Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 CKS1BP7-201ENST00000522230 235 ntBASIC4.31□□□□□ -1.72
NFKB1P19838 IFITM8P-201ENST00000522529 394 ntBASIC4.31□□□□□ -1.72
NFKB1P19838 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NFKB1P19838 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.31□□□□□ -1.72
NFKB1P19838 DEFB117-201ENST00000602356 141 ntBASIC4.31□□□□□ -1.72
NFKB1P19838 AL356218.2-201ENST00000605264 187 ntBASIC4.31□□□□□ -1.72
NFKB1P19838 AL359198.2-201ENST00000611836 194 ntBASIC4.31□□□□□ -1.72
NFKB1P19838 AC004467.1-201ENST00000615678 330 ntBASIC4.31□□□□□ -1.72
NFKB1P19838 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NFKB1P19838 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.31□□□□□ -1.72
NFKB1P19838 AC091932.3-201ENST00000624223 323 ntBASIC4.31□□□□□ -1.72
NFKB1P19838 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.31□□□□□ -1.72
NFKB1P19838 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.31□□□□□ -1.72
NFKB1P19838 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
NFKB1P19838 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NFKB1P19838 AC022336.2-201ENST00000568966 2538 ntBASIC4.3□□□□□ -1.72
NFKB1P19838 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
NFKB1P19838 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
NFKB1P19838 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NFKB1P19838 Y_RNA.179-201ENST00000363844 90 ntBASIC4.3□□□□□ -1.72
NFKB1P19838 RNA5SP509-201ENST00000364577 119 ntBASIC4.3□□□□□ -1.72
NFKB1P19838 MIR1179-201ENST00000408703 91 ntBASIC4.3□□□□□ -1.72
NFKB1P19838 FTH1P6-201ENST00000430768 320 ntBASIC4.3□□□□□ -1.72
NFKB1P19838 AC244670.1-201ENST00000436879 112 ntBASIC4.3□□□□□ -1.72
NFKB1P19838 HMGN2P21-201ENST00000447764 270 ntBASIC4.3□□□□□ -1.72
NFKB1P19838 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.3□□□□□ -1.72
NFKB1P19838 RPL30P12-201ENST00000474666 353 ntBASIC4.3□□□□□ -1.72
NFKB1P19838 AC010409.1-201ENST00000487382 476 ntBASIC4.3□□□□□ -1.72
NFKB1P19838 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.3□□□□□ -1.72
NFKB1P19838 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
NFKB1P19838 AL592156.1-201ENST00000508758 304 ntBASIC4.3□□□□□ -1.72
NFKB1P19838 RNU6-155P-201ENST00000516347 100 ntBASIC4.3□□□□□ -1.72
NFKB1P19838 AC069240.1-201ENST00000548774 375 ntBASIC4.3□□□□□ -1.72
NFKB1P19838 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.3□□□□□ -1.72
NFKB1P19838 MIR3684-201ENST00000579779 74 ntBASIC4.3□□□□□ -1.72
NFKB1P19838 MIR432-201ENST00000606207 94 ntBASIC4.3□□□□□ -1.72
NFKB1P19838 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NFKB1P19838 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NFKB1P19838 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
NFKB1P19838 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NFKB1P19838 AC100821.1-201ENST00000523153 2479 ntBASIC4.3□□□□□ -1.72
NFKB1P19838 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.3□□□□□ -1.72
NFKB1P19838 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NFKB1P19838 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NFKB1P19838 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
NFKB1P19838 AC010300.1-201ENST00000600671 5134 ntBASIC4.29□□□□□ -1.72
NFKB1P19838 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
NFKB1P19838 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
NFKB1P19838 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
NFKB1P19838 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
NFKB1P19838 RNU6-1285P-201ENST00000363480 105 ntBASIC4.29□□□□□ -1.72
NFKB1P19838 RNU6-151P-201ENST00000364158 107 ntBASIC4.29□□□□□ -1.72
NFKB1P19838 RNU1-132P-201ENST00000364300 164 ntBASIC4.29□□□□□ -1.72
NFKB1P19838 SNORA7.2-201ENST00000364446 145 ntBASIC4.29□□□□□ -1.72
NFKB1P19838 RNU6-1279P-201ENST00000383917 103 ntBASIC4.29□□□□□ -1.72
NFKB1P19838 Y_RNA.498-201ENST00000384460 102 ntBASIC4.29□□□□□ -1.72
NFKB1P19838 AC012306.1-201ENST00000423267 114 ntBASIC4.29□□□□□ -1.72
NFKB1P19838 AL356535.1-201ENST00000440335 398 ntBASIC4.29□□□□□ -1.72
NFKB1P19838 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.29□□□□□ -1.72
NFKB1P19838 RPS23P7-201ENST00000466210 444 ntBASIC4.29□□□□□ -1.72
NFKB1P19838 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.29□□□□□ -1.72
NFKB1P19838 MIR4277-201ENST00000578298 84 ntBASIC4.29□□□□□ -1.72
NFKB1P19838 FAM27D1-201ENST00000612308 341 ntBASIC4.29□□□□□ -1.72
NFKB1P19838 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NFKB1P19838 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
NFKB1P19838 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NFKB1P19838 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
NFKB1P19838 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.29□□□□□ -1.72
NFKB1P19838 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
NFKB1P19838 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NFKB1P19838 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
NFKB1P19838 AC099654.7-201ENST00000635788 2127 ntBASIC4.28□□□□□ -1.72
NFKB1P19838 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NFKB1P19838 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.28□□□□□ -1.72
NFKB1P19838 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.28□□□□□ -1.72
NFKB1P19838 RNA5SP205-201ENST00000364653 136 ntBASIC4.28□□□□□ -1.72
NFKB1P19838 RNU6-818P-201ENST00000364837 108 ntBASIC4.28□□□□□ -1.72
NFKB1P19838 RNU6-275P-201ENST00000364910 107 ntBASIC4.28□□□□□ -1.72
NFKB1P19838 RNU6-793P-201ENST00000384233 104 ntBASIC4.28□□□□□ -1.72
NFKB1P19838 SNORD20-201ENST00000384550 80 ntBASIC4.28□□□□□ -1.72
NFKB1P19838 MIR493-201ENST00000385254 89 ntBASIC4.28□□□□□ -1.72
NFKB1P19838 RPL23AP48-201ENST00000406913 488 ntBASIC4.28□□□□□ -1.72
NFKB1P19838 RNU2-54P-201ENST00000410299 190 ntBASIC4.28□□□□□ -1.72
NFKB1P19838 AC016397.1-201ENST00000412463 242 ntBASIC4.28□□□□□ -1.72
NFKB1P19838 ELOCP21-201ENST00000412558 336 ntBASIC4.28□□□□□ -1.72
NFKB1P19838 NDUFB4P6-201ENST00000436819 366 ntBASIC4.28□□□□□ -1.72
NFKB1P19838 HMGB3P8-201ENST00000449709 577 ntBASIC4.28□□□□□ -1.72
NFKB1P19838 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.28□□□□□ -1.72
NFKB1P19838 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.28□□□□□ -1.72
NFKB1P19838 AC025445.1-201ENST00000502728 300 ntBASIC4.28□□□□□ -1.72
NFKB1P19838 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.28□□□□□ -1.72
NFKB1P19838 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NFKB1P19838 TVP23BP1-201ENST00000557500 617 ntBASIC4.28□□□□□ -1.72
NFKB1P19838 TGIF1P1-201ENST00000558095 802 ntBASIC4.28□□□□□ -1.72
NFKB1P19838 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.28□□□□□ -1.72
NFKB1P19838 SNX18P1Y-201ENST00000616231 511 ntBASIC4.28□□□□□ -1.72
NFKB1P19838 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NFKB1P19838 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NFKB1P19838 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
NFKB1P19838 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms