Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 MTCO1P53-201ENST00000441633 699 ntBASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 EEF1E1P1-201ENST00000446998 430 ntBASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 AL031313.1-201ENST00000448435 256 ntBASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 ATG12P2-201ENST00000456830 416 ntBASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 CYCSP2-201ENST00000558168 301 ntBASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 AC112220.3-201ENST00000605502 502 ntBASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 AC090186.1-201ENST00000605991 572 ntBASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 AC004908.2-201ENST00000609090 574 ntBASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 AC245297.2-201ENST00000610119 565 ntBASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 AC097478.2-201ENST00000610572 514 ntBASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 AC011939.3-201ENST00000613686 466 ntBASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 AC007742.2-201ENST00000618226 398 ntBASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 AL627230.5-201ENST00000619807 58 ntBASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 AC004808.1-201ENST00000627671 721 ntBASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 MIR6086-201ENST00000638065 55 ntBASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 TEX21P-201ENST00000447107 1476 ntBASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 SNORA23-201ENST00000365128 182 ntBASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 SEPT2P1-201ENST00000419651 180 ntBASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 MED14P1-201ENST00000430517 648 ntBASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 Z80107.1-201ENST00000436830 412 ntBASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 RNA5SP233-201ENST00000459153 113 ntBASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 AC087343.1-201ENST00000477341 475 ntBASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 RNA5SP384-201ENST00000516615 116 ntBASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 AC090888.1-201ENST00000561335 1141 ntBASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 AC025594.3-201ENST00000613068 790 ntBASIC1.54□□□□□ -2.16
SHANK3Q9BYB0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
SHANK3Q9BYB0 RNU6-884P-201ENST00000363889 107 ntBASIC1.53□□□□□ -2.16
SHANK3Q9BYB0 SNORA38-201ENST00000363946 132 ntBASIC1.53□□□□□ -2.16
SHANK3Q9BYB0 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
SHANK3Q9BYB0 SNORD23.1-201ENST00000408212 104 ntBASIC1.53□□□□□ -2.16
SHANK3Q9BYB0 RN7SKP51-201ENST00000410781 304 ntBASIC1.53□□□□□ -2.16
SHANK3Q9BYB0 UBE2FP1-201ENST00000416536 447 ntBASIC1.53□□□□□ -2.16
SHANK3Q9BYB0 DDX3P2-201ENST00000446138 111 ntBASIC1.53□□□□□ -2.16
SHANK3Q9BYB0 AC020550.1-201ENST00000447385 163 ntBASIC1.53□□□□□ -2.16
SHANK3Q9BYB0 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.53□□□□□ -2.16
SHANK3Q9BYB0 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.53□□□□□ -2.16
SHANK3Q9BYB0 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.53□□□□□ -2.16
SHANK3Q9BYB0 AC134050.1-201ENST00000495088 933 ntBASIC1.53□□□□□ -2.16
SHANK3Q9BYB0 MTCYBP35-201ENST00000503630 1137 ntBASIC1.53□□□□□ -2.16
SHANK3Q9BYB0 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.53□□□□□ -2.16
SHANK3Q9BYB0 RNU6-150P-201ENST00000516237 95 ntBASIC1.53□□□□□ -2.16
SHANK3Q9BYB0 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.53□□□□□ -2.16
SHANK3Q9BYB0 AC090079.2-201ENST00000575289 768 ntBASIC1.53□□□□□ -2.16
SHANK3Q9BYB0 MIR4509-3-201ENST00000578671 94 ntBASIC1.53□□□□□ -2.16
SHANK3Q9BYB0 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.53□□□□□ -2.16
SHANK3Q9BYB0 AC022662.1-201ENST00000580252 331 ntBASIC1.53□□□□□ -2.16
SHANK3Q9BYB0 MIR4509-2-201ENST00000583920 94 ntBASIC1.53□□□□□ -2.16
SHANK3Q9BYB0 AC096720.1-201ENST00000604441 183 ntBASIC1.53□□□□□ -2.16
SHANK3Q9BYB0 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.53□□□□□ -2.16
SHANK3Q9BYB0 MIR4509-1-201ENST00000618224 94 ntBASIC1.53□□□□□ -2.16
SHANK3Q9BYB0 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 SNORD56-201ENST00000413522 71 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 AC007919.1-201ENST00000429380 217 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 RPS15AP5-201ENST00000436276 388 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 COX7BP2-201ENST00000437976 242 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 EEF1A1P39-201ENST00000440791 250 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 RPL23AP35-201ENST00000451906 501 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 AC107626.1-201ENST00000471084 183 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 AC060771.1-201ENST00000582031 164 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 AC004805.2-201ENST00000605382 482 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 AL121652.1-201ENST00000608851 448 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 PART1_2.1-201ENST00000612397 250 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 AC107075.1-201ENST00000613695 314 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 AC006338.1-201ENST00000618453 749 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 AC006927.4-201ENST00000639187 543 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 RNU6-778P-201ENST00000363269 103 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 RNU6-621P-201ENST00000364752 109 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 RNU6-997P-201ENST00000384725 107 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 AL359704.1-201ENST00000411586 781 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 MTCO1P27-201ENST00000448269 226 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 FCF1P6-201ENST00000456841 595 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 RPF2P2-201ENST00000504693 896 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 AC093809.1-201ENST00000509155 340 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 IMMP1LP2-201ENST00000552954 492 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 HSBP1P1-201ENST00000555205 166 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 MIR4714-201ENST00000580728 77 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 AP000403.1-201ENST00000603349 851 ntBASIC1.52□□□□□ -2.17
SHANK3Q9BYB0 MTND5P30-201ENST00000452896 1731 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 180.5 ms