Protein–RNA interactions for Protein: Q12950

FOXD4, Forkhead box protein D4, humanhuman

Predicted RBP Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4Q12950 AC090517.2-201ENST00000614966 680 ntBASIC3.12□□□□□ -1.91
FOXD4Q12950 U4atac.1-201ENST00000618345 95 ntBASIC3.12□□□□□ -1.91
FOXD4Q12950 AC006386.2-201ENST00000624491 75 ntBASIC3.12□□□□□ -1.91
FOXD4Q12950 AC012005.1-201ENST00000624575 75 ntBASIC3.12□□□□□ -1.91
FOXD4Q12950 AL160394.1-201ENST00000624765 724 ntBASIC3.12□□□□□ -1.91
FOXD4Q12950 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
FOXD4Q12950 AL353743.1-202ENST00000431724 1695 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 AC108206.1-201ENST00000570186 4159 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 Y_RNA.33-201ENST00000362591 102 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 RNU6-1322P-201ENST00000364309 107 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 Y_RNA.255-201ENST00000364581 97 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 RNU6-715P-201ENST00000365204 103 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 RNU4-20P-201ENST00000365601 151 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 RNU1-138P-201ENST00000384093 164 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 Y_RNA.450-201ENST00000384198 113 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 RNU6-1179P-201ENST00000384667 107 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 MIR218-1-201ENST00000384999 110 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 AL353621.1-201ENST00000418219 243 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 USP9YP27-201ENST00000418455 438 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.11□□□□□ -1.91
FOXD4Q12950 RPL30P4-201ENST00000429309 333 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.11□□□□□ -1.91
FOXD4Q12950 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.11□□□□□ -1.91
FOXD4Q12950 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.11□□□□□ -1.91
FOXD4Q12950 ATP5C1P1-201ENST00000441945 895 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 RPL39P40-201ENST00000445481 146 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.11□□□□□ -1.91
FOXD4Q12950 AC092001.1-201ENST00000453012 261 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 AL356010.1-201ENST00000456364 102 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 RPL21P41-201ENST00000459863 264 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 GMFBP1-201ENST00000467831 427 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 AC083798.1-201ENST00000472671 131 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 AL163973.1-201ENST00000484753 577 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 FAM92A1P2-202ENST00000504766 877 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.11□□□□□ -1.91
FOXD4Q12950 AC116655.1-201ENST00000508324 901 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.11□□□□□ -1.91
FOXD4Q12950 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.11□□□□□ -1.91
FOXD4Q12950 TBCAP3-201ENST00000512475 312 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 AC112206.3-201ENST00000514578 389 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.11□□□□□ -1.91
FOXD4Q12950 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.11□□□□□ -1.91
FOXD4Q12950 AL133241.1-201ENST00000556832 487 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 AL157871.3-201ENST00000557231 293 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.11□□□□□ -1.91
FOXD4Q12950 CYCSP39-201ENST00000565821 309 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 MIR4325-201ENST00000583049 90 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 AC073539.2-201ENST00000597113 165 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 AP000907.4-201ENST00000604143 237 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 AC007014.2-201ENST00000615581 479 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 YWHAEP7-203ENST00000622054 312 ntBASIC3.11□□□□□ -1.91
FOXD4Q12950 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.11□□□□□ -1.91
FOXD4Q12950 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.11□□□□□ -1.91
FOXD4Q12950 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
FOXD4Q12950 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
FOXD4Q12950 RNU6-371P-201ENST00000364283 108 ntBASIC3.1□□□□□ -1.91
FOXD4Q12950 RNA5SP240-201ENST00000365355 128 ntBASIC3.1□□□□□ -1.91
FOXD4Q12950 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.1□□□□□ -1.91
FOXD4Q12950 MIR181A1-201ENST00000385026 110 ntBASIC3.1□□□□□ -1.91
FOXD4Q12950 SNORA40C-201ENST00000391285 128 ntBASIC3.1□□□□□ -1.91
FOXD4Q12950 AL139095.1-201ENST00000404326 391 ntBASIC3.1□□□□□ -1.91
FOXD4Q12950 Z98742.2-201ENST00000431564 187 ntBASIC3.1□□□□□ -1.91
FOXD4Q12950 AL139415.2-201ENST00000431968 163 ntBASIC3.1□□□□□ -1.91
FOXD4Q12950 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.1□□□□□ -1.91
FOXD4Q12950 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
FOXD4Q12950 AL583843.1-201ENST00000456070 346 ntBASIC3.1□□□□□ -1.91
FOXD4Q12950 SCARNA18-201ENST00000459004 134 ntBASIC3.1□□□□□ -1.91
FOXD4Q12950 snoU109.2-201ENST00000459316 135 ntBASIC3.1□□□□□ -1.91
FOXD4Q12950 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.1□□□□□ -1.91
FOXD4Q12950 CCDC34P1-201ENST00000507441 517 ntBASIC3.1□□□□□ -1.91
FOXD4Q12950 RNU5B-3P-201ENST00000516601 115 ntBASIC3.1□□□□□ -1.91
FOXD4Q12950 SNORA31.19-201ENST00000517079 126 ntBASIC3.1□□□□□ -1.91
FOXD4Q12950 AP003034.1-201ENST00000534621 422 ntBASIC3.1□□□□□ -1.91
FOXD4Q12950 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.1□□□□□ -1.91
FOXD4Q12950 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.1□□□□□ -1.91
FOXD4Q12950 AL118558.2-201ENST00000556294 238 ntBASIC3.1□□□□□ -1.91
FOXD4Q12950 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.1□□□□□ -1.91
FOXD4Q12950 AC136619.2-201ENST00000563361 631 ntBASIC3.1□□□□□ -1.91
FOXD4Q12950 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.1□□□□□ -1.91
FOXD4Q12950 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
FOXD4Q12950 AC015917.1-201ENST00000579654 510 ntBASIC3.1□□□□□ -1.91
FOXD4Q12950 AL645944.1-201ENST00000603857 493 ntBASIC3.1□□□□□ -1.91
FOXD4Q12950 AL138889.2-201ENST00000603883 242 ntBASIC3.1□□□□□ -1.91
FOXD4Q12950 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
FOXD4Q12950 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
FOXD4Q12950 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
FOXD4Q12950 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
FOXD4Q12950 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
FOXD4Q12950 RNU4-35P-201ENST00000362588 141 ntBASIC3.09□□□□□ -1.91
FOXD4Q12950 RNU2-63P-201ENST00000410792 194 ntBASIC3.09□□□□□ -1.91
FOXD4Q12950 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.09□□□□□ -1.91
FOXD4Q12950 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.09□□□□□ -1.91
FOXD4Q12950 AC097463.2-201ENST00000421074 142 ntBASIC3.09□□□□□ -1.91
FOXD4Q12950 COTL1P1-201ENST00000422309 375 ntBASIC3.09□□□□□ -1.91
FOXD4Q12950 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.09□□□□□ -1.91
FOXD4Q12950 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.09□□□□□ -1.91
FOXD4Q12950 AP001324.2-201ENST00000461163 319 ntBASIC3.09□□□□□ -1.91
FOXD4Q12950 AC069439.1-201ENST00000494739 167 ntBASIC3.09□□□□□ -1.91
FOXD4Q12950 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms