Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rtl1Q7M732 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rtl1Q7M732 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Rtl1Q7M732 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rtl1Q7M732 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC28.62■■■□□ 2.17
Rtl1Q7M732 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Rtl1Q7M732 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Rtl1Q7M732 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC28.62■■■□□ 2.17
Rtl1Q7M732 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rtl1Q7M732 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rtl1Q7M732 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
Rtl1Q7M732 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Rtl1Q7M732 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC28.61■■■□□ 2.17
Rtl1Q7M732 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Rtl1Q7M732 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Rtl1Q7M732 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Rtl1Q7M732 Gm38327-201ENSMUST00000195852 1755 ntBASIC28.61■■■□□ 2.17
Rtl1Q7M732 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC28.61■■■□□ 2.17
Rtl1Q7M732 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Rtl1Q7M732 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Rtl1Q7M732 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Rtl1Q7M732 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC28.6■■■□□ 2.17
Rtl1Q7M732 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Rtl1Q7M732 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
Rtl1Q7M732 Gm42473-201ENSMUST00000201056 2291 ntBASIC28.6■■■□□ 2.17
Rtl1Q7M732 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Rtl1Q7M732 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Rtl1Q7M732 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC28.6■■■□□ 2.17
Rtl1Q7M732 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC28.6■■■□□ 2.17
Rtl1Q7M732 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Rtl1Q7M732 Gm7222-201ENSMUST00000117512 906 ntBASIC28.6■■■□□ 2.17
Rtl1Q7M732 Gm43935-201ENSMUST00000203569 1050 ntBASIC28.6■■■□□ 2.17
Rtl1Q7M732 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC28.6■■■□□ 2.17
Rtl1Q7M732 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC28.6■■■□□ 2.17
Rtl1Q7M732 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Rtl1Q7M732 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Rtl1Q7M732 Gm37500-201ENSMUST00000192059 1443 ntBASIC28.6■■■□□ 2.17
Rtl1Q7M732 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Rtl1Q7M732 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Rtl1Q7M732 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
Rtl1Q7M732 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Rtl1Q7M732 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Rtl1Q7M732 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
Rtl1Q7M732 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC28.59■■■□□ 2.17
Rtl1Q7M732 Gm2308-201ENSMUST00000166539 1004 ntBASIC28.59■■■□□ 2.17
Rtl1Q7M732 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Rtl1Q7M732 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Rtl1Q7M732 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Rtl1Q7M732 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
Rtl1Q7M732 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Rtl1Q7M732 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
Rtl1Q7M732 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Rtl1Q7M732 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Rtl1Q7M732 Gm44729-201ENSMUST00000206759 2052 ntBASIC28.59■■■□□ 2.17
Rtl1Q7M732 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Rtl1Q7M732 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Rtl1Q7M732 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC28.58■■■□□ 2.17
Rtl1Q7M732 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Rtl1Q7M732 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Rtl1Q7M732 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
Rtl1Q7M732 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Rtl1Q7M732 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Rtl1Q7M732 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Rtl1Q7M732 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC28.58■■■□□ 2.17
Rtl1Q7M732 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.16
Rtl1Q7M732 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC28.57■■■□□ 2.16
Rtl1Q7M732 Gm5364-201ENSMUST00000216789 889 ntBASIC28.57■■■□□ 2.16
Rtl1Q7M732 Psmb5-202ENSMUST00000227257 622 ntBASIC28.57■■■□□ 2.16
Rtl1Q7M732 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Rtl1Q7M732 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Rtl1Q7M732 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Rtl1Q7M732 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Rtl1Q7M732 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Rtl1Q7M732 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Rtl1Q7M732 Gm1401-201ENSMUST00000122048 772 ntBASIC28.57■■■□□ 2.16
Rtl1Q7M732 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC28.57■■■□□ 2.16
Rtl1Q7M732 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Rtl1Q7M732 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Rtl1Q7M732 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Rtl1Q7M732 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC28.57■■■□□ 2.16
Rtl1Q7M732 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC28.56■■■□□ 2.16
Rtl1Q7M732 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Rtl1Q7M732 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
Rtl1Q7M732 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Rtl1Q7M732 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Rtl1Q7M732 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC28.56■■■□□ 2.16
Rtl1Q7M732 Gm19430-201ENSMUST00000193847 2137 ntBASIC28.56■■■□□ 2.16
Rtl1Q7M732 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC28.56■■■□□ 2.16
Rtl1Q7M732 AC158538.2-201ENSMUST00000225455 906 ntBASIC28.56■■■□□ 2.16
Rtl1Q7M732 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Rtl1Q7M732 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Rtl1Q7M732 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
Rtl1Q7M732 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC28.55■■■□□ 2.16
Rtl1Q7M732 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Rtl1Q7M732 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC28.55■■■□□ 2.16
Rtl1Q7M732 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Rtl1Q7M732 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
Rtl1Q7M732 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Rtl1Q7M732 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Rtl1Q7M732 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC28.55■■■□□ 2.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms