Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Uspl1Q3ULM6 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Uspl1Q3ULM6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC20.84■□□□□ 0.93
Uspl1Q3ULM6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Uspl1Q3ULM6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
Uspl1Q3ULM6 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Uspl1Q3ULM6 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Uspl1Q3ULM6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Uspl1Q3ULM6 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC20.84■□□□□ 0.93
Uspl1Q3ULM6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Uspl1Q3ULM6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Uspl1Q3ULM6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Uspl1Q3ULM6 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Uspl1Q3ULM6 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.84■□□□□ 0.93
Uspl1Q3ULM6 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.84■□□□□ 0.93
Uspl1Q3ULM6 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Uspl1Q3ULM6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Uspl1Q3ULM6 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Uspl1Q3ULM6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Uspl1Q3ULM6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Uspl1Q3ULM6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Uspl1Q3ULM6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Uspl1Q3ULM6 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Uspl1Q3ULM6 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Uspl1Q3ULM6 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Uspl1Q3ULM6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Uspl1Q3ULM6 Gm38327-201ENSMUST00000195852 1755 ntBASIC20.83■□□□□ 0.93
Uspl1Q3ULM6 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
Uspl1Q3ULM6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Uspl1Q3ULM6 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Uspl1Q3ULM6 Gm34391-201ENSMUST00000203706 907 ntBASIC20.83■□□□□ 0.93
Uspl1Q3ULM6 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Uspl1Q3ULM6 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Uspl1Q3ULM6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Uspl1Q3ULM6 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Uspl1Q3ULM6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Uspl1Q3ULM6 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Uspl1Q3ULM6 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Uspl1Q3ULM6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Uspl1Q3ULM6 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Uspl1Q3ULM6 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Uspl1Q3ULM6 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Uspl1Q3ULM6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Uspl1Q3ULM6 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Uspl1Q3ULM6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Uspl1Q3ULM6 Gm42918-201ENSMUST00000199249 1580 ntBASIC20.82■□□□□ 0.92
Uspl1Q3ULM6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Uspl1Q3ULM6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Uspl1Q3ULM6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Uspl1Q3ULM6 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Uspl1Q3ULM6 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.82■□□□□ 0.92
Uspl1Q3ULM6 Gm25745-201ENSMUST00000174945 133 ntBASIC20.82■□□□□ 0.92
Uspl1Q3ULM6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Uspl1Q3ULM6 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Uspl1Q3ULM6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Uspl1Q3ULM6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Uspl1Q3ULM6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Uspl1Q3ULM6 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC20.82■□□□□ 0.92
Uspl1Q3ULM6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Uspl1Q3ULM6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC20.82■□□□□ 0.92
Uspl1Q3ULM6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Uspl1Q3ULM6 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Uspl1Q3ULM6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Uspl1Q3ULM6 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Uspl1Q3ULM6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.81■□□□□ 0.92
Uspl1Q3ULM6 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Uspl1Q3ULM6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Uspl1Q3ULM6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Uspl1Q3ULM6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Uspl1Q3ULM6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Uspl1Q3ULM6 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Uspl1Q3ULM6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Uspl1Q3ULM6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Uspl1Q3ULM6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Uspl1Q3ULM6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Uspl1Q3ULM6 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Uspl1Q3ULM6 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Uspl1Q3ULM6 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Uspl1Q3ULM6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Uspl1Q3ULM6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Uspl1Q3ULM6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Uspl1Q3ULM6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Uspl1Q3ULM6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Uspl1Q3ULM6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Uspl1Q3ULM6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Uspl1Q3ULM6 Gm42473-201ENSMUST00000201056 2291 ntBASIC20.8■□□□□ 0.92
Uspl1Q3ULM6 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Uspl1Q3ULM6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Uspl1Q3ULM6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Uspl1Q3ULM6 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Uspl1Q3ULM6 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Uspl1Q3ULM6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Uspl1Q3ULM6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Uspl1Q3ULM6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Uspl1Q3ULM6 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Uspl1Q3ULM6 Birc2-201ENSMUST00000054878 378 ntBASIC20.79■□□□□ 0.92
Uspl1Q3ULM6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Uspl1Q3ULM6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Uspl1Q3ULM6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Uspl1Q3ULM6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms