Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 Y_RNA.422-201ENST00000384054 114 ntBASIC3.14□□□□□ -1.91
NKX6-1P78426 MIR625-201ENST00000385047 85 ntBASIC3.14□□□□□ -1.91
NKX6-1P78426 U3.19-201ENST00000390893 196 ntBASIC3.14□□□□□ -1.91
NKX6-1P78426 RNU6-1140P-201ENST00000410517 106 ntBASIC3.14□□□□□ -1.91
NKX6-1P78426 AC112771.1-201ENST00000463581 102 ntBASIC3.14□□□□□ -1.91
NKX6-1P78426 RPL31P41-201ENST00000477967 372 ntBASIC3.14□□□□□ -1.91
NKX6-1P78426 RPS4XP22-201ENST00000480755 780 ntBASIC3.14□□□□□ -1.91
NKX6-1P78426 RPL30P10-201ENST00000488148 337 ntBASIC3.14□□□□□ -1.91
NKX6-1P78426 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.14□□□□□ -1.91
NKX6-1P78426 MTND4LP22-201ENST00000508209 276 ntBASIC3.14□□□□□ -1.91
NKX6-1P78426 AC091874.1-201ENST00000511402 339 ntBASIC3.14□□□□□ -1.91
NKX6-1P78426 PHBP14-201ENST00000512887 367 ntBASIC3.14□□□□□ -1.91
NKX6-1P78426 RNU7-175P-201ENST00000515915 61 ntBASIC3.14□□□□□ -1.91
NKX6-1P78426 Y_RNA.711-201ENST00000516993 102 ntBASIC3.14□□□□□ -1.91
NKX6-1P78426 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.14□□□□□ -1.91
NKX6-1P78426 AC021231.3-201ENST00000558497 370 ntBASIC3.14□□□□□ -1.91
NKX6-1P78426 MIR4513-201ENST00000581077 86 ntBASIC3.14□□□□□ -1.91
NKX6-1P78426 MIR4765-201ENST00000585007 77 ntBASIC3.14□□□□□ -1.91
NKX6-1P78426 AC008739.2-201ENST00000597006 317 ntBASIC3.14□□□□□ -1.91
NKX6-1P78426 BRDTP1-201ENST00000605735 677 ntBASIC3.14□□□□□ -1.91
NKX6-1P78426 AL359198.2-201ENST00000611836 194 ntBASIC3.14□□□□□ -1.91
NKX6-1P78426 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.14□□□□□ -1.91
NKX6-1P78426 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NKX6-1P78426 AP003122.5-201ENST00000527668 3766 ntBASIC3.13□□□□□ -1.91
NKX6-1P78426 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
NKX6-1P78426 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
NKX6-1P78426 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NKX6-1P78426 SNORD9-201ENST00000362566 104 ntBASIC3.13□□□□□ -1.91
NKX6-1P78426 RNU4-56P-201ENST00000364700 142 ntBASIC3.13□□□□□ -1.91
NKX6-1P78426 U3.13-201ENST00000364804 214 ntBASIC3.13□□□□□ -1.91
NKX6-1P78426 Y_RNA.314-201ENST00000365114 102 ntBASIC3.13□□□□□ -1.91
NKX6-1P78426 AC117470.1-201ENST00000381974 330 ntBASIC3.13□□□□□ -1.91
NKX6-1P78426 RNU6-1156P-201ENST00000410365 100 ntBASIC3.13□□□□□ -1.91
NKX6-1P78426 CYCSP48-201ENST00000417124 323 ntBASIC3.13□□□□□ -1.91
NKX6-1P78426 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.13□□□□□ -1.91
NKX6-1P78426 AC008267.5-201ENST00000424928 265 ntBASIC3.13□□□□□ -1.91
NKX6-1P78426 CYCSP4-201ENST00000429682 331 ntBASIC3.13□□□□□ -1.91
NKX6-1P78426 Z98742.2-201ENST00000431564 187 ntBASIC3.13□□□□□ -1.91
NKX6-1P78426 NDUFB1P1-201ENST00000435191 180 ntBASIC3.13□□□□□ -1.91
NKX6-1P78426 AP001486.1-201ENST00000463339 476 ntBASIC3.13□□□□□ -1.91
NKX6-1P78426 AL049873.1-201ENST00000480540 376 ntBASIC3.13□□□□□ -1.91
NKX6-1P78426 RNU7-4P-201ENST00000516961 62 ntBASIC3.13□□□□□ -1.91
NKX6-1P78426 RN7SKP295-201ENST00000517264 153 ntBASIC3.13□□□□□ -1.91
NKX6-1P78426 MRPS36P4-201ENST00000534436 298 ntBASIC3.13□□□□□ -1.91
NKX6-1P78426 ANP32BP3-201ENST00000559213 706 ntBASIC3.13□□□□□ -1.91
NKX6-1P78426 AC004584.2-201ENST00000570407 410 ntBASIC3.13□□□□□ -1.91
NKX6-1P78426 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX6-1P78426 AC083806.3-201ENST00000614016 455 ntBASIC3.13□□□□□ -1.91
NKX6-1P78426 AC137590.2-201ENST00000619709 240 ntBASIC3.13□□□□□ -1.91
NKX6-1P78426 AC002064.3-201ENST00000623448 346 ntBASIC3.13□□□□□ -1.91
NKX6-1P78426 AL353743.1-202ENST00000431724 1695 ntBASIC3.13□□□□□ -1.91
NKX6-1P78426 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.13□□□□□ -1.91
NKX6-1P78426 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NKX6-1P78426 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
NKX6-1P78426 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NKX6-1P78426 RNU6-1285P-201ENST00000363480 105 ntBASIC3.12□□□□□ -1.91
NKX6-1P78426 RNU1-115P-201ENST00000365329 160 ntBASIC3.12□□□□□ -1.91
NKX6-1P78426 RNU6-308P-201ENST00000390957 107 ntBASIC3.12□□□□□ -1.91
NKX6-1P78426 SAR1AP2-201ENST00000392696 594 ntBASIC3.12□□□□□ -1.91
NKX6-1P78426 AL138885.1-201ENST00000405921 675 ntBASIC3.12□□□□□ -1.91
NKX6-1P78426 AC017079.2-201ENST00000416102 485 ntBASIC3.12□□□□□ -1.91
NKX6-1P78426 PMCHL1-202ENST00000423102 261 ntBASIC3.12□□□□□ -1.91
NKX6-1P78426 AC092423.1-201ENST00000430165 186 ntBASIC3.12□□□□□ -1.91
NKX6-1P78426 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.12□□□□□ -1.91
NKX6-1P78426 AC115115.1-201ENST00000449927 248 ntBASIC3.12□□□□□ -1.91
NKX6-1P78426 AC096576.1-201ENST00000489014 359 ntBASIC3.12□□□□□ -1.91
NKX6-1P78426 RPL23AP75-201ENST00000491601 451 ntBASIC3.12□□□□□ -1.91
NKX6-1P78426 AC021146.2-201ENST00000504736 556 ntBASIC3.12□□□□□ -1.91
NKX6-1P78426 SEM1P1-201ENST00000506694 209 ntBASIC3.12□□□□□ -1.91
NKX6-1P78426 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.12□□□□□ -1.91
NKX6-1P78426 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.12□□□□□ -1.91
NKX6-1P78426 SCARNA11.3-201ENST00000517276 130 ntBASIC3.12□□□□□ -1.91
NKX6-1P78426 CBX3P7-201ENST00000532876 502 ntBASIC3.12□□□□□ -1.91
NKX6-1P78426 MIR5701-3-201ENST00000578890 82 ntBASIC3.12□□□□□ -1.91
NKX6-1P78426 MIR5701-1-201ENST00000585138 82 ntBASIC3.12□□□□□ -1.91
NKX6-1P78426 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.12□□□□□ -1.91
NKX6-1P78426 KLKP1-201ENST00000595979 403 ntBASIC3.12□□□□□ -1.91
NKX6-1P78426 RPL23AP78-201ENST00000599928 470 ntBASIC3.12□□□□□ -1.91
NKX6-1P78426 AC073410.2-201ENST00000603240 332 ntBASIC3.12□□□□□ -1.91
NKX6-1P78426 AL133393.1-201ENST00000603277 287 ntBASIC3.12□□□□□ -1.91
NKX6-1P78426 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.12□□□□□ -1.91
NKX6-1P78426 AC006157.1-201ENST00000611750 366 ntBASIC3.12□□□□□ -1.91
NKX6-1P78426 MIR5701-2-201ENST00000615634 82 ntBASIC3.12□□□□□ -1.91
NKX6-1P78426 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NKX6-1P78426 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.12□□□□□ -1.91
NKX6-1P78426 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NKX6-1P78426 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NKX6-1P78426 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
NKX6-1P78426 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NKX6-1P78426 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NKX6-1P78426 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
NKX6-1P78426 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NKX6-1P78426 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NKX6-1P78426 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
NKX6-1P78426 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
NKX6-1P78426 OR56A5-201ENST00000340110 738 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 Y_RNA.31-201ENST00000362574 102 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 RNU6-1159P-201ENST00000362933 107 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 RNU1-33P-201ENST00000364249 162 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 SNORA22B-201ENST00000383876 138 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 180.1 ms