Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.73□□□□□ -1.81
CTSKP43235 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.73□□□□□ -1.81
CTSKP43235 COX6CP14-201ENST00000469580 174 ntBASIC3.73□□□□□ -1.81
CTSKP43235 RPS4XP13-201ENST00000483219 789 ntBASIC3.73□□□□□ -1.81
CTSKP43235 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.73□□□□□ -1.81
CTSKP43235 RNU1-61P-201ENST00000516107 151 ntBASIC3.73□□□□□ -1.81
CTSKP43235 RNU6-581P-201ENST00000516214 105 ntBASIC3.73□□□□□ -1.81
CTSKP43235 SNORA70.24-201ENST00000517233 118 ntBASIC3.73□□□□□ -1.81
CTSKP43235 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.73□□□□□ -1.81
CTSKP43235 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.73□□□□□ -1.81
CTSKP43235 UBL5P4-201ENST00000562584 236 ntBASIC3.73□□□□□ -1.81
CTSKP43235 MIR3200-201ENST00000580767 85 ntBASIC3.73□□□□□ -1.81
CTSKP43235 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.73□□□□□ -1.81
CTSKP43235 AL359198.2-201ENST00000611836 194 ntBASIC3.73□□□□□ -1.81
CTSKP43235 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.73□□□□□ -1.81
CTSKP43235 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CTSKP43235 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.73□□□□□ -1.81
CTSKP43235 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CTSKP43235 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CTSKP43235 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.73□□□□□ -1.81
CTSKP43235 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CTSKP43235 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.72□□□□□ -1.81
CTSKP43235 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTSKP43235 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTSKP43235 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.72□□□□□ -1.81
CTSKP43235 MIR411-201ENST00000362239 96 ntBASIC3.72□□□□□ -1.81
CTSKP43235 SNORA25.1-201ENST00000362326 128 ntBASIC3.72□□□□□ -1.81
CTSKP43235 RNU6-514P-201ENST00000384208 107 ntBASIC3.72□□□□□ -1.81
CTSKP43235 MIR218-2-201ENST00000385006 110 ntBASIC3.72□□□□□ -1.81
CTSKP43235 MIR329-1-201ENST00000385028 80 ntBASIC3.72□□□□□ -1.81
CTSKP43235 U3.19-201ENST00000390893 196 ntBASIC3.72□□□□□ -1.81
CTSKP43235 SNORA26.3-201ENST00000391119 136 ntBASIC3.72□□□□□ -1.81
CTSKP43235 HLFP1-201ENST00000402375 499 ntBASIC3.72□□□□□ -1.81
CTSKP43235 Z98941.1-201ENST00000407764 100 ntBASIC3.72□□□□□ -1.81
CTSKP43235 RNU4-30P-201ENST00000410245 143 ntBASIC3.72□□□□□ -1.81
CTSKP43235 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.72□□□□□ -1.81
CTSKP43235 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.72□□□□□ -1.81
CTSKP43235 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.72□□□□□ -1.81
CTSKP43235 SNORA25.14-201ENST00000516481 132 ntBASIC3.72□□□□□ -1.81
CTSKP43235 CBX3P4-201ENST00000538909 354 ntBASIC3.72□□□□□ -1.81
CTSKP43235 AL391261.3-201ENST00000557194 520 ntBASIC3.72□□□□□ -1.81
CTSKP43235 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.72□□□□□ -1.81
CTSKP43235 MIR3609-201ENST00000582661 80 ntBASIC3.72□□□□□ -1.81
CTSKP43235 AL162424.1-201ENST00000602325 221 ntBASIC3.72□□□□□ -1.81
CTSKP43235 Z83818.1-201ENST00000603584 150 ntBASIC3.72□□□□□ -1.81
CTSKP43235 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.72□□□□□ -1.81
CTSKP43235 AL591424.2-201ENST00000617023 128 ntBASIC3.72□□□□□ -1.81
CTSKP43235 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.72□□□□□ -1.81
CTSKP43235 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTSKP43235 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTSKP43235 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CTSKP43235 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CTSKP43235 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CTSKP43235 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTSKP43235 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTSKP43235 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
CTSKP43235 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CTSKP43235 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.72□□□□□ -1.81
CTSKP43235 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.71□□□□□ -1.81
CTSKP43235 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
CTSKP43235 AL079305.1-201ENST00000623159 3008 ntBASIC3.71□□□□□ -1.81
CTSKP43235 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.71□□□□□ -1.82
CTSKP43235 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CTSKP43235 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.71□□□□□ -1.82
CTSKP43235 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CTSKP43235 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CTSKP43235 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.71□□□□□ -1.82
CTSKP43235 RNU6-626P-201ENST00000363354 107 ntBASIC3.71□□□□□ -1.82
CTSKP43235 RNU6-270P-201ENST00000364131 105 ntBASIC3.71□□□□□ -1.82
CTSKP43235 Y_RNA.464-201ENST00000384282 110 ntBASIC3.71□□□□□ -1.82
CTSKP43235 Y_RNA.570-201ENST00000384750 101 ntBASIC3.71□□□□□ -1.82
CTSKP43235 RNVU1-14-201ENST00000384770 164 ntBASIC3.71□□□□□ -1.82
CTSKP43235 MTCO1P5-201ENST00000433573 344 ntBASIC3.71□□□□□ -1.82
CTSKP43235 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.71□□□□□ -1.82
CTSKP43235 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.71□□□□□ -1.82
CTSKP43235 AL392103.1-201ENST00000447000 198 ntBASIC3.71□□□□□ -1.82
CTSKP43235 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.71□□□□□ -1.82
CTSKP43235 RPL39P29-201ENST00000447779 157 ntBASIC3.71□□□□□ -1.82
CTSKP43235 RNA5SP310-201ENST00000459084 116 ntBASIC3.71□□□□□ -1.82
CTSKP43235 RNU7-120P-201ENST00000459334 63 ntBASIC3.71□□□□□ -1.82
CTSKP43235 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.71□□□□□ -1.82
CTSKP43235 AP001025.1-201ENST00000486139 332 ntBASIC3.71□□□□□ -1.82
CTSKP43235 RPS29P20-201ENST00000489592 171 ntBASIC3.71□□□□□ -1.82
CTSKP43235 AC006445.2-201ENST00000510061 472 ntBASIC3.71□□□□□ -1.82
CTSKP43235 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.71□□□□□ -1.82
CTSKP43235 RNU6-406P-201ENST00000516470 107 ntBASIC3.71□□□□□ -1.82
CTSKP43235 RNU6-567P-201ENST00000516746 107 ntBASIC3.71□□□□□ -1.82
CTSKP43235 ACA59.2-201ENST00000517061 156 ntBASIC3.71□□□□□ -1.82
CTSKP43235 AC006199.1-201ENST00000548728 219 ntBASIC3.71□□□□□ -1.82
CTSKP43235 AC090897.2-201ENST00000581715 130 ntBASIC3.71□□□□□ -1.82
CTSKP43235 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.71□□□□□ -1.82
CTSKP43235 MIR3199-2-201ENST00000636243 86 ntBASIC3.71□□□□□ -1.82
CTSKP43235 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.71□□□□□ -1.82
CTSKP43235 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CTSKP43235 AL049781.1-201ENST00000623195 3585 ntBASIC3.71□□□□□ -1.82
CTSKP43235 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CTSKP43235 AL133412.1-201ENST00000380194 2992 ntBASIC3.71□□□□□ -1.82
CTSKP43235 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CTSKP43235 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.7□□□□□ -1.82
CTSKP43235 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 486.1 ms