Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 RNU6-859P-201ENST00000362728 107 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 Y_RNA.184-201ENST00000363884 108 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 SNORA25.6-201ENST00000364121 118 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 SNORA68.1-201ENST00000364537 132 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 RNU6-1180P-201ENST00000364935 107 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 SNORD115-7-201ENST00000365306 82 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 SMIM11P1-201ENST00000369586 178 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 XGY1-201ENST00000381172 446 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 Y_RNA.474-201ENST00000384341 102 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 RNU6-14P-201ENST00000384630 106 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 RNU6-750P-201ENST00000390946 107 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 AL512633.1-201ENST00000399931 655 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 AL513475.1-201ENST00000406602 315 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 RNU2-29P-201ENST00000410423 189 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 EEF1A1P40-201ENST00000412883 573 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 AC096649.2-201ENST00000416186 393 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 ARL5AP4-201ENST00000430731 512 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 IFNA20P-201ENST00000436840 528 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 RPL7P12-201ENST00000446719 750 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 AL109933.2-201ENST00000452651 260 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 RNU7-66P-201ENST00000459469 62 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 AC090525.1-201ENST00000479116 478 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 CCDC34P1-201ENST00000507441 517 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 SNORA9.3-201ENST00000516383 129 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 OR5AL2P-201ENST00000532185 920 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 AC087241.2-201ENST00000535801 324 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 AC103810.1-201ENST00000579873 453 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 MIR4742-201ENST00000581069 85 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 AL050343.2-201ENST00000607338 280 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 AL589994.2-201ENST00000621124 579 ntBASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.88□□□□□ -1.95
DDX43Q9NXZ2 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 RNU6-1011P-201ENST00000384668 107 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 MIR34A-201ENST00000385130 110 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 AL356057.3-201ENST00000402607 340 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 AL139095.1-201ENST00000404326 391 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 RPS20P15-201ENST00000412792 311 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 MTND3P8-201ENST00000412909 339 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 RNU6-953P-201ENST00000459154 107 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 RNU6-329P-201ENST00000459618 107 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 AC008571.1-201ENST00000467232 300 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 AC128713.1-201ENST00000471495 306 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 AC026801.1-201ENST00000497178 464 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 AC103851.1-201ENST00000506833 274 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 FAM206BP-201ENST00000510179 541 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 Y_RNA.691-201ENST00000516611 103 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 RNU6-1153P-201ENST00000516760 105 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 BTF3P12-201ENST00000519620 469 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 BNIP3P6-201ENST00000549284 499 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 MIR5583-1-201ENST00000580941 59 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 MIR3670-2-201ENST00000582974 65 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 MIR4672-201ENST00000583126 81 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 MIR3670-1-201ENST00000584160 65 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 MIR3670-3-201ENST00000584855 65 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 OR1M4P-201ENST00000589199 287 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 AC104763.2-201ENST00000604179 382 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 MIR3670-4-201ENST00000612260 65 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 AC025034.2-201ENST00000623264 286 ntBASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.87□□□□□ -1.95
DDX43Q9NXZ2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 RNU6-831P-201ENST00000384548 107 ntBASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 Y_RNA.576-201ENST00000384781 102 ntBASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 MIR196B-201ENST00000384852 84 ntBASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 RPS15AP7-201ENST00000439294 405 ntBASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 RPL21P99-201ENST00000480369 423 ntBASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 RPL23AP70-201ENST00000483361 460 ntBASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 AC091885.1-201ENST00000506658 268 ntBASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 RNU4-49P-201ENST00000516080 140 ntBASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 Y_RNA.701-201ENST00000516812 110 ntBASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 RNA5SP503-201ENST00000517047 117 ntBASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 RPL7P20-201ENST00000520308 745 ntBASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 MIR3162-201ENST00000581818 82 ntBASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 AC016727.1-205ENST00000605437 569 ntBASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 AC130324.3-201ENST00000614165 542 ntBASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 180.9 ms