Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 RNA5SP139-201ENST00000364340 117 ntBASIC3.88□□□□□ -1.79
KLF4O43474 RNU1-101P-201ENST00000391171 127 ntBASIC3.88□□□□□ -1.79
KLF4O43474 SAR1AP2-201ENST00000392696 594 ntBASIC3.88□□□□□ -1.79
KLF4O43474 SNORA11-201ENST00000408789 128 ntBASIC3.88□□□□□ -1.79
KLF4O43474 RNU6-985P-201ENST00000410182 104 ntBASIC3.88□□□□□ -1.79
KLF4O43474 RNA5SP494-201ENST00000410653 129 ntBASIC3.88□□□□□ -1.79
KLF4O43474 RNA5SP39-201ENST00000411245 120 ntBASIC3.88□□□□□ -1.79
KLF4O43474 AL365496.1-201ENST00000426885 215 ntBASIC3.88□□□□□ -1.79
KLF4O43474 AL591419.1-201ENST00000427423 339 ntBASIC3.88□□□□□ -1.79
KLF4O43474 AL132765.1-201ENST00000434165 553 ntBASIC3.88□□□□□ -1.79
KLF4O43474 AC069285.2-201ENST00000440210 275 ntBASIC3.88□□□□□ -1.79
KLF4O43474 GPM6BP3-201ENST00000442797 145 ntBASIC3.88□□□□□ -1.79
KLF4O43474 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.88□□□□□ -1.79
KLF4O43474 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.88□□□□□ -1.79
KLF4O43474 AC091167.1-201ENST00000492017 396 ntBASIC3.88□□□□□ -1.79
KLF4O43474 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.88□□□□□ -1.79
KLF4O43474 AC021146.2-201ENST00000504736 556 ntBASIC3.88□□□□□ -1.79
KLF4O43474 RNU6-764P-201ENST00000516396 105 ntBASIC3.88□□□□□ -1.79
KLF4O43474 CYCSP29-201ENST00000533731 318 ntBASIC3.88□□□□□ -1.79
KLF4O43474 AC012603.1-201ENST00000606424 528 ntBASIC3.88□□□□□ -1.79
KLF4O43474 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.88□□□□□ -1.79
KLF4O43474 MIR1244-1-201ENST00000612829 85 ntBASIC3.88□□□□□ -1.79
KLF4O43474 AL445567.2-201ENST00000618935 498 ntBASIC3.88□□□□□ -1.79
KLF4O43474 XIST_intron.1-201ENST00000619444 68 ntBASIC3.88□□□□□ -1.79
KLF4O43474 AL162373.1-201ENST00000620433 407 ntBASIC3.88□□□□□ -1.79
KLF4O43474 MIR1244-3-201ENST00000635744 85 ntBASIC3.88□□□□□ -1.79
KLF4O43474 MIR1244-2-201ENST00000636449 85 ntBASIC3.88□□□□□ -1.79
KLF4O43474 MIR1244-4-202ENST00000636813 85 ntBASIC3.88□□□□□ -1.79
KLF4O43474 U6.98-201ENST00000637157 84 ntBASIC3.88□□□□□ -1.79
KLF4O43474 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
KLF4O43474 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
KLF4O43474 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
KLF4O43474 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.88□□□□□ -1.79
KLF4O43474 MTND5P1-201ENST00000445440 1375 ntBASIC3.88□□□□□ -1.79
KLF4O43474 AC006504.1-201ENST00000562493 3666 ntBASIC3.88□□□□□ -1.79
KLF4O43474 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
KLF4O43474 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
KLF4O43474 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.87□□□□□ -1.79
KLF4O43474 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.87□□□□□ -1.79
KLF4O43474 SNORD32A-201ENST00000364805 84 ntBASIC3.87□□□□□ -1.79
KLF4O43474 Y_RNA.389-201ENST00000383924 113 ntBASIC3.87□□□□□ -1.79
KLF4O43474 RNU6-622P-201ENST00000384272 103 ntBASIC3.87□□□□□ -1.79
KLF4O43474 Y_RNA.504-201ENST00000384481 104 ntBASIC3.87□□□□□ -1.79
KLF4O43474 SNORA12.2-201ENST00000391040 156 ntBASIC3.87□□□□□ -1.79
KLF4O43474 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
KLF4O43474 SNORA11F-201ENST00000408237 128 ntBASIC3.87□□□□□ -1.79
KLF4O43474 RN7SKP61-201ENST00000410642 295 ntBASIC3.87□□□□□ -1.79
KLF4O43474 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.87□□□□□ -1.79
KLF4O43474 MTCO3P19-201ENST00000415864 321 ntBASIC3.87□□□□□ -1.79
KLF4O43474 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.87□□□□□ -1.79
KLF4O43474 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.87□□□□□ -1.79
KLF4O43474 snoU13.30-201ENST00000458951 104 ntBASIC3.87□□□□□ -1.79
KLF4O43474 HMGN1P10-201ENST00000474557 553 ntBASIC3.87□□□□□ -1.79
KLF4O43474 RPL30P12-201ENST00000474666 353 ntBASIC3.87□□□□□ -1.79
KLF4O43474 AP001025.1-201ENST00000486139 332 ntBASIC3.87□□□□□ -1.79
KLF4O43474 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.87□□□□□ -1.79
KLF4O43474 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.87□□□□□ -1.79
KLF4O43474 SNORA40.14-201ENST00000516543 86 ntBASIC3.87□□□□□ -1.79
KLF4O43474 RNU4-77P-201ENST00000516692 156 ntBASIC3.87□□□□□ -1.79
KLF4O43474 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.87□□□□□ -1.79
KLF4O43474 AC007224.1-201ENST00000564410 144 ntBASIC3.87□□□□□ -1.79
KLF4O43474 MIR3160-1-201ENST00000577972 85 ntBASIC3.87□□□□□ -1.79
KLF4O43474 VN1R91P-201ENST00000594377 169 ntBASIC3.87□□□□□ -1.79
KLF4O43474 RPL23AP78-201ENST00000599928 470 ntBASIC3.87□□□□□ -1.79
KLF4O43474 AL391813.1-201ENST00000603098 260 ntBASIC3.87□□□□□ -1.79
KLF4O43474 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.87□□□□□ -1.79
KLF4O43474 ARF4P1-201ENST00000605447 541 ntBASIC3.87□□□□□ -1.79
KLF4O43474 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.87□□□□□ -1.79
KLF4O43474 AC243829.7-201ENST00000633081 225 ntBASIC3.87□□□□□ -1.79
KLF4O43474 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
KLF4O43474 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
KLF4O43474 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
KLF4O43474 AC006971.1-201ENST00000407916 4486 ntBASIC3.87□□□□□ -1.79
KLF4O43474 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.86□□□□□ -1.79
KLF4O43474 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
KLF4O43474 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.86□□□□□ -1.79
KLF4O43474 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.86□□□□□ -1.79
KLF4O43474 MIR331-201ENST00000362302 94 ntBASIC3.86□□□□□ -1.79
KLF4O43474 SNORD114-19-201ENST00000363072 75 ntBASIC3.86□□□□□ -1.79
KLF4O43474 RNU1-132P-201ENST00000364300 164 ntBASIC3.86□□□□□ -1.79
KLF4O43474 RNU4-56P-201ENST00000364700 142 ntBASIC3.86□□□□□ -1.79
KLF4O43474 RNU4-42P-201ENST00000364738 142 ntBASIC3.86□□□□□ -1.79
KLF4O43474 RNA5SP366-201ENST00000365454 123 ntBASIC3.86□□□□□ -1.79
KLF4O43474 Y_RNA.405-201ENST00000383979 100 ntBASIC3.86□□□□□ -1.79
KLF4O43474 Y_RNA.451-201ENST00000384200 100 ntBASIC3.86□□□□□ -1.79
KLF4O43474 Y_RNA.524-201ENST00000384564 100 ntBASIC3.86□□□□□ -1.79
KLF4O43474 Y_RNA.561-201ENST00000384694 100 ntBASIC3.86□□□□□ -1.79
KLF4O43474 MIR190B-201ENST00000401119 79 ntBASIC3.86□□□□□ -1.79
KLF4O43474 MTHFD2P2-201ENST00000407725 247 ntBASIC3.86□□□□□ -1.79
KLF4O43474 MIR1193-201ENST00000408109 78 ntBASIC3.86□□□□□ -1.79
KLF4O43474 RNA5SP306-201ENST00000411087 107 ntBASIC3.86□□□□□ -1.79
KLF4O43474 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.86□□□□□ -1.79
KLF4O43474 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.86□□□□□ -1.79
KLF4O43474 AC244670.1-201ENST00000436879 112 ntBASIC3.86□□□□□ -1.79
KLF4O43474 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.86□□□□□ -1.79
KLF4O43474 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.86□□□□□ -1.79
KLF4O43474 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.86□□□□□ -1.79
KLF4O43474 AC105137.1-201ENST00000484355 562 ntBASIC3.86□□□□□ -1.79
KLF4O43474 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.86□□□□□ -1.79
KLF4O43474 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 202.3 ms