Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AL512605.2-201ENST00000592972 256 ntBASIC1.24□□□□□ -2.21
SHANK3Q9BYB0 ELOCP5-201ENST00000604924 333 ntBASIC1.24□□□□□ -2.21
SHANK3Q9BYB0 AC105129.3-201ENST00000605455 485 ntBASIC1.24□□□□□ -2.21
SHANK3Q9BYB0 AC098614.4-201ENST00000607601 462 ntBASIC1.24□□□□□ -2.21
SHANK3Q9BYB0 AC017037.3-201ENST00000625016 472 ntBASIC1.24□□□□□ -2.21
SHANK3Q9BYB0 Y_RNA.33-201ENST00000362591 102 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 RNU6-1210P-201ENST00000363775 107 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 MIR29C-201ENST00000385231 88 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 RNA5SP212-201ENST00000391223 107 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 RNU2-23P-201ENST00000410545 195 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 MTCO3P46-201ENST00000425787 232 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 AC104806.1-201ENST00000508720 308 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 MTND2P7-201ENST00000521337 640 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 AC007363.1-201ENST00000604736 620 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 SNORD14A-201ENST00000606526 91 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 uc_338.15-201ENST00000615470 191 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 AC068787.1-201ENST00000623908 691 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 AC092656.1-203ENST00000624134 423 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 MIR3529-201ENST00000637713 78 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 RNU1-72P-201ENST00000362976 153 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 U3.13-201ENST00000364804 214 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 Y_RNA.303-201ENST00000364998 94 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 HMGN2P39-201ENST00000398005 273 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 RNA5SP193-201ENST00000410353 107 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 SSR1P2-201ENST00000415208 787 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 HSPE1P24-201ENST00000450782 238 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 AC112204.1-201ENST00000502591 103 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 AC091965.2-201ENST00000512324 613 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 RNU7-193P-201ENST00000516723 65 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 RNU6-914P-201ENST00000516749 109 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 AL356432.3-201ENST00000568952 465 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 MIR5692A1-201ENST00000580523 69 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 AC008751.2-201ENST00000597885 980 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 AL359999.1-201ENST00000604513 294 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 MIR6857-201ENST00000613267 93 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 AC092140.2-201ENST00000618027 521 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 AC009878.1-201ENST00000621819 340 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 OR4G3P-201ENST00000633500 913 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 AL445523.1-201ENST00000451184 1362 ntBASIC1.23□□□□□ -2.21
SHANK3Q9BYB0 ZNF702P-202ENST00000434269 1966 ntBASIC1.22□□□□□ -2.21
SHANK3Q9BYB0 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SHANK3Q9BYB0 RNU6-1010P-201ENST00000362757 107 ntBASIC1.22□□□□□ -2.21
SHANK3Q9BYB0 BTF3L4P1-201ENST00000413813 468 ntBASIC1.22□□□□□ -2.21
SHANK3Q9BYB0 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.22□□□□□ -2.21
SHANK3Q9BYB0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.22□□□□□ -2.21
SHANK3Q9BYB0 AC015922.2-201ENST00000435593 184 ntBASIC1.22□□□□□ -2.21
SHANK3Q9BYB0 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.22□□□□□ -2.21
SHANK3Q9BYB0 RPL30P11-203ENST00000598995 310 ntBASIC1.22□□□□□ -2.21
SHANK3Q9BYB0 AC073544.2-201ENST00000601155 540 ntBASIC1.22□□□□□ -2.21
SHANK3Q9BYB0 AL031281.1-201ENST00000604049 488 ntBASIC1.22□□□□□ -2.21
SHANK3Q9BYB0 AC018714.1-201ENST00000605028 208 ntBASIC1.22□□□□□ -2.21
SHANK3Q9BYB0 AC021646.1-201ENST00000605469 484 ntBASIC1.22□□□□□ -2.21
SHANK3Q9BYB0 AP002360.4-201ENST00000606980 481 ntBASIC1.22□□□□□ -2.21
SHANK3Q9BYB0 AC027807.2-201ENST00000616099 408 ntBASIC1.22□□□□□ -2.21
SHANK3Q9BYB0 AL607023.1-201ENST00000620045 248 ntBASIC1.22□□□□□ -2.21
SHANK3Q9BYB0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.22□□□□□ -2.21
SHANK3Q9BYB0 AC018630.2-201ENST00000534866 2403 ntBASIC1.22□□□□□ -2.21
SHANK3Q9BYB0 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.21□□□□□ -2.22
SHANK3Q9BYB0 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.21□□□□□ -2.22
SHANK3Q9BYB0 MTND4P16-201ENST00000466108 1367 ntBASIC1.21□□□□□ -2.22
SHANK3Q9BYB0 RNU6-105P-201ENST00000363909 104 ntBASIC1.21□□□□□ -2.22
SHANK3Q9BYB0 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.21□□□□□ -2.22
SHANK3Q9BYB0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.21□□□□□ -2.22
SHANK3Q9BYB0 AC000111.3-201ENST00000433478 193 ntBASIC1.21□□□□□ -2.22
SHANK3Q9BYB0 AC245102.2-201ENST00000448956 180 ntBASIC1.21□□□□□ -2.22
SHANK3Q9BYB0 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.21□□□□□ -2.22
SHANK3Q9BYB0 RN7SKP256-201ENST00000517201 314 ntBASIC1.21□□□□□ -2.22
SHANK3Q9BYB0 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.21□□□□□ -2.22
SHANK3Q9BYB0 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.21□□□□□ -2.22
SHANK3Q9BYB0 MTND4LP18-201ENST00000526864 291 ntBASIC1.21□□□□□ -2.22
SHANK3Q9BYB0 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.21□□□□□ -2.22
SHANK3Q9BYB0 AC092325.1-201ENST00000566449 554 ntBASIC1.21□□□□□ -2.22
SHANK3Q9BYB0 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.21□□□□□ -2.22
SHANK3Q9BYB0 AC099842.1-201ENST00000619919 596 ntBASIC1.21□□□□□ -2.22
SHANK3Q9BYB0 AC024940.5-201ENST00000622889 474 ntBASIC1.21□□□□□ -2.22
SHANK3Q9BYB0 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.21□□□□□ -2.22
SHANK3Q9BYB0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.21□□□□□ -2.22
SHANK3Q9BYB0 FARSBP1-201ENST00000435808 1778 ntBASIC1.21□□□□□ -2.22
SHANK3Q9BYB0 SNORD113-6-201ENST00000363345 75 ntBASIC1.2□□□□□ -2.22
SHANK3Q9BYB0 RNU6-501P-201ENST00000364072 100 ntBASIC1.2□□□□□ -2.22
SHANK3Q9BYB0 RNU6-843P-201ENST00000384454 104 ntBASIC1.2□□□□□ -2.22
SHANK3Q9BYB0 SNORD116-20-201ENST00000384529 92 ntBASIC1.2□□□□□ -2.22
SHANK3Q9BYB0 U8.14-201ENST00000390843 143 ntBASIC1.2□□□□□ -2.22
SHANK3Q9BYB0 AL589872.1-201ENST00000426602 288 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms