Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 AC091544.4-201ENST00000555268 342 ntBASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 AC026271.5-201ENST00000577873 130 ntBASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 RPL30P11-203ENST00000598995 310 ntBASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 AC243960.4-201ENST00000600532 288 ntBASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 AC098614.4-201ENST00000607601 462 ntBASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 Y_RNA.783-201ENST00000613546 102 ntBASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 AC021755.4-201ENST00000616620 456 ntBASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 AC092656.1-203ENST00000624134 423 ntBASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 AC103706.2-201ENST00000638080 240 ntBASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
CCNB1IP1Q9NPC3 AC092104.1-201ENST00000497346 1441 ntBASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 RNU6-946P-201ENST00000383878 107 ntBASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 SNORA67.3-201ENST00000384366 140 ntBASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 AC016831.2-201ENST00000417179 352 ntBASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 MTND1P32-201ENST00000433043 938 ntBASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 RPL23AP6-201ENST00000446637 472 ntBASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 AC093899.1-201ENST00000457984 376 ntBASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 HSPE1P23-201ENST00000509838 286 ntBASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 RPL23AP94-201ENST00000512518 302 ntBASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 RANP3-201ENST00000530970 276 ntBASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 OR5AL2P-201ENST00000532185 920 ntBASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 IMMP1LP2-201ENST00000552954 492 ntBASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 AC073410.2-201ENST00000603240 332 ntBASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 SNRPGP17-201ENST00000603780 214 ntBASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 ELOCP5-201ENST00000604924 333 ntBASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 AL139022.2-201ENST00000606934 443 ntBASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 MIR15A-201ENST00000607334 83 ntBASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 AL139418.1-201ENST00000613613 177 ntBASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 AL356266.1-201ENST00000623311 483 ntBASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 AC110994.2-201ENST00000635481 492 ntBASIC1.77□□□□□ -2.13
CCNB1IP1Q9NPC3 RBBP8P1-201ENST00000449447 1844 ntBASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 Y_RNA.302-201ENST00000364997 102 ntBASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 RNU6-190P-201ENST00000384154 102 ntBASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 AL023284.1-201ENST00000403956 276 ntBASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 AL137159.1-201ENST00000452808 512 ntBASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 RNU6-586P-201ENST00000517265 104 ntBASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 AC109329.1-201ENST00000518744 317 ntBASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 AC107934.1-201ENST00000522215 217 ntBASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 IGKV3-31-201ENST00000523109 329 ntBASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 AC135279.1-201ENST00000543493 504 ntBASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 AC025678.1-201ENST00000567861 338 ntBASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 BNIP3P40-201ENST00000596017 556 ntBASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 AL078605.1-201ENST00000603529 500 ntBASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 AL022154.1-201ENST00000604698 785 ntBASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 AL773524.1-201ENST00000614065 229 ntBASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.76□□□□□ -2.13
CCNB1IP1Q9NPC3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CCNB1IP1Q9NPC3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CCNB1IP1Q9NPC3 RNU6-942P-201ENST00000363002 107 ntBASIC1.75□□□□□ -2.13
CCNB1IP1Q9NPC3 Y_RNA.97-201ENST00000363094 102 ntBASIC1.75□□□□□ -2.13
CCNB1IP1Q9NPC3 RNU6-487P-201ENST00000365430 104 ntBASIC1.75□□□□□ -2.13
CCNB1IP1Q9NPC3 RNU6-843P-201ENST00000384454 104 ntBASIC1.75□□□□□ -2.13
CCNB1IP1Q9NPC3 RNU2-48P-201ENST00000410694 191 ntBASIC1.75□□□□□ -2.13
CCNB1IP1Q9NPC3 AL139156.1-201ENST00000412785 841 ntBASIC1.75□□□□□ -2.13
CCNB1IP1Q9NPC3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.75□□□□□ -2.13
CCNB1IP1Q9NPC3 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.75□□□□□ -2.13
CCNB1IP1Q9NPC3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.75□□□□□ -2.13
CCNB1IP1Q9NPC3 AL008629.1-201ENST00000438615 184 ntBASIC1.75□□□□□ -2.13
CCNB1IP1Q9NPC3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.75□□□□□ -2.13
CCNB1IP1Q9NPC3 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.75□□□□□ -2.13
CCNB1IP1Q9NPC3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.75□□□□□ -2.13
CCNB1IP1Q9NPC3 AL136380.1-201ENST00000447970 162 ntBASIC1.75□□□□□ -2.13
CCNB1IP1Q9NPC3 AC119751.4-201ENST00000507498 357 ntBASIC1.75□□□□□ -2.13
CCNB1IP1Q9NPC3 RNU2-10P-201ENST00000516375 211 ntBASIC1.75□□□□□ -2.13
CCNB1IP1Q9NPC3 HSPE1P18-201ENST00000517602 280 ntBASIC1.75□□□□□ -2.13
CCNB1IP1Q9NPC3 AC092325.1-201ENST00000566449 554 ntBASIC1.75□□□□□ -2.13
CCNB1IP1Q9NPC3 AC093249.1-201ENST00000567049 203 ntBASIC1.75□□□□□ -2.13
CCNB1IP1Q9NPC3 MIR5089-201ENST00000580047 84 ntBASIC1.75□□□□□ -2.13
CCNB1IP1Q9NPC3 MIR4648-201ENST00000580107 72 ntBASIC1.75□□□□□ -2.13
CCNB1IP1Q9NPC3 AC021646.1-201ENST00000605469 484 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 192.5 ms