Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 Y_RNA.136-201ENST00000363444 102 ntBASIC4.58□□□□□ -1.68
NFKB1P19838 Y_RNA.446-201ENST00000384178 104 ntBASIC4.58□□□□□ -1.68
NFKB1P19838 MIR585-201ENST00000384887 94 ntBASIC4.58□□□□□ -1.68
NFKB1P19838 SNORA46.1-201ENST00000391069 153 ntBASIC4.58□□□□□ -1.68
NFKB1P19838 SDHCP2-201ENST00000398565 501 ntBASIC4.58□□□□□ -1.68
NFKB1P19838 RNU2-51P-201ENST00000410708 197 ntBASIC4.58□□□□□ -1.68
NFKB1P19838 BMS1P22-201ENST00000414726 313 ntBASIC4.58□□□□□ -1.68
NFKB1P19838 AL390729.2-201ENST00000416137 156 ntBASIC4.58□□□□□ -1.68
NFKB1P19838 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.58□□□□□ -1.68
NFKB1P19838 KC877373.1-201ENST00000479066 408 ntBASIC4.58□□□□□ -1.68
NFKB1P19838 AC108022.1-201ENST00000493466 478 ntBASIC4.58□□□□□ -1.68
NFKB1P19838 RNU6-1219P-201ENST00000516143 112 ntBASIC4.58□□□□□ -1.68
NFKB1P19838 RNA5SP291-201ENST00000517222 105 ntBASIC4.58□□□□□ -1.68
NFKB1P19838 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.58□□□□□ -1.68
NFKB1P19838 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.58□□□□□ -1.68
NFKB1P19838 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NFKB1P19838 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NFKB1P19838 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.58□□□□□ -1.68
NFKB1P19838 AC073349.3-201ENST00000617616 186 ntBASIC4.58□□□□□ -1.68
NFKB1P19838 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NFKB1P19838 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.58□□□□□ -1.68
NFKB1P19838 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
NFKB1P19838 AL592437.2-201ENST00000421655 2434 ntBASIC4.58□□□□□ -1.68
NFKB1P19838 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
NFKB1P19838 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
NFKB1P19838 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NFKB1P19838 AL353743.1-202ENST00000431724 1695 ntBASIC4.57□□□□□ -1.68
NFKB1P19838 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NFKB1P19838 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NFKB1P19838 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.57□□□□□ -1.68
NFKB1P19838 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NFKB1P19838 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.57□□□□□ -1.68
NFKB1P19838 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.57□□□□□ -1.68
NFKB1P19838 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.57□□□□□ -1.68
NFKB1P19838 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.57□□□□□ -1.68
NFKB1P19838 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NFKB1P19838 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
NFKB1P19838 SNORD113.2-201ENST00000364166 89 ntBASIC4.57□□□□□ -1.68
NFKB1P19838 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.57□□□□□ -1.68
NFKB1P19838 SNORA70F-201ENST00000384142 135 ntBASIC4.57□□□□□ -1.68
NFKB1P19838 AL133270.1-201ENST00000402635 279 ntBASIC4.57□□□□□ -1.68
NFKB1P19838 AC009237.10-201ENST00000414112 510 ntBASIC4.57□□□□□ -1.68
NFKB1P19838 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.57□□□□□ -1.68
NFKB1P19838 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.57□□□□□ -1.68
NFKB1P19838 AC073264.2-201ENST00000448886 166 ntBASIC4.57□□□□□ -1.68
NFKB1P19838 AC012671.1-201ENST00000451912 203 ntBASIC4.57□□□□□ -1.68
NFKB1P19838 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.57□□□□□ -1.68
NFKB1P19838 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.57□□□□□ -1.68
NFKB1P19838 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.57□□□□□ -1.68
NFKB1P19838 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.57□□□□□ -1.68
NFKB1P19838 AL049830.2-201ENST00000480072 201 ntBASIC4.57□□□□□ -1.68
NFKB1P19838 RPS23P1-201ENST00000491662 432 ntBASIC4.57□□□□□ -1.68
NFKB1P19838 RNU6-567P-201ENST00000516746 107 ntBASIC4.57□□□□□ -1.68
NFKB1P19838 LINC00901.1-201ENST00000617252 152 ntBASIC4.57□□□□□ -1.68
NFKB1P19838 IGHVIII-44-202ENST00000636235 289 ntBASIC4.57□□□□□ -1.68
NFKB1P19838 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.57□□□□□ -1.68
NFKB1P19838 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NFKB1P19838 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.57□□□□□ -1.68
NFKB1P19838 AL592182.3-201ENST00000642132 3304 ntBASIC4.57□□□□□ -1.68
NFKB1P19838 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NFKB1P19838 AP001273.1-201ENST00000624493 3152 ntBASIC4.57□□□□□ -1.68
NFKB1P19838 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NFKB1P19838 RNA5SP443-201ENST00000363083 132 ntBASIC4.56□□□□□ -1.68
NFKB1P19838 RNVU1-6-201ENST00000364688 164 ntBASIC4.56□□□□□ -1.68
NFKB1P19838 Y_RNA.441-201ENST00000384123 112 ntBASIC4.56□□□□□ -1.68
NFKB1P19838 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NFKB1P19838 RNA5SP372-201ENST00000390836 115 ntBASIC4.56□□□□□ -1.68
NFKB1P19838 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.56□□□□□ -1.68
NFKB1P19838 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.56□□□□□ -1.68
NFKB1P19838 AC244098.2-201ENST00000422068 99 ntBASIC4.56□□□□□ -1.68
NFKB1P19838 NUTF2P7-201ENST00000453086 375 ntBASIC4.56□□□□□ -1.68
NFKB1P19838 RN7SL817P-201ENST00000480777 288 ntBASIC4.56□□□□□ -1.68
NFKB1P19838 RPL31P13-201ENST00000484151 370 ntBASIC4.56□□□□□ -1.68
NFKB1P19838 BTF3L4P4-201ENST00000506381 449 ntBASIC4.56□□□□□ -1.68
NFKB1P19838 SNORA43.2-201ENST00000516652 128 ntBASIC4.56□□□□□ -1.68
NFKB1P19838 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.56□□□□□ -1.68
NFKB1P19838 MIR4308-201ENST00000580634 81 ntBASIC4.56□□□□□ -1.68
NFKB1P19838 AC008749.1-201ENST00000597650 306 ntBASIC4.56□□□□□ -1.68
NFKB1P19838 AC024153.1-201ENST00000603103 365 ntBASIC4.56□□□□□ -1.68
NFKB1P19838 AL160290.3-201ENST00000604869 165 ntBASIC4.56□□□□□ -1.68
NFKB1P19838 MIR6780A-201ENST00000615089 68 ntBASIC4.56□□□□□ -1.68
NFKB1P19838 uc_338.18-201ENST00000615451 175 ntBASIC4.56□□□□□ -1.68
NFKB1P19838 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.56□□□□□ -1.68
NFKB1P19838 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.56□□□□□ -1.68
NFKB1P19838 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
NFKB1P19838 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
NFKB1P19838 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.56□□□□□ -1.68
NFKB1P19838 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NFKB1P19838 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NFKB1P19838 AL079305.1-201ENST00000623159 3008 ntBASIC4.56□□□□□ -1.68
NFKB1P19838 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NFKB1P19838 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NFKB1P19838 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
NFKB1P19838 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.55□□□□□ -1.68
NFKB1P19838 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.55□□□□□ -1.68
NFKB1P19838 Y_RNA.81-201ENST00000362997 102 ntBASIC4.55□□□□□ -1.68
NFKB1P19838 RNU6-626P-201ENST00000363354 107 ntBASIC4.55□□□□□ -1.68
NFKB1P19838 RNU6-527P-201ENST00000363425 104 ntBASIC4.55□□□□□ -1.68
NFKB1P19838 RNU1-44P-201ENST00000384453 163 ntBASIC4.55□□□□□ -1.68
NFKB1P19838 U3.37-201ENST00000408528 213 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 218.5 ms