENST00000459176 261 ntBASIC3.22□□□□□ -1.89
PNKPQ96T60 RPL30P14-201ENST00000482744 348 ntBASIC3.22□□□□□ -1.89
PNKPQ96T60 CR383656.8-201ENST00000549046 145 ntBASIC3.22□□□□□ -1.89
PNKPQ96T60 NACAP3-201ENST00000552100 481 ntBASIC3.22□□□□□ -1.89
PNKPQ96T60 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.22□□□□□ -1.89
PNKPQ96T60 AC002076.2-201ENST00000617362 122 ntBASIC3.22□□□□□ -1.89
PNKPQ96T60 MIR6076-201ENST00000617521 113 ntBASIC3.22□□□□□ -1.89
PNKPQ96T60 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PNKPQ96T60 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.21□□□□□ -1.9
PNKPQ96T60 ADAM3A-203ENST00000461344 2157 ntBASIC3.21□□□□□ -1.9
PNKPQ96T60 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.21□□□□□ -1.9
PNKPQ96T60 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PNKPQ96T60 Y_RNA.152-201ENST00000363578 100 ntBASIC3.21□□□□□ -1.9
PNKPQ96T60 SNORA71.1-201ENST00000364523 117 ntBASIC3.21□□□□□ -1.9
PNKPQ96T60 RNU6-702P-201ENST00000364982 107 ntBASIC3.21□□□□□ -1.9
PNKPQ96T60 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PNKPQ96T60 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.21□□□□□ -1.9
PNKPQ96T60 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.21□□□□□ -1.9
PNKPQ96T60 DYNLT3P2-201ENST00000442517 295 ntBASIC3.21□□□□□ -1.9
PNKPQ96T60 AL513124.1-201ENST00000450410 614 ntBASIC3.21□□□□□ -1.9
PNKPQ96T60 RN7SL499P-201ENST00000481141 276 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 220 ms