Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 AL592156.1-201ENST00000508758 304 ntBASIC6□□□□□ -1.45
CCDC61Q9Y6R9 RNU6-365P-201ENST00000517113 106 ntBASIC6□□□□□ -1.45
CCDC61Q9Y6R9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC6□□□□□ -1.45
CCDC61Q9Y6R9 TVP23BP1-201ENST00000557500 617 ntBASIC6□□□□□ -1.45
CCDC61Q9Y6R9 MIR5009-201ENST00000578736 100 ntBASIC6□□□□□ -1.45
CCDC61Q9Y6R9 AC005562.2-201ENST00000618264 111 ntBASIC6□□□□□ -1.45
CCDC61Q9Y6R9 AC034229.5-201ENST00000624258 185 ntBASIC6□□□□□ -1.45
CCDC61Q9Y6R9 AC107068.1-201ENST00000563286 4218 ntBASIC6□□□□□ -1.45
CCDC61Q9Y6R9 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CCDC61Q9Y6R9 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6□□□□□ -1.45
CCDC61Q9Y6R9 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCDC61Q9Y6R9 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CCDC61Q9Y6R9 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC61Q9Y6R9 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.99□□□□□ -1.45
CCDC61Q9Y6R9 HMGN2P30-201ENST00000423237 256 ntBASIC5.99□□□□□ -1.45
CCDC61Q9Y6R9 AL117339.2-201ENST00000430475 180 ntBASIC5.99□□□□□ -1.45
CCDC61Q9Y6R9 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.99□□□□□ -1.45
CCDC61Q9Y6R9 AC022137.1-201ENST00000483735 151 ntBASIC5.99□□□□□ -1.45
CCDC61Q9Y6R9 AC108022.1-201ENST00000493466 478 ntBASIC5.99□□□□□ -1.45
CCDC61Q9Y6R9 AC099522.1-202ENST00000514718 367 ntBASIC5.99□□□□□ -1.45
CCDC61Q9Y6R9 RNA5SP446-201ENST00000515955 82 ntBASIC5.99□□□□□ -1.45
CCDC61Q9Y6R9 IGKV3-31-201ENST00000523109 329 ntBASIC5.99□□□□□ -1.45
CCDC61Q9Y6R9 AC105245.1-201ENST00000581934 244 ntBASIC5.99□□□□□ -1.45
CCDC61Q9Y6R9 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC61Q9Y6R9 AL133243.3-201ENST00000617415 3004 ntBASIC5.99□□□□□ -1.45
CCDC61Q9Y6R9 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC61Q9Y6R9 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC61Q9Y6R9 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC61Q9Y6R9 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CCDC61Q9Y6R9 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC61Q9Y6R9 AL121839.2-201ENST00000565058 6943 ntBASIC5.98□□□□□ -1.45
CCDC61Q9Y6R9 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC61Q9Y6R9 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
CCDC61Q9Y6R9 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC61Q9Y6R9 MIR302B-201ENST00000362188 73 ntBASIC5.98□□□□□ -1.45
CCDC61Q9Y6R9 Y_RNA.17-201ENST00000362433 111 ntBASIC5.98□□□□□ -1.45
CCDC61Q9Y6R9 Y_RNA.93-201ENST00000363066 109 ntBASIC5.98□□□□□ -1.45
CCDC61Q9Y6R9 U3.8-201ENST00000363675 217 ntBASIC5.98□□□□□ -1.45
CCDC61Q9Y6R9 RNU6-1280P-201ENST00000365211 107 ntBASIC5.98□□□□□ -1.45
CCDC61Q9Y6R9 RNU6-788P-201ENST00000390967 104 ntBASIC5.98□□□□□ -1.45
CCDC61Q9Y6R9 MIR921-201ENST00000401133 56 ntBASIC5.98□□□□□ -1.45
CCDC61Q9Y6R9 RNA5SP504-201ENST00000410676 117 ntBASIC5.98□□□□□ -1.45
CCDC61Q9Y6R9 PPP1R11P1-201ENST00000486095 376 ntBASIC5.98□□□□□ -1.45
CCDC61Q9Y6R9 RNA5SP519-201ENST00000516480 119 ntBASIC5.98□□□□□ -1.45
CCDC61Q9Y6R9 RNU6-113P-201ENST00000516653 101 ntBASIC5.98□□□□□ -1.45
CCDC61Q9Y6R9 RNA5SP73-201ENST00000516744 108 ntBASIC5.98□□□□□ -1.45
CCDC61Q9Y6R9 AC090897.2-201ENST00000581715 130 ntBASIC5.98□□□□□ -1.45
CCDC61Q9Y6R9 AC018692.3-201ENST00000623929 123 ntBASIC5.98□□□□□ -1.45
CCDC61Q9Y6R9 U2.21-201ENST00000637295 81 ntBASIC5.98□□□□□ -1.45
CCDC61Q9Y6R9 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC61Q9Y6R9 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC61Q9Y6R9 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC61Q9Y6R9 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC61Q9Y6R9 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CCDC61Q9Y6R9 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC61Q9Y6R9 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC61Q9Y6R9 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC61Q9Y6R9 Y_RNA.91-201ENST00000363042 107 ntBASIC5.97□□□□□ -1.45
CCDC61Q9Y6R9 RNY4P6-201ENST00000363667 96 ntBASIC5.97□□□□□ -1.45
CCDC61Q9Y6R9 U3.15-201ENST00000365398 212 ntBASIC5.97□□□□□ -1.45
CCDC61Q9Y6R9 RNU1-63P-201ENST00000383902 164 ntBASIC5.97□□□□□ -1.45
CCDC61Q9Y6R9 RNU1-73P-201ENST00000383971 164 ntBASIC5.97□□□□□ -1.45
CCDC61Q9Y6R9 AC004866.1-201ENST00000411748 78 ntBASIC5.97□□□□□ -1.45
CCDC61Q9Y6R9 AC007064.1-201ENST00000412238 351 ntBASIC5.97□□□□□ -1.45
CCDC61Q9Y6R9 SNORA84-201ENST00000459229 133 ntBASIC5.97□□□□□ -1.45
CCDC61Q9Y6R9 AC141557.1-201ENST00000540982 400 ntBASIC5.97□□□□□ -1.45
CCDC61Q9Y6R9 MIR5006-201ENST00000583027 110 ntBASIC5.97□□□□□ -1.45
CCDC61Q9Y6R9 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC61Q9Y6R9 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CCDC61Q9Y6R9 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
CCDC61Q9Y6R9 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CCDC61Q9Y6R9 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC61Q9Y6R9 AL022322.2-201ENST00000624072 20397 ntBASIC5.97□□□□□ -1.45
CCDC61Q9Y6R9 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC61Q9Y6R9 AC002543.1-201ENST00000299783 1954 ntBASIC5.97□□□□□ -1.45
CCDC61Q9Y6R9 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.96□□□□□ -1.45
CCDC61Q9Y6R9 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CCDC61Q9Y6R9 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CCDC61Q9Y6R9 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC61Q9Y6R9 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC61Q9Y6R9 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC61Q9Y6R9 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
CCDC61Q9Y6R9 RNU6-778P-201ENST00000363269 103 ntBASIC5.96□□□□□ -1.46
CCDC61Q9Y6R9 RNA5SP175-201ENST00000364275 119 ntBASIC5.96□□□□□ -1.46
CCDC61Q9Y6R9 RNY1P1-201ENST00000364372 112 ntBASIC5.96□□□□□ -1.46
CCDC61Q9Y6R9 DYNLT3P1-201ENST00000378574 347 ntBASIC5.96□□□□□ -1.46
CCDC61Q9Y6R9 MIR181B1-201ENST00000385240 110 ntBASIC5.96□□□□□ -1.46
CCDC61Q9Y6R9 SNORA19.1-201ENST00000410656 129 ntBASIC5.96□□□□□ -1.46
CCDC61Q9Y6R9 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC61Q9Y6R9 AC027124.2-201ENST00000428249 105 ntBASIC5.96□□□□□ -1.46
CCDC61Q9Y6R9 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC61Q9Y6R9 AC023449.1-201ENST00000454464 154 ntBASIC5.96□□□□□ -1.46
CCDC61Q9Y6R9 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC61Q9Y6R9 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC61Q9Y6R9 FAM71BP1-201ENST00000604431 523 ntBASIC5.96□□□□□ -1.46
CCDC61Q9Y6R9 IGLL4P-201ENST00000614590 133 ntBASIC5.96□□□□□ -1.46
CCDC61Q9Y6R9 AC091905.2-201ENST00000623143 306 ntBASIC5.96□□□□□ -1.46
CCDC61Q9Y6R9 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC61Q9Y6R9 AC126323.6-202ENST00000568092 3511 ntBASIC5.96□□□□□ -1.46
CCDC61Q9Y6R9 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 181.8 ms