Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC010469.2-201ENST00000496412 480 ntBASIC4.03□□□□□ -1.76
EPHB3P54753 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.03□□□□□ -1.76
EPHB3P54753 RNU6-840P-201ENST00000517275 65 ntBASIC4.03□□□□□ -1.76
EPHB3P54753 AL442163.3-201ENST00000554110 156 ntBASIC4.03□□□□□ -1.76
EPHB3P54753 MIR5187-201ENST00000583479 76 ntBASIC4.03□□□□□ -1.76
EPHB3P54753 AC010620.2-201ENST00000600135 313 ntBASIC4.03□□□□□ -1.76
EPHB3P54753 AP000787.2-201ENST00000604432 568 ntBASIC4.03□□□□□ -1.76
EPHB3P54753 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.03□□□□□ -1.76
EPHB3P54753 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.03□□□□□ -1.76
EPHB3P54753 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
EPHB3P54753 LINC02555-201ENST00000563933 1951 ntBASIC4.03□□□□□ -1.76
EPHB3P54753 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
EPHB3P54753 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.03□□□□□ -1.77
EPHB3P54753 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.03□□□□□ -1.77
EPHB3P54753 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
EPHB3P54753 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
EPHB3P54753 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
EPHB3P54753 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.02□□□□□ -1.77
EPHB3P54753 LINC02471-203ENST00000641941 4752 ntBASIC4.02□□□□□ -1.77
EPHB3P54753 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
EPHB3P54753 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
EPHB3P54753 RNU6-263P-201ENST00000363811 107 ntBASIC4.02□□□□□ -1.77
EPHB3P54753 RNU6-76P-201ENST00000384060 104 ntBASIC4.02□□□□□ -1.77
EPHB3P54753 RNU6-1179P-201ENST00000384667 107 ntBASIC4.02□□□□□ -1.77
EPHB3P54753 Y_RNA.581-201ENST00000391017 97 ntBASIC4.02□□□□□ -1.77
EPHB3P54753 RNA5SP44-201ENST00000410446 133 ntBASIC4.02□□□□□ -1.77
EPHB3P54753 RNU6-1140P-201ENST00000410517 106 ntBASIC4.02□□□□□ -1.77
EPHB3P54753 RNA5SP494-201ENST00000410653 129 ntBASIC4.02□□□□□ -1.77
EPHB3P54753 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.02□□□□□ -1.77
EPHB3P54753 AL445305.1-201ENST00000432577 575 ntBASIC4.02□□□□□ -1.77
EPHB3P54753 BX679664.1-201ENST00000434429 253 ntBASIC4.02□□□□□ -1.77
EPHB3P54753 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.02□□□□□ -1.77
EPHB3P54753 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
EPHB3P54753 AC022493.1-201ENST00000492984 337 ntBASIC4.02□□□□□ -1.77
EPHB3P54753 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.02□□□□□ -1.77
EPHB3P54753 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.02□□□□□ -1.77
EPHB3P54753 AL359273.1-201ENST00000510918 627 ntBASIC4.02□□□□□ -1.77
EPHB3P54753 APOOP4-201ENST00000513530 597 ntBASIC4.02□□□□□ -1.77
EPHB3P54753 MIR892C-201ENST00000516410 77 ntBASIC4.02□□□□□ -1.77
EPHB3P54753 SNORA25.14-201ENST00000516481 132 ntBASIC4.02□□□□□ -1.77
EPHB3P54753 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.02□□□□□ -1.77
EPHB3P54753 AC006077.1-201ENST00000604746 343 ntBASIC4.02□□□□□ -1.77
EPHB3P54753 MIR8076-201ENST00000611401 83 ntBASIC4.02□□□□□ -1.77
EPHB3P54753 AC034102.8-201ENST00000615146 484 ntBASIC4.02□□□□□ -1.77
EPHB3P54753 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.02□□□□□ -1.77
EPHB3P54753 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
EPHB3P54753 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.02□□□□□ -1.77
EPHB3P54753 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
EPHB3P54753 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
EPHB3P54753 RNA5SP119-201ENST00000362715 117 ntBASIC4.01□□□□□ -1.77
EPHB3P54753 U3.13-201ENST00000364804 214 ntBASIC4.01□□□□□ -1.77
EPHB3P54753 Y_RNA.439-201ENST00000384119 94 ntBASIC4.01□□□□□ -1.77
EPHB3P54753 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
EPHB3P54753 MTCYBP2-201ENST00000407745 171 ntBASIC4.01□□□□□ -1.77
EPHB3P54753 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.01□□□□□ -1.77
EPHB3P54753 AC091286.1-201ENST00000431233 461 ntBASIC4.01□□□□□ -1.77
EPHB3P54753 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.01□□□□□ -1.77
EPHB3P54753 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.01□□□□□ -1.77
EPHB3P54753 U8.21-201ENST00000459536 136 ntBASIC4.01□□□□□ -1.77
EPHB3P54753 AP000873.1-201ENST00000463987 400 ntBASIC4.01□□□□□ -1.77
EPHB3P54753 RPS15AP34-201ENST00000487776 387 ntBASIC4.01□□□□□ -1.77
EPHB3P54753 AC078817.1-201ENST00000492623 435 ntBASIC4.01□□□□□ -1.77
EPHB3P54753 AC025554.1-201ENST00000505641 188 ntBASIC4.01□□□□□ -1.77
EPHB3P54753 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.01□□□□□ -1.77
EPHB3P54753 RNU6-927P-201ENST00000516199 100 ntBASIC4.01□□□□□ -1.77
EPHB3P54753 Y_RNA.683-201ENST00000516508 93 ntBASIC4.01□□□□□ -1.77
EPHB3P54753 AC093023.1-201ENST00000547375 507 ntBASIC4.01□□□□□ -1.77
EPHB3P54753 SYF2P1-201ENST00000550658 413 ntBASIC4.01□□□□□ -1.77
EPHB3P54753 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.01□□□□□ -1.77
EPHB3P54753 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.01□□□□□ -1.77
EPHB3P54753 AC009314.1-201ENST00000603871 304 ntBASIC4.01□□□□□ -1.77
EPHB3P54753 AC009318.2-201ENST00000610917 651 ntBASIC4.01□□□□□ -1.77
EPHB3P54753 U2.14-201ENST00000615943 113 ntBASIC4.01□□□□□ -1.77
EPHB3P54753 AL391261.4-201ENST00000616012 481 ntBASIC4.01□□□□□ -1.77
EPHB3P54753 U6.92-201ENST00000636464 89 ntBASIC4.01□□□□□ -1.77
EPHB3P54753 AC009093.8-201ENST00000641769 292 ntBASIC4.01□□□□□ -1.77
EPHB3P54753 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
EPHB3P54753 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
EPHB3P54753 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
EPHB3P54753 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.01□□□□□ -1.77
EPHB3P54753 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.01□□□□□ -1.77
EPHB3P54753 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4□□□□□ -1.77
EPHB3P54753 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4□□□□□ -1.77
EPHB3P54753 MAPK10-372ENST00000641954 3413 ntBASIC4□□□□□ -1.77
EPHB3P54753 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
EPHB3P54753 MIR411-201ENST00000362239 96 ntBASIC4□□□□□ -1.77
EPHB3P54753 Y_RNA.16-201ENST00000362421 102 ntBASIC4□□□□□ -1.77
EPHB3P54753 MIR521-1-201ENST00000384902 87 ntBASIC4□□□□□ -1.77
EPHB3P54753 RNU6-837P-201ENST00000391056 108 ntBASIC4□□□□□ -1.77
EPHB3P54753 RNU6-712P-201ENST00000410558 100 ntBASIC4□□□□□ -1.77
EPHB3P54753 CRYBB2P1-203ENST00000415709 538 ntBASIC4□□□□□ -1.77
EPHB3P54753 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4□□□□□ -1.77
EPHB3P54753 AC013470.1-201ENST00000453438 462 ntBASIC4□□□□□ -1.77
EPHB3P54753 snoU13.22-201ENST00000459428 104 ntBASIC4□□□□□ -1.77
EPHB3P54753 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4□□□□□ -1.77
EPHB3P54753 RNU6-1315P-201ENST00000517187 99 ntBASIC4□□□□□ -1.77
EPHB3P54753 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4□□□□□ -1.77
EPHB3P54753 AC010186.2-204ENST00000537668 439 ntBASIC4□□□□□ -1.77
EPHB3P54753 AP002770.2-201ENST00000543613 532 ntBASIC4□□□□□ -1.77
EPHB3P54753 TRAV37-201ENST00000553906 342 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 269.1 ms